Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 U3.8-201ENST00000363675 217 ntBASIC0.84□□□□□ -2.27
LRRC42Q9Y546 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.84□□□□□ -2.27
LRRC42Q9Y546 Y_RNA.415-201ENST00000384012 112 ntBASIC0.84□□□□□ -2.27
LRRC42Q9Y546 MIR517A-201ENST00000385001 87 ntBASIC0.84□□□□□ -2.27
LRRC42Q9Y546 MIR153-2-201ENST00000385225 87 ntBASIC0.84□□□□□ -2.27
LRRC42Q9Y546 MIR1185-2-201ENST00000408687 86 ntBASIC0.84□□□□□ -2.27
LRRC42Q9Y546 RNU2-16P-201ENST00000410712 136 ntBASIC0.84□□□□□ -2.27
LRRC42Q9Y546 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.84□□□□□ -2.27
LRRC42Q9Y546 AC245047.3-201ENST00000429428 127 ntBASIC0.84□□□□□ -2.27
LRRC42Q9Y546 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.84□□□□□ -2.27
LRRC42Q9Y546 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.84□□□□□ -2.27
LRRC42Q9Y546 AC098826.2-201ENST00000452011 651 ntBASIC0.84□□□□□ -2.27
LRRC42Q9Y546 AC091179.3-201ENST00000474761 144 ntBASIC0.84□□□□□ -2.27
LRRC42Q9Y546 RPL30P10-201ENST00000488148 337 ntBASIC0.84□□□□□ -2.27
LRRC42Q9Y546 TRBVA-201ENST00000498804 316 ntBASIC0.84□□□□□ -2.27
LRRC42Q9Y546 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.84□□□□□ -2.27
LRRC42Q9Y546 POLR3GP2-201ENST00000588366 668 ntBASIC0.84□□□□□ -2.27
LRRC42Q9Y546 AC022432.1-201ENST00000595739 310 ntBASIC0.84□□□□□ -2.27
LRRC42Q9Y546 AL022345.2-201ENST00000606307 135 ntBASIC0.84□□□□□ -2.27
LRRC42Q9Y546 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.84□□□□□ -2.27
LRRC42Q9Y546 AC027335.2-201ENST00000624030 375 ntBASIC0.84□□□□□ -2.27
LRRC42Q9Y546 RNU6-727P-201ENST00000363592 107 ntBASIC0.83□□□□□ -2.28
LRRC42Q9Y546 RNU1-36P-201ENST00000365130 165 ntBASIC0.83□□□□□ -2.28
LRRC42Q9Y546 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
LRRC42Q9Y546 RNU6-1186P-201ENST00000410429 97 ntBASIC0.83□□□□□ -2.28
LRRC42Q9Y546 RN7SKP200-201ENST00000410564 320 ntBASIC0.83□□□□□ -2.28
LRRC42Q9Y546 MTND1P29-201ENST00000448112 647 ntBASIC0.83□□□□□ -2.28
LRRC42Q9Y546 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.83□□□□□ -2.28
LRRC42Q9Y546 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.83□□□□□ -2.28
LRRC42Q9Y546 AC092991.1-201ENST00000477176 376 ntBASIC0.83□□□□□ -2.28
LRRC42Q9Y546 RNU6-1198P-201ENST00000516904 67 ntBASIC0.83□□□□□ -2.28
LRRC42Q9Y546 UBL5P4-201ENST00000562584 236 ntBASIC0.83□□□□□ -2.28
LRRC42Q9Y546 MIR5695-201ENST00000579717 85 ntBASIC0.83□□□□□ -2.28
LRRC42Q9Y546 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
LRRC42Q9Y546 AP000942.3-201ENST00000603702 160 ntBASIC0.83□□□□□ -2.28
LRRC42Q9Y546 U6.73-201ENST00000619194 103 ntBASIC0.83□□□□□ -2.28
LRRC42Q9Y546 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.83□□□□□ -2.28
LRRC42Q9Y546 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
LRRC42Q9Y546 RNU6-137P-201ENST00000363680 108 ntBASIC0.82□□□□□ -2.28
LRRC42Q9Y546 RNY3P3-201ENST00000363816 102 ntBASIC0.82□□□□□ -2.28
LRRC42Q9Y546 RNU6-17P-201ENST00000384245 107 ntBASIC0.82□□□□□ -2.28
LRRC42Q9Y546 SNORA25-201ENST00000384384 134 ntBASIC0.82□□□□□ -2.28
LRRC42Q9Y546 RNU6-505P-201ENST00000384427 107 ntBASIC0.82□□□□□ -2.28
LRRC42Q9Y546 RNU6-18P-201ENST00000384527 107 ntBASIC0.82□□□□□ -2.28
LRRC42Q9Y546 Y_RNA.530-201ENST00000384587 101 ntBASIC0.82□□□□□ -2.28
LRRC42Q9Y546 RNU6-440P-201ENST00000390882 105 ntBASIC0.82□□□□□ -2.28
LRRC42Q9Y546 MRPL42P3-201ENST00000401492 326 ntBASIC0.82□□□□□ -2.28
LRRC42Q9Y546 RNU2-64P-201ENST00000411315 191 ntBASIC0.82□□□□□ -2.28
LRRC42Q9Y546 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.82□□□□□ -2.28
LRRC42Q9Y546 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.82□□□□□ -2.28
LRRC42Q9Y546 AC092473.1-201ENST00000441098 221 ntBASIC0.82□□□□□ -2.28
LRRC42Q9Y546 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.82□□□□□ -2.28
LRRC42Q9Y546 RNU6-256P-201ENST00000516747 97 ntBASIC0.82□□□□□ -2.28
LRRC42Q9Y546 AL137100.2-201ENST00000555786 315 ntBASIC0.82□□□□□ -2.28
LRRC42Q9Y546 AC004584.2-201ENST00000570407 410 ntBASIC0.82□□□□□ -2.28
LRRC42Q9Y546 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.82□□□□□ -2.28
LRRC42Q9Y546 BX284668.6-201ENST00000606899 438 ntBASIC0.82□□□□□ -2.28
LRRC42Q9Y546 AC009248.2-201ENST00000619826 254 ntBASIC0.82□□□□□ -2.28
LRRC42Q9Y546 AC005858.4-201ENST00000623191 700 ntBASIC0.82□□□□□ -2.28
LRRC42Q9Y546 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.82□□□□□ -2.28
LRRC42Q9Y546 Y_RNA.38-201ENST00000362617 102 ntBASIC0.81□□□□□ -2.28
LRRC42Q9Y546 Y_RNA.212-201ENST00000364177 102 ntBASIC0.81□□□□□ -2.28
LRRC42Q9Y546 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
LRRC42Q9Y546 RNU6-159P-201ENST00000391080 106 ntBASIC0.81□□□□□ -2.28
LRRC42Q9Y546 RPL30P16-201ENST00000419341 429 ntBASIC0.81□□□□□ -2.28
LRRC42Q9Y546 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.81□□□□□ -2.28
LRRC42Q9Y546 ACA59.1-201ENST00000515966 143 ntBASIC0.81□□□□□ -2.28
LRRC42Q9Y546 RNU7-99P-201ENST00000516271 62 ntBASIC0.81□□□□□ -2.28
LRRC42Q9Y546 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.81□□□□□ -2.28
LRRC42Q9Y546 MIR4524B-201ENST00000581569 115 ntBASIC0.81□□□□□ -2.28
LRRC42Q9Y546 MIR3672-201ENST00000584290 82 ntBASIC0.81□□□□□ -2.28
LRRC42Q9Y546 PIGPP4-201ENST00000584447 307 ntBASIC0.81□□□□□ -2.28
LRRC42Q9Y546 AL513423.1-201ENST00000621695 132 ntBASIC0.81□□□□□ -2.28
LRRC42Q9Y546 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
LRRC42Q9Y546 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
LRRC42Q9Y546 RNU6-1266P-201ENST00000362794 105 ntBASIC0.8□□□□□ -2.28
LRRC42Q9Y546 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
LRRC42Q9Y546 RNU6-793P-201ENST00000384233 104 ntBASIC0.8□□□□□ -2.28
LRRC42Q9Y546 ZNF885P-201ENST00000420174 1098 ntBASIC0.8□□□□□ -2.28
LRRC42Q9Y546 AC243428.1-201ENST00000421099 264 ntBASIC0.8□□□□□ -2.28
LRRC42Q9Y546 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.8□□□□□ -2.28
LRRC42Q9Y546 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.8□□□□□ -2.28
LRRC42Q9Y546 AL163540.1-201ENST00000485382 386 ntBASIC0.8□□□□□ -2.28
LRRC42Q9Y546 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.8□□□□□ -2.28
LRRC42Q9Y546 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.8□□□□□ -2.28
LRRC42Q9Y546 MIR5696-201ENST00000578474 85 ntBASIC0.8□□□□□ -2.28
LRRC42Q9Y546 NBR2-204ENST00000587322 63 ntBASIC0.8□□□□□ -2.28
LRRC42Q9Y546 AC211469.2-201ENST00000605461 205 ntBASIC0.8□□□□□ -2.28
LRRC42Q9Y546 AC124303.1-201ENST00000605703 360 ntBASIC0.8□□□□□ -2.28
LRRC42Q9Y546 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.8□□□□□ -2.28
LRRC42Q9Y546 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.8□□□□□ -2.28
LRRC42Q9Y546 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
LRRC42Q9Y546 Y_RNA.100-201ENST00000363141 102 ntBASIC0.79□□□□□ -2.28
LRRC42Q9Y546 Y_RNA.414-201ENST00000384011 101 ntBASIC0.79□□□□□ -2.28
LRRC42Q9Y546 RNU6-541P-201ENST00000384709 110 ntBASIC0.79□□□□□ -2.28
LRRC42Q9Y546 MIR660-201ENST00000385235 97 ntBASIC0.79□□□□□ -2.28
LRRC42Q9Y546 AL034345.1-201ENST00000407768 123 ntBASIC0.79□□□□□ -2.28
LRRC42Q9Y546 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.79□□□□□ -2.28
LRRC42Q9Y546 RAB28P5-201ENST00000427490 651 ntBASIC0.79□□□□□ -2.28
LRRC42Q9Y546 MTATP6P13-201ENST00000438531 667 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms