Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC196A0A1B0GTZ2 SUB1P4-201ENST00000566062 339 ntBASIC2.06□□□□□ -2.08
CCDC196A0A1B0GTZ2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CCDC196A0A1B0GTZ2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CCDC196A0A1B0GTZ2 Y_RNA.287-201ENST00000364853 94 ntBASIC2.05□□□□□ -2.08
CCDC196A0A1B0GTZ2 RNU6-1145P-201ENST00000384246 107 ntBASIC2.05□□□□□ -2.08
CCDC196A0A1B0GTZ2 Y_RNA.579-201ENST00000390939 94 ntBASIC2.05□□□□□ -2.08
CCDC196A0A1B0GTZ2 RNA5SP323-201ENST00000391094 133 ntBASIC2.05□□□□□ -2.08
CCDC196A0A1B0GTZ2 SNORD12B-201ENST00000410433 91 ntBASIC2.05□□□□□ -2.08
CCDC196A0A1B0GTZ2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC196A0A1B0GTZ2 RNU6-625P-201ENST00000459412 107 ntBASIC2.05□□□□□ -2.08
CCDC196A0A1B0GTZ2 snoU13.26-201ENST00000459452 105 ntBASIC2.05□□□□□ -2.08
CCDC196A0A1B0GTZ2 RPS29P11-201ENST00000496507 171 ntBASIC2.05□□□□□ -2.08
CCDC196A0A1B0GTZ2 SNORA40.9-201ENST00000515895 93 ntBASIC2.05□□□□□ -2.08
CCDC196A0A1B0GTZ2 RN7SKP49-201ENST00000516675 260 ntBASIC2.05□□□□□ -2.08
CCDC196A0A1B0GTZ2 SNORA31.17-201ENST00000516953 127 ntBASIC2.05□□□□□ -2.08
CCDC196A0A1B0GTZ2 AC024614.2-201ENST00000577584 372 ntBASIC2.05□□□□□ -2.08
CCDC196A0A1B0GTZ2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.05□□□□□ -2.08
CCDC196A0A1B0GTZ2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC196A0A1B0GTZ2 RNU4-79P-201ENST00000362764 141 ntBASIC2.04□□□□□ -2.08
CCDC196A0A1B0GTZ2 Y_RNA.428-201ENST00000384078 102 ntBASIC2.04□□□□□ -2.08
CCDC196A0A1B0GTZ2 Y_RNA.463-201ENST00000384271 102 ntBASIC2.04□□□□□ -2.08
CCDC196A0A1B0GTZ2 RNA5SP467-201ENST00000391274 118 ntBASIC2.04□□□□□ -2.08
CCDC196A0A1B0GTZ2 AC022028.1-201ENST00000412054 408 ntBASIC2.04□□□□□ -2.08
CCDC196A0A1B0GTZ2 RPS20P15-201ENST00000412792 311 ntBASIC2.04□□□□□ -2.08
CCDC196A0A1B0GTZ2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.04□□□□□ -2.08
CCDC196A0A1B0GTZ2 AC099799.1-201ENST00000439809 192 ntBASIC2.04□□□□□ -2.08
CCDC196A0A1B0GTZ2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC196A0A1B0GTZ2 NDUFB4P10-201ENST00000452541 359 ntBASIC2.04□□□□□ -2.08
CCDC196A0A1B0GTZ2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC196A0A1B0GTZ2 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC196A0A1B0GTZ2 RNU6-295P-201ENST00000516901 104 ntBASIC2.04□□□□□ -2.08
CCDC196A0A1B0GTZ2 SNORD116.3-201ENST00000517176 78 ntBASIC2.04□□□□□ -2.08
CCDC196A0A1B0GTZ2 AC018448.1-201ENST00000552843 316 ntBASIC2.04□□□□□ -2.08
CCDC196A0A1B0GTZ2 DEFB122-202ENST00000569013 197 ntBASIC2.04□□□□□ -2.08
CCDC196A0A1B0GTZ2 AC104985.2-201ENST00000620598 500 ntBASIC2.04□□□□□ -2.08
CCDC196A0A1B0GTZ2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.04□□□□□ -2.08
CCDC196A0A1B0GTZ2 AL356292.1-201ENST00000283110 373 ntBASIC2.03□□□□□ -2.08
CCDC196A0A1B0GTZ2 RNU6-112P-201ENST00000363599 104 ntBASIC2.03□□□□□ -2.08
CCDC196A0A1B0GTZ2 Y_RNA.419-201ENST00000384041 102 ntBASIC2.03□□□□□ -2.08
CCDC196A0A1B0GTZ2 RNU6-439P-201ENST00000384188 106 ntBASIC2.03□□□□□ -2.08
CCDC196A0A1B0GTZ2 SNORA26.9-201ENST00000391322 122 ntBASIC2.03□□□□□ -2.08
CCDC196A0A1B0GTZ2 RNU6-1186P-201ENST00000410429 97 ntBASIC2.03□□□□□ -2.08
CCDC196A0A1B0GTZ2 ELOCP21-201ENST00000412558 336 ntBASIC2.03□□□□□ -2.08
CCDC196A0A1B0GTZ2 CST2P1-201ENST00000425770 87 ntBASIC2.03□□□□□ -2.08
CCDC196A0A1B0GTZ2 AL121890.1-201ENST00000435457 205 ntBASIC2.03□□□□□ -2.08
CCDC196A0A1B0GTZ2 RNU7-152P-201ENST00000458982 64 ntBASIC2.03□□□□□ -2.08
CCDC196A0A1B0GTZ2 AC027575.1-201ENST00000481064 460 ntBASIC2.03□□□□□ -2.08
CCDC196A0A1B0GTZ2 AC084364.2-201ENST00000546924 395 ntBASIC2.03□□□□□ -2.08
CCDC196A0A1B0GTZ2 LARP7P1-201ENST00000605576 316 ntBASIC2.03□□□□□ -2.08
CCDC196A0A1B0GTZ2 MIR6845-201ENST00000613182 61 ntBASIC2.03□□□□□ -2.08
CCDC196A0A1B0GTZ2 U2.1-201ENST00000618978 145 ntBASIC2.03□□□□□ -2.08
CCDC196A0A1B0GTZ2 AC084768.2-201ENST00000622736 221 ntBASIC2.03□□□□□ -2.08
CCDC196A0A1B0GTZ2 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC196A0A1B0GTZ2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC196A0A1B0GTZ2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC196A0A1B0GTZ2 RNU6-1019P-201ENST00000364424 107 ntBASIC2.02□□□□□ -2.09
CCDC196A0A1B0GTZ2 RNU4-42P-201ENST00000364738 142 ntBASIC2.02□□□□□ -2.09
CCDC196A0A1B0GTZ2 MIR1261-201ENST00000408659 82 ntBASIC2.02□□□□□ -2.09
CCDC196A0A1B0GTZ2 TOMM22P2-201ENST00000430735 237 ntBASIC2.02□□□□□ -2.09
CCDC196A0A1B0GTZ2 AC245047.4-201ENST00000433189 144 ntBASIC2.02□□□□□ -2.09
CCDC196A0A1B0GTZ2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC196A0A1B0GTZ2 RNU6-408P-201ENST00000515910 100 ntBASIC2.02□□□□□ -2.09
CCDC196A0A1B0GTZ2 CYCSP23-201ENST00000519781 313 ntBASIC2.02□□□□□ -2.09
CCDC196A0A1B0GTZ2 MIR4713-201ENST00000582691 75 ntBASIC2.02□□□□□ -2.09
CCDC196A0A1B0GTZ2 AL117336.2-201ENST00000602435 335 ntBASIC2.02□□□□□ -2.09
CCDC196A0A1B0GTZ2 AL133255.1-201ENST00000606374 441 ntBASIC2.02□□□□□ -2.09
CCDC196A0A1B0GTZ2 AL353149.1-201ENST00000610667 244 ntBASIC2.02□□□□□ -2.09
CCDC196A0A1B0GTZ2 AC010615.1-201ENST00000594254 1764 ntBASIC2.02□□□□□ -2.09
CCDC196A0A1B0GTZ2 RNU6-1264P-201ENST00000383891 107 ntBASIC2.01□□□□□ -2.09
CCDC196A0A1B0GTZ2 RNU6-708P-201ENST00000384217 107 ntBASIC2.01□□□□□ -2.09
CCDC196A0A1B0GTZ2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CCDC196A0A1B0GTZ2 AC009310.1-201ENST00000414414 451 ntBASIC2.01□□□□□ -2.09
CCDC196A0A1B0GTZ2 AF228730.4-201ENST00000421457 183 ntBASIC2.01□□□□□ -2.09
CCDC196A0A1B0GTZ2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.01□□□□□ -2.09
CCDC196A0A1B0GTZ2 AC007677.1-201ENST00000445757 515 ntBASIC2.01□□□□□ -2.09
CCDC196A0A1B0GTZ2 RPL23AP63-201ENST00000498752 471 ntBASIC2.01□□□□□ -2.09
CCDC196A0A1B0GTZ2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.01□□□□□ -2.09
CCDC196A0A1B0GTZ2 MIR2355-201ENST00000517199 87 ntBASIC2.01□□□□□ -2.09
CCDC196A0A1B0GTZ2 AC006600.1-201ENST00000572529 153 ntBASIC2.01□□□□□ -2.09
CCDC196A0A1B0GTZ2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC196A0A1B0GTZ2 MIR4298-201ENST00000584380 73 ntBASIC2.01□□□□□ -2.09
CCDC196A0A1B0GTZ2 AC116312.1-201ENST00000606841 314 ntBASIC2.01□□□□□ -2.09
CCDC196A0A1B0GTZ2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2□□□□□ -2.09
CCDC196A0A1B0GTZ2 RNU6-1115P-201ENST00000362490 106 ntBASIC2□□□□□ -2.09
CCDC196A0A1B0GTZ2 Y_RNA.315-201ENST00000365117 102 ntBASIC2□□□□□ -2.09
CCDC196A0A1B0GTZ2 MIR520A-201ENST00000384862 85 ntBASIC2□□□□□ -2.09
CCDC196A0A1B0GTZ2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2□□□□□ -2.09
CCDC196A0A1B0GTZ2 CHEK2P4-201ENST00000450340 246 ntBASIC2□□□□□ -2.09
CCDC196A0A1B0GTZ2 RNU6-250P-201ENST00000516958 103 ntBASIC2□□□□□ -2.09
CCDC196A0A1B0GTZ2 RNA5SP437-201ENST00000517249 129 ntBASIC2□□□□□ -2.09
CCDC196A0A1B0GTZ2 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2□□□□□ -2.09
CCDC196A0A1B0GTZ2 AC023157.2-201ENST00000540596 141 ntBASIC2□□□□□ -2.09
CCDC196A0A1B0GTZ2 HSBP1P1-201ENST00000555205 166 ntBASIC2□□□□□ -2.09
CCDC196A0A1B0GTZ2 MIR4255-201ENST00000579351 72 ntBASIC2□□□□□ -2.09
CCDC196A0A1B0GTZ2 AC011476.5-201ENST00000615594 130 ntBASIC2□□□□□ -2.09
CCDC196A0A1B0GTZ2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2□□□□□ -2.09
CCDC196A0A1B0GTZ2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC196A0A1B0GTZ2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC196A0A1B0GTZ2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms