Protein–RNA interactions for Protein: A4QN01

LINC01553, Putative uncharacterized protein encoded by LINC01553, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01553A4QN01 SNORD11B-201ENST00000607707 90 ntBASIC2.23□□□□□ -2.05
LINC01553A4QN01 AC062037.2-201ENST00000610137 73 ntBASIC2.23□□□□□ -2.05
LINC01553A4QN01 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC01553A4QN01 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
LINC01553A4QN01 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01553A4QN01 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01553A4QN01 Y_RNA.230-201ENST00000364348 109 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 Y_RNA.288-201ENST00000364854 92 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 Y_RNA.307-201ENST00000365022 117 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
LINC01553A4QN01 RNU2-38P-201ENST00000410856 79 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 Y_RNA.618-201ENST00000410949 107 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 AL139156.1-201ENST00000412785 841 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 AC139712.2-201ENST00000424302 339 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 RAB28P5-201ENST00000427490 651 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 CBX3P6-201ENST00000430257 527 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 HSPE1P25-201ENST00000455484 251 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 SNORD127-201ENST00000458892 86 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 RNU6-625P-201ENST00000459412 107 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 TRBVB-201ENST00000477100 408 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 RPS23P5-201ENST00000495419 428 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01553A4QN01 MTND1P19-201ENST00000511780 315 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 RNU6-1098P-201ENST00000516772 96 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 RNU2-44P-201ENST00000516795 194 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC01553A4QN01 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01553A4QN01 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC01553A4QN01 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01553A4QN01 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01553A4QN01 Y_RNA.783-201ENST00000613546 102 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 AC068205.3-201ENST00000636385 468 ntBASIC2.22□□□□□ -2.05
LINC01553A4QN01 Z82209.1-201ENST00000422141 2135 ntBASIC2.21□□□□□ -2.06
LINC01553A4QN01 SNORD81.1-201ENST00000363064 77 ntBASIC2.21□□□□□ -2.06
LINC01553A4QN01 RNU6-626P-201ENST00000363354 107 ntBASIC2.21□□□□□ -2.06
LINC01553A4QN01 SNORD113-8-201ENST00000363497 74 ntBASIC2.21□□□□□ -2.06
LINC01553A4QN01 Y_RNA.286-201ENST00000364813 102 ntBASIC2.21□□□□□ -2.06
LINC01553A4QN01 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
LINC01553A4QN01 Y_RNA.541-201ENST00000384640 113 ntBASIC2.21□□□□□ -2.06
LINC01553A4QN01 MIR627-201ENST00000384979 97 ntBASIC2.21□□□□□ -2.06
LINC01553A4QN01 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
LINC01553A4QN01 SNORA40.18-201ENST00000391200 128 ntBASIC2.21□□□□□ -2.06
LINC01553A4QN01 MIR1287-201ENST00000408492 90 ntBASIC2.21□□□□□ -2.06
LINC01553A4QN01 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC01553A4QN01 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC01553A4QN01 ATP5EP1-201ENST00000510257 156 ntBASIC2.21□□□□□ -2.06
LINC01553A4QN01 MIR449C-201ENST00000516047 92 ntBASIC2.21□□□□□ -2.06
LINC01553A4QN01 RNA5SP182-201ENST00000516064 82 ntBASIC2.21□□□□□ -2.06
LINC01553A4QN01 RNU6-966P-201ENST00000516479 104 ntBASIC2.21□□□□□ -2.06
LINC01553A4QN01 SNORA48.11-201ENST00000517015 89 ntBASIC2.21□□□□□ -2.06
LINC01553A4QN01 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC01553A4QN01 AC110588.1-201ENST00000559699 137 ntBASIC2.21□□□□□ -2.06
LINC01553A4QN01 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC01553A4QN01 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC01553A4QN01 AC010615.1-201ENST00000594254 1764 ntBASIC2.21□□□□□ -2.06
LINC01553A4QN01 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LINC01553A4QN01 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.2□□□□□ -2.06
LINC01553A4QN01 Z82195.2-201ENST00000612348 18351 ntBASIC2.2□□□□□ -2.06
LINC01553A4QN01 MIR6073-201ENST00000352083 89 ntBASIC2.2□□□□□ -2.06
LINC01553A4QN01 RNU1-23P-201ENST00000363361 144 ntBASIC2.2□□□□□ -2.06
LINC01553A4QN01 SNORD87-201ENST00000364849 89 ntBASIC2.2□□□□□ -2.06
LINC01553A4QN01 RNU1-109P-201ENST00000383960 147 ntBASIC2.2□□□□□ -2.06
LINC01553A4QN01 AL033519.2-201ENST00000403958 392 ntBASIC2.2□□□□□ -2.06
LINC01553A4QN01 RNA5SP492-201ENST00000411330 114 ntBASIC2.2□□□□□ -2.06
LINC01553A4QN01 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01553A4QN01 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01553A4QN01 RNU6-1132P-201ENST00000459214 107 ntBASIC2.2□□□□□ -2.06
LINC01553A4QN01 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01553A4QN01 Y_RNA.680-201ENST00000516441 93 ntBASIC2.2□□□□□ -2.06
LINC01553A4QN01 MIR3616-201ENST00000584070 92 ntBASIC2.2□□□□□ -2.06
LINC01553A4QN01 AL356280.1-201ENST00000603614 379 ntBASIC2.2□□□□□ -2.06
LINC01553A4QN01 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.2□□□□□ -2.06
LINC01553A4QN01 MIR335-201ENST00000362173 94 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 Y_RNA.14-201ENST00000362415 103 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 Y_RNA.16-201ENST00000362421 102 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 RNU6-234P-201ENST00000365229 104 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 RNU6-1264P-201ENST00000383891 107 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 MIR1294-201ENST00000408503 142 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 RNU4-30P-201ENST00000410245 143 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 RNA5SP181-201ENST00000410246 98 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 RNU2-48P-201ENST00000410694 191 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 RNU5A-5P-201ENST00000411054 116 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.19□□□□□ -2.06
LINC01553A4QN01 AC096920.1-201ENST00000423991 241 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 AL161788.1-201ENST00000441805 169 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 HMGN2P9-201ENST00000476875 229 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC01553A4QN01 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.19□□□□□ -2.06
LINC01553A4QN01 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.19□□□□□ -2.06
LINC01553A4QN01 AC005176.2-201ENST00000596933 147 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 AL109918.3-201ENST00000603072 338 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 AC022441.3-201ENST00000605737 136 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 snoU13.31-201ENST00000607291 104 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 MIR5739-201ENST00000619803 80 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 AC010297.1-201ENST00000623948 149 ntBASIC2.19□□□□□ -2.06
LINC01553A4QN01 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.19□□□□□ -2.06
LINC01553A4QN01 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.19□□□□□ -2.06
LINC01553A4QN01 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
LINC01553A4QN01 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms