Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 TOMM22P2-201ENST00000430735 237 ntBASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 RNU6-966P-201ENST00000516479 104 ntBASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 RNU6-965P-201ENST00000516721 96 ntBASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 AC055872.1-201ENST00000570978 278 ntBASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 AC004467.1-201ENST00000615678 330 ntBASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 RNU1-23P-201ENST00000363361 144 ntBASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 RNU6-1175P-201ENST00000365200 107 ntBASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 RNU6-290P-201ENST00000365212 101 ntBASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 Y_RNA.352-201ENST00000365439 102 ntBASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 AL590004.2-201ENST00000404787 371 ntBASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 RNU6-651P-201ENST00000411040 105 ntBASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 RPL19P1-201ENST00000411635 428 ntBASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 HMGN2P18-201ENST00000450680 270 ntBASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 RN7SKP40-201ENST00000517211 242 ntBASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 AC090616.3-201ENST00000582184 217 ntBASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 AC022441.3-201ENST00000605737 136 ntBASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 U4atac.1-201ENST00000618345 95 ntBASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 MIR1248-201ENST00000629190 106 ntBASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
PCDHB1Q9Y5F3 RNU6-545P-201ENST00000362681 104 ntBASIC2.73□□□□□ -1.97
PCDHB1Q9Y5F3 Y_RNA.76-201ENST00000362931 109 ntBASIC2.73□□□□□ -1.97
PCDHB1Q9Y5F3 RNA5SP125-201ENST00000364843 120 ntBASIC2.73□□□□□ -1.97
PCDHB1Q9Y5F3 RNA5SP492-201ENST00000411330 114 ntBASIC2.73□□□□□ -1.97
PCDHB1Q9Y5F3 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.73□□□□□ -1.97
PCDHB1Q9Y5F3 AL121890.1-201ENST00000435457 205 ntBASIC2.73□□□□□ -1.97
PCDHB1Q9Y5F3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.73□□□□□ -1.97
PCDHB1Q9Y5F3 AC104389.3-201ENST00000445629 235 ntBASIC2.73□□□□□ -1.97
PCDHB1Q9Y5F3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.73□□□□□ -1.97
PCDHB1Q9Y5F3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.73□□□□□ -1.97
PCDHB1Q9Y5F3 AC006380.1-201ENST00000603598 186 ntBASIC2.73□□□□□ -1.97
PCDHB1Q9Y5F3 AC006001.4-201ENST00000622243 395 ntBASIC2.73□□□□□ -1.97
PCDHB1Q9Y5F3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PCDHB1Q9Y5F3 Y_RNA.150-201ENST00000363562 102 ntBASIC2.72□□□□□ -1.97
PCDHB1Q9Y5F3 RNU1-112P-201ENST00000364401 164 ntBASIC2.72□□□□□ -1.97
PCDHB1Q9Y5F3 PIGPP3-201ENST00000425307 415 ntBASIC2.72□□□□□ -1.97
PCDHB1Q9Y5F3 AC005042.3-201ENST00000453230 174 ntBASIC2.72□□□□□ -1.97
PCDHB1Q9Y5F3 PRELID3BP1-201ENST00000457142 540 ntBASIC2.72□□□□□ -1.97
PCDHB1Q9Y5F3 AC016925.1-201ENST00000458303 298 ntBASIC2.72□□□□□ -1.97
PCDHB1Q9Y5F3 HMGN2P9-201ENST00000476875 229 ntBASIC2.72□□□□□ -1.97
PCDHB1Q9Y5F3 YWHAEP4-201ENST00000505390 198 ntBASIC2.72□□□□□ -1.97
PCDHB1Q9Y5F3 ATP5EP1-201ENST00000510257 156 ntBASIC2.72□□□□□ -1.97
PCDHB1Q9Y5F3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.72□□□□□ -1.97
PCDHB1Q9Y5F3 AC008413.1-201ENST00000511864 177 ntBASIC2.72□□□□□ -1.97
PCDHB1Q9Y5F3 SERF1AP1-201ENST00000514575 187 ntBASIC2.72□□□□□ -1.97
PCDHB1Q9Y5F3 RNA5SP490-201ENST00000517141 136 ntBASIC2.72□□□□□ -1.97
PCDHB1Q9Y5F3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.72□□□□□ -1.97
PCDHB1Q9Y5F3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.72□□□□□ -1.97
PCDHB1Q9Y5F3 MIR3684-201ENST00000579779 74 ntBASIC2.72□□□□□ -1.97
PCDHB1Q9Y5F3 U2.14-201ENST00000615943 113 ntBASIC2.72□□□□□ -1.97
PCDHB1Q9Y5F3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.72□□□□□ -1.97
PCDHB1Q9Y5F3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 RNU6-859P-201ENST00000362728 107 ntBASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 Y_RNA.297-201ENST00000364950 91 ntBASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 Y_RNA.331-201ENST00000365267 102 ntBASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 Y_RNA.446-201ENST00000384178 104 ntBASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 MIR548B-201ENST00000385247 97 ntBASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 SNORD58.1-201ENST00000391313 66 ntBASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 AL603908.1-201ENST00000406098 201 ntBASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 RNU2-54P-201ENST00000410299 190 ntBASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 AL139156.1-201ENST00000412785 841 ntBASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 RNU6-948P-201ENST00000516374 107 ntBASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 AC127459.3-201ENST00000624328 466 ntBASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
PCDHB1Q9Y5F3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 Y_RNA.117-201ENST00000363294 101 ntBASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 RNY1-201ENST00000364228 113 ntBASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 SNORA25B-201ENST00000365507 128 ntBASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 RNU1-109P-201ENST00000383960 147 ntBASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 SNORA53-201ENST00000391141 249 ntBASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 AL138827.1-201ENST00000402666 306 ntBASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 MIR1185-2-201ENST00000408687 86 ntBASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 RNA5SP21-201ENST00000410917 96 ntBASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 AC009238.1-201ENST00000442165 424 ntBASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 AC009237.6-201ENST00000446969 424 ntBASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 AL137159.1-201ENST00000452808 512 ntBASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 RNU7-57P-201ENST00000459540 60 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms