Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 HMGN1P18-201ENST00000457642 277 ntBASIC3.49□□□□□ -1.85
SNCAIPQ9Y6H5 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.49□□□□□ -1.85
SNCAIPQ9Y6H5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.49□□□□□ -1.85
SNCAIPQ9Y6H5 RN7SKP164-201ENST00000516138 266 ntBASIC3.49□□□□□ -1.85
SNCAIPQ9Y6H5 AC104027.1-201ENST00000521887 300 ntBASIC3.49□□□□□ -1.85
SNCAIPQ9Y6H5 AC069294.1-201ENST00000608397 350 ntBASIC3.49□□□□□ -1.85
SNCAIPQ9Y6H5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SNCAIPQ9Y6H5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 snoU2_19.4-201ENST00000364329 80 ntBASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 RNU6-275P-201ENST00000364910 107 ntBASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 Y_RNA.400-201ENST00000383963 111 ntBASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 Y_RNA.572-201ENST00000384757 98 ntBASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 MIR626-201ENST00000385032 94 ntBASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 RNU7-14P-201ENST00000459331 62 ntBASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 RNA5SP112-201ENST00000515937 99 ntBASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 SNORA70.12-201ENST00000516084 153 ntBASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 MIR4744-201ENST00000581563 82 ntBASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 Y_RNA.802-201ENST00000614892 130 ntBASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 AC091895.1-201ENST00000624494 256 ntBASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 MIR7153-201ENST00000637758 57 ntBASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SNCAIPQ9Y6H5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 RNU6-151P-201ENST00000364158 107 ntBASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 Y_RNA.310-201ENST00000365063 113 ntBASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 Y_RNA.456-201ENST00000384232 111 ntBASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 CR769767.1-201ENST00000436337 346 ntBASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 AC005840.1-201ENST00000498412 377 ntBASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 AC093331.1-201ENST00000521474 169 ntBASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 UCA1.1-201ENST00000620952 75 ntBASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 AC007318.2-201ENST00000620999 243 ntBASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 AC073476.4-201ENST00000628409 72 ntBASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 AC096644.4-201ENST00000563417 2912 ntBASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 AP003122.5-201ENST00000527668 3766 ntBASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNCAIPQ9Y6H5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
SNCAIPQ9Y6H5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 Y_RNA.215-201ENST00000364204 112 ntBASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 RNU6-1081P-201ENST00000384537 107 ntBASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 RNU6-851P-201ENST00000384565 107 ntBASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 RNU6-578P-201ENST00000390980 103 ntBASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 RNU6-131P-201ENST00000391144 107 ntBASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 MIR1294-201ENST00000408503 142 ntBASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 MIR1185-2-201ENST00000408687 86 ntBASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 RPS12P18-201ENST00000442381 270 ntBASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 RNU7-141P-201ENST00000459304 62 ntBASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 RPS29P12-201ENST00000460178 152 ntBASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 HMGN2P9-201ENST00000476875 229 ntBASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 MRPS36P2-201ENST00000512569 299 ntBASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 SCARNA17.1-201ENST00000516211 143 ntBASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 SCARNA17.2-201ENST00000516334 143 ntBASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 SNORD116-25-201ENST00000516517 92 ntBASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 AC025754.2-201ENST00000606491 432 ntBASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 SCARNA17.4-201ENST00000614296 143 ntBASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SNCAIPQ9Y6H5 GABRG2-229ENST00000641017 3628 ntBASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 FAM35CP-201ENST00000554755 2470 ntBASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 RNU6-1205P-201ENST00000363625 106 ntBASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 RNU6-103P-201ENST00000363686 107 ntBASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 RNU6-818P-201ENST00000364837 108 ntBASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 RNU6-805P-201ENST00000365643 106 ntBASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 AL355497.1-201ENST00000406262 551 ntBASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 RNA5SP293-201ENST00000410527 113 ntBASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 EBAG9P1-201ENST00000418955 543 ntBASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 AC063976.3-201ENST00000426849 329 ntBASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 AC087499.2-201ENST00000432861 149 ntBASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 HSPE1P21-201ENST00000438283 308 ntBASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 RN7SL20P-201ENST00000488827 297 ntBASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 AC107294.3-201ENST00000609211 526 ntBASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SNCAIPQ9Y6H5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 216 ms