Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 Y_RNA.257-201ENST00000364596 102 ntBASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 Y_RNA.269-201ENST00000364685 89 ntBASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 RNU6-1289P-201ENST00000384431 106 ntBASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 MIR1262-201ENST00000408276 93 ntBASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 Y_RNA.590-201ENST00000410140 107 ntBASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 RNU6-855P-201ENST00000410395 104 ntBASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 RNU6-651P-201ENST00000411040 105 ntBASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 RNU6-847P-201ENST00000411115 108 ntBASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 RNA5SP508-201ENST00000411327 119 ntBASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 AL357134.1-201ENST00000445848 426 ntBASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 AC010598.1-201ENST00000510378 103 ntBASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 SNORA70.12-201ENST00000516084 153 ntBASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 RNU2-34P-201ENST00000516534 121 ntBASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 CYCSP26-201ENST00000534107 320 ntBASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 AC026271.5-201ENST00000577873 130 ntBASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 MIR3684-201ENST00000579779 74 ntBASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 MIR3668-201ENST00000582138 75 ntBASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 AL162424.1-201ENST00000602325 221 ntBASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC163A0A0D9SF12 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC163A0A0D9SF12 AL159152.1-201ENST00000635019 2587 ntBASIC2.91□□□□□ -1.94
CCDC163A0A0D9SF12 Y_RNA.124-201ENST00000363339 93 ntBASIC2.91□□□□□ -1.94
CCDC163A0A0D9SF12 SNORA67.1-201ENST00000364749 141 ntBASIC2.91□□□□□ -1.94
CCDC163A0A0D9SF12 RNU6-805P-201ENST00000365643 106 ntBASIC2.91□□□□□ -1.94
CCDC163A0A0D9SF12 MIR1261-201ENST00000408659 82 ntBASIC2.91□□□□□ -1.94
CCDC163A0A0D9SF12 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC163A0A0D9SF12 HMGN2P34-201ENST00000437647 269 ntBASIC2.91□□□□□ -1.94
CCDC163A0A0D9SF12 SNORD109B-201ENST00000458961 67 ntBASIC2.91□□□□□ -1.94
CCDC163A0A0D9SF12 SNORD109A-201ENST00000459128 67 ntBASIC2.91□□□□□ -1.94
CCDC163A0A0D9SF12 RPS27P22-201ENST00000478056 241 ntBASIC2.91□□□□□ -1.94
CCDC163A0A0D9SF12 RN7SL499P-201ENST00000481141 276 ntBASIC2.91□□□□□ -1.94
CCDC163A0A0D9SF12 AC010409.1-201ENST00000487382 476 ntBASIC2.91□□□□□ -1.94
CCDC163A0A0D9SF12 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC163A0A0D9SF12 AC091544.4-201ENST00000555268 342 ntBASIC2.91□□□□□ -1.94
CCDC163A0A0D9SF12 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC163A0A0D9SF12 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC163A0A0D9SF12 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC163A0A0D9SF12 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.9□□□□□ -1.94
CCDC163A0A0D9SF12 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CCDC163A0A0D9SF12 Y_RNA.275-201ENST00000364726 110 ntBASIC2.9□□□□□ -1.95
CCDC163A0A0D9SF12 MIR196B-201ENST00000384852 84 ntBASIC2.9□□□□□ -1.95
CCDC163A0A0D9SF12 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CCDC163A0A0D9SF12 RNU6-710P-201ENST00000410424 105 ntBASIC2.9□□□□□ -1.95
CCDC163A0A0D9SF12 RNA5SP293-201ENST00000410527 113 ntBASIC2.9□□□□□ -1.95
CCDC163A0A0D9SF12 EDDM3CP-201ENST00000415977 425 ntBASIC2.9□□□□□ -1.95
CCDC163A0A0D9SF12 AC244505.4-201ENST00000434905 287 ntBASIC2.9□□□□□ -1.95
CCDC163A0A0D9SF12 SSXP5-201ENST00000443473 287 ntBASIC2.9□□□□□ -1.95
CCDC163A0A0D9SF12 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.9□□□□□ -1.95
CCDC163A0A0D9SF12 RNU6-1041P-201ENST00000516254 102 ntBASIC2.9□□□□□ -1.95
CCDC163A0A0D9SF12 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC163A0A0D9SF12 AC141273.2-201ENST00000618989 130 ntBASIC2.9□□□□□ -1.95
CCDC163A0A0D9SF12 AL355596.1-201ENST00000565399 3996 ntBASIC2.9□□□□□ -1.95
CCDC163A0A0D9SF12 AC009487.2-201ENST00000420969 6821 ntBASIC2.9□□□□□ -1.95
CCDC163A0A0D9SF12 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC163A0A0D9SF12 Y_RNA.99-201ENST00000363138 105 ntBASIC2.89□□□□□ -1.95
CCDC163A0A0D9SF12 SNORD114-6-201ENST00000364393 72 ntBASIC2.89□□□□□ -1.95
CCDC163A0A0D9SF12 Y_RNA.341-201ENST00000365341 102 ntBASIC2.89□□□□□ -1.95
CCDC163A0A0D9SF12 RPL21P3-201ENST00000395517 478 ntBASIC2.89□□□□□ -1.95
CCDC163A0A0D9SF12 RNA5SP274-201ENST00000410484 108 ntBASIC2.89□□□□□ -1.95
CCDC163A0A0D9SF12 RNU2-61P-201ENST00000411069 191 ntBASIC2.89□□□□□ -1.95
CCDC163A0A0D9SF12 AC060773.1-201ENST00000421698 310 ntBASIC2.89□□□□□ -1.95
CCDC163A0A0D9SF12 AC245102.2-201ENST00000448956 180 ntBASIC2.89□□□□□ -1.95
CCDC163A0A0D9SF12 AC010401.1-201ENST00000463867 348 ntBASIC2.89□□□□□ -1.95
CCDC163A0A0D9SF12 RNU6-794P-201ENST00000517261 64 ntBASIC2.89□□□□□ -1.95
CCDC163A0A0D9SF12 AL590808.1-201ENST00000618696 141 ntBASIC2.89□□□□□ -1.95
CCDC163A0A0D9SF12 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 MIR340-201ENST00000362125 95 ntBASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 RNU6-859P-201ENST00000362728 107 ntBASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 RNU6-160P-201ENST00000384591 107 ntBASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 MIR181A2-201ENST00000384863 110 ntBASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 AC016909.1-201ENST00000415916 166 ntBASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 BTF3P11-201ENST00000426582 477 ntBASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 AL513328.1-201ENST00000446460 224 ntBASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 SUMO1P2-201ENST00000452524 304 ntBASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 RN7SL20P-201ENST00000488827 297 ntBASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 RNA5SP20-201ENST00000515976 84 ntBASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 AC079600.2-201ENST00000550076 130 ntBASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 AC007318.2-201ENST00000620999 243 ntBASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CCDC163A0A0D9SF12 AC009487.4-201ENST00000624969 3585 ntBASIC2.87□□□□□ -1.95
CCDC163A0A0D9SF12 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC163A0A0D9SF12 SNORA27.1-201ENST00000362604 124 ntBASIC2.87□□□□□ -1.95
CCDC163A0A0D9SF12 RNU6-271P-201ENST00000363858 105 ntBASIC2.87□□□□□ -1.95
CCDC163A0A0D9SF12 SNORA70B-201ENST00000384210 135 ntBASIC2.87□□□□□ -1.95
CCDC163A0A0D9SF12 RNU6-136P-201ENST00000384663 107 ntBASIC2.87□□□□□ -1.95
CCDC163A0A0D9SF12 RNU6-417P-201ENST00000384712 107 ntBASIC2.87□□□□□ -1.95
CCDC163A0A0D9SF12 MIR873-201ENST00000401120 77 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms