Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
LSM4Q9Y4Z0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
LSM4Q9Y4Z0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 Y_RNA.230-201ENST00000364348 109 ntBASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 Y_RNA.439-201ENST00000384119 94 ntBASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 Y_RNA.455-201ENST00000384230 98 ntBASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 Y_RNA.462-201ENST00000384268 102 ntBASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 AL079342.1-201ENST00000401460 267 ntBASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 AC055731.1-201ENST00000474387 401 ntBASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 AC011406.1-201ENST00000512440 370 ntBASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 RNA5SP148-201ENST00000516527 94 ntBASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 RNU6-1137P-201ENST00000517073 99 ntBASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 Y_RNA.715-201ENST00000517082 110 ntBASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 RNA5SP402-201ENST00000517148 110 ntBASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 AP002001.1-203ENST00000534002 267 ntBASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 AC005786.1-201ENST00000588553 154 ntBASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 AC078899.2-201ENST00000595282 212 ntBASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 AC004467.1-201ENST00000615678 330 ntBASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 FO624990.1-201ENST00000636373 85 ntBASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LSM4Q9Y4Z0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
LSM4Q9Y4Z0 Y_RNA.527-201ENST00000384573 102 ntBASIC2.01□□□□□ -2.09
LSM4Q9Y4Z0 RNU6-985P-201ENST00000410182 104 ntBASIC2.01□□□□□ -2.09
LSM4Q9Y4Z0 AC016909.1-201ENST00000415916 166 ntBASIC2.01□□□□□ -2.09
LSM4Q9Y4Z0 MTND2P29-201ENST00000438595 412 ntBASIC2.01□□□□□ -2.09
LSM4Q9Y4Z0 AC008413.1-201ENST00000511864 177 ntBASIC2.01□□□□□ -2.09
LSM4Q9Y4Z0 RNU6-1146P-201ENST00000516282 102 ntBASIC2.01□□□□□ -2.09
LSM4Q9Y4Z0 AP005660.1-201ENST00000522972 293 ntBASIC2.01□□□□□ -2.09
LSM4Q9Y4Z0 SNORD53-201ENST00000579969 78 ntBASIC2.01□□□□□ -2.09
LSM4Q9Y4Z0 AC006504.6-201ENST00000590142 199 ntBASIC2.01□□□□□ -2.09
LSM4Q9Y4Z0 AC005176.2-201ENST00000596933 147 ntBASIC2.01□□□□□ -2.09
LSM4Q9Y4Z0 AL353149.1-201ENST00000610667 244 ntBASIC2.01□□□□□ -2.09
LSM4Q9Y4Z0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.01□□□□□ -2.09
LSM4Q9Y4Z0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.01□□□□□ -2.09
LSM4Q9Y4Z0 AC064859.1-201ENST00000624741 174 ntBASIC2.01□□□□□ -2.09
LSM4Q9Y4Z0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.01□□□□□ -2.09
LSM4Q9Y4Z0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LSM4Q9Y4Z0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2□□□□□ -2.09
LSM4Q9Y4Z0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LSM4Q9Y4Z0 RNU6-454P-201ENST00000364292 107 ntBASIC2□□□□□ -2.09
LSM4Q9Y4Z0 RNU6-450P-201ENST00000364654 107 ntBASIC2□□□□□ -2.09
LSM4Q9Y4Z0 SNORD63-201ENST00000384262 68 ntBASIC2□□□□□ -2.09
LSM4Q9Y4Z0 MIR597-201ENST00000384968 97 ntBASIC2□□□□□ -2.09
LSM4Q9Y4Z0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2□□□□□ -2.09
LSM4Q9Y4Z0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
LSM4Q9Y4Z0 RNU5A-5P-201ENST00000411054 116 ntBASIC2□□□□□ -2.09
LSM4Q9Y4Z0 RNA5SP450-201ENST00000411206 102 ntBASIC2□□□□□ -2.09
LSM4Q9Y4Z0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2□□□□□ -2.09
LSM4Q9Y4Z0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2□□□□□ -2.09
LSM4Q9Y4Z0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2□□□□□ -2.09
LSM4Q9Y4Z0 ATP5J2P3-201ENST00000451550 258 ntBASIC2□□□□□ -2.09
LSM4Q9Y4Z0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2□□□□□ -2.09
LSM4Q9Y4Z0 RNU6-1041P-201ENST00000516254 102 ntBASIC2□□□□□ -2.09
LSM4Q9Y4Z0 RNA5SP24-201ENST00000516478 95 ntBASIC2□□□□□ -2.09
LSM4Q9Y4Z0 AC055872.1-201ENST00000570978 278 ntBASIC2□□□□□ -2.09
LSM4Q9Y4Z0 AC113195.1-201ENST00000579952 141 ntBASIC2□□□□□ -2.09
LSM4Q9Y4Z0 MIR4423-201ENST00000580922 80 ntBASIC2□□□□□ -2.09
LSM4Q9Y4Z0 AC022432.1-201ENST00000595739 310 ntBASIC2□□□□□ -2.09
LSM4Q9Y4Z0 AL355297.3-201ENST00000604082 446 ntBASIC2□□□□□ -2.09
LSM4Q9Y4Z0 AL137847.3-201ENST00000611521 109 ntBASIC2□□□□□ -2.09
LSM4Q9Y4Z0 AL021879.1-201ENST00000611756 288 ntBASIC2□□□□□ -2.09
LSM4Q9Y4Z0 PART1_1.1-201ENST00000611761 217 ntBASIC2□□□□□ -2.09
LSM4Q9Y4Z0 AC006001.4-201ENST00000622243 395 ntBASIC2□□□□□ -2.09
LSM4Q9Y4Z0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2□□□□□ -2.09
LSM4Q9Y4Z0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LSM4Q9Y4Z0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 RNU6-1266P-201ENST00000362794 105 ntBASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 RNA5SP456-201ENST00000364002 114 ntBASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 RNU1-51P-201ENST00000365345 176 ntBASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 RNU1-138P-201ENST00000384093 164 ntBASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 AL117342.1-201ENST00000404861 406 ntBASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 RNU6-130P-201ENST00000411112 103 ntBASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 AC073910.1-201ENST00000445047 438 ntBASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 SNORD65B-201ENST00000459126 73 ntBASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 AC010598.1-201ENST00000510378 103 ntBASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 RNU6-764P-201ENST00000516396 105 ntBASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 SNORA31.15-201ENST00000516771 132 ntBASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 AC008749.1-201ENST00000597650 306 ntBASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 U1.36-201ENST00000620684 176 ntBASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 AC022513.1-201ENST00000624512 117 ntBASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
LSM4Q9Y4Z0 Y_RNA.183-201ENST00000363882 113 ntBASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 Y_RNA.243-201ENST00000364481 109 ntBASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 SNORA72.2-201ENST00000365028 127 ntBASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 RNU6-1160P-201ENST00000384546 104 ntBASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 MIR1253-201ENST00000408273 105 ntBASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 AL390729.2-201ENST00000416137 156 ntBASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 AC005002.2-201ENST00000438228 269 ntBASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 SUMO1P2-201ENST00000452524 304 ntBASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 UBL5P3-201ENST00000475112 231 ntBASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 AC007229.1-201ENST00000590455 412 ntBASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 AC022441.3-201ENST00000605737 136 ntBASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 AC007742.2-201ENST00000618226 398 ntBASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 AC091932.3-201ENST00000624223 323 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms