Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 RNU6-414P-201ENST00000363705 104 ntBASIC1.41□□□□□ -2.18
USP16Q9Y5T5 RNU6-1019P-201ENST00000364424 107 ntBASIC1.41□□□□□ -2.18
USP16Q9Y5T5 RNU6-593P-201ENST00000364716 112 ntBASIC1.41□□□□□ -2.18
USP16Q9Y5T5 RNU6-418P-201ENST00000384035 107 ntBASIC1.41□□□□□ -2.18
USP16Q9Y5T5 RNU6-306P-201ENST00000384617 107 ntBASIC1.41□□□□□ -2.18
USP16Q9Y5T5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
USP16Q9Y5T5 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.41□□□□□ -2.18
USP16Q9Y5T5 C8orf59P1-201ENST00000429930 303 ntBASIC1.41□□□□□ -2.18
USP16Q9Y5T5 MTCO3P29-201ENST00000432119 779 ntBASIC1.41□□□□□ -2.18
USP16Q9Y5T5 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.41□□□□□ -2.18
USP16Q9Y5T5 AC011406.1-201ENST00000512440 370 ntBASIC1.41□□□□□ -2.18
USP16Q9Y5T5 AL137100.2-201ENST00000555786 315 ntBASIC1.41□□□□□ -2.18
USP16Q9Y5T5 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.41□□□□□ -2.18
USP16Q9Y5T5 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.41□□□□□ -2.18
USP16Q9Y5T5 MIR4790-201ENST00000577799 79 ntBASIC1.41□□□□□ -2.18
USP16Q9Y5T5 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.41□□□□□ -2.18
USP16Q9Y5T5 PRR13P7-201ENST00000605538 430 ntBASIC1.41□□□□□ -2.18
USP16Q9Y5T5 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.41□□□□□ -2.18
USP16Q9Y5T5 RNU6-112P-201ENST00000363599 104 ntBASIC1.4□□□□□ -2.19
USP16Q9Y5T5 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
USP16Q9Y5T5 MIR150-201ENST00000385048 84 ntBASIC1.4□□□□□ -2.19
USP16Q9Y5T5 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.4□□□□□ -2.19
USP16Q9Y5T5 RNU2-7P-201ENST00000410794 178 ntBASIC1.4□□□□□ -2.19
USP16Q9Y5T5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.4□□□□□ -2.19
USP16Q9Y5T5 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.4□□□□□ -2.19
USP16Q9Y5T5 AC005908.1-201ENST00000468701 347 ntBASIC1.4□□□□□ -2.19
USP16Q9Y5T5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.4□□□□□ -2.19
USP16Q9Y5T5 RNU4-49P-201ENST00000516080 140 ntBASIC1.4□□□□□ -2.19
USP16Q9Y5T5 RNU6-1041P-201ENST00000516254 102 ntBASIC1.4□□□□□ -2.19
USP16Q9Y5T5 RNU6-58P-201ENST00000517143 103 ntBASIC1.4□□□□□ -2.19
USP16Q9Y5T5 AF235103.2-201ENST00000525753 346 ntBASIC1.4□□□□□ -2.19
USP16Q9Y5T5 AL590705.4-201ENST00000532209 134 ntBASIC1.4□□□□□ -2.19
USP16Q9Y5T5 AC011604.1-201ENST00000545978 196 ntBASIC1.4□□□□□ -2.19
USP16Q9Y5T5 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.4□□□□□ -2.19
USP16Q9Y5T5 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.4□□□□□ -2.19
USP16Q9Y5T5 MIR5696-201ENST00000578474 85 ntBASIC1.4□□□□□ -2.19
USP16Q9Y5T5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.4□□□□□ -2.19
USP16Q9Y5T5 MIR8074-201ENST00000615081 81 ntBASIC1.4□□□□□ -2.19
USP16Q9Y5T5 AC007014.2-201ENST00000615581 479 ntBASIC1.4□□□□□ -2.19
USP16Q9Y5T5 U6atac.1-201ENST00000616025 117 ntBASIC1.4□□□□□ -2.19
USP16Q9Y5T5 AC009248.2-201ENST00000619826 254 ntBASIC1.4□□□□□ -2.19
USP16Q9Y5T5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.4□□□□□ -2.19
USP16Q9Y5T5 AC068205.3-201ENST00000636385 468 ntBASIC1.4□□□□□ -2.19
USP16Q9Y5T5 AC010615.1-201ENST00000594254 1764 ntBASIC1.39□□□□□ -2.19
USP16Q9Y5T5 RNU6-862P-201ENST00000362804 105 ntBASIC1.39□□□□□ -2.19
USP16Q9Y5T5 RNU6-17P-201ENST00000384245 107 ntBASIC1.39□□□□□ -2.19
USP16Q9Y5T5 RNU6-18P-201ENST00000384527 107 ntBASIC1.39□□□□□ -2.19
USP16Q9Y5T5 MIR549A-201ENST00000385268 96 ntBASIC1.39□□□□□ -2.19
USP16Q9Y5T5 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
USP16Q9Y5T5 AL356776.1-201ENST00000406574 447 ntBASIC1.39□□□□□ -2.19
USP16Q9Y5T5 MIR1253-201ENST00000408273 105 ntBASIC1.39□□□□□ -2.19
USP16Q9Y5T5 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.39□□□□□ -2.19
USP16Q9Y5T5 AC243428.1-201ENST00000421099 264 ntBASIC1.39□□□□□ -2.19
USP16Q9Y5T5 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.39□□□□□ -2.19
USP16Q9Y5T5 RNU7-57P-201ENST00000459540 60 ntBASIC1.39□□□□□ -2.19
USP16Q9Y5T5 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.39□□□□□ -2.19
USP16Q9Y5T5 SNORA25.14-201ENST00000516481 132 ntBASIC1.39□□□□□ -2.19
USP16Q9Y5T5 RNU6-1016P-201ENST00000516689 94 ntBASIC1.39□□□□□ -2.19
USP16Q9Y5T5 AC060780.3-201ENST00000589464 80 ntBASIC1.39□□□□□ -2.19
USP16Q9Y5T5 AC080078.2-201ENST00000603766 501 ntBASIC1.39□□□□□ -2.19
USP16Q9Y5T5 MIR6128-201ENST00000615528 109 ntBASIC1.39□□□□□ -2.19
USP16Q9Y5T5 snoZ196.1-201ENST00000625269 89 ntBASIC1.39□□□□□ -2.19
USP16Q9Y5T5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.39□□□□□ -2.19
USP16Q9Y5T5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
USP16Q9Y5T5 AC091812.1-201ENST00000432235 1948 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 MIR373-201ENST00000362273 69 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 snoU2-30.2-201ENST00000362805 70 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 Y_RNA.86-201ENST00000363020 111 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 AC004866.1-201ENST00000411748 78 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.38□□□□□ -2.19
USP16Q9Y5T5 MTND1P4-201ENST00000435196 415 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 NDUFB4P10-201ENST00000452541 359 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 SNORD5.1-201ENST00000458800 75 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 RNU6-329P-201ENST00000459618 107 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 RPL30P10-201ENST00000488148 337 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 RNU6-1088P-201ENST00000516850 104 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 Y_RNA.706-201ENST00000516933 99 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 RNU1-117P-201ENST00000517041 158 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 AC027288.2-201ENST00000553028 243 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 AL160236.1-201ENST00000556317 195 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.38□□□□□ -2.19
USP16Q9Y5T5 SNORD114-21-201ENST00000606412 72 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 AC100812.1-201ENST00000607622 580 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.38□□□□□ -2.19
USP16Q9Y5T5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.38□□□□□ -2.19
USP16Q9Y5T5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
USP16Q9Y5T5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
USP16Q9Y5T5 U3.8-201ENST00000363675 217 ntBASIC1.37□□□□□ -2.19
USP16Q9Y5T5 Y_RNA.301-201ENST00000364990 103 ntBASIC1.37□□□□□ -2.19
USP16Q9Y5T5 RNU6-793P-201ENST00000384233 104 ntBASIC1.37□□□□□ -2.19
USP16Q9Y5T5 RNU6-1148P-201ENST00000410992 104 ntBASIC1.37□□□□□ -2.19
USP16Q9Y5T5 RNU6-57P-201ENST00000411348 103 ntBASIC1.37□□□□□ -2.19
USP16Q9Y5T5 AL591704.2-201ENST00000421658 181 ntBASIC1.37□□□□□ -2.19
USP16Q9Y5T5 AC060773.1-201ENST00000421698 310 ntBASIC1.37□□□□□ -2.19
USP16Q9Y5T5 AC099677.2-201ENST00000436385 175 ntBASIC1.37□□□□□ -2.19
USP16Q9Y5T5 Z82188.1-201ENST00000436709 154 ntBASIC1.37□□□□□ -2.19
USP16Q9Y5T5 RNA5SP384-201ENST00000516615 116 ntBASIC1.37□□□□□ -2.19
USP16Q9Y5T5 MIR4742-201ENST00000581069 85 ntBASIC1.37□□□□□ -2.19
USP16Q9Y5T5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms