Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 RNU6-1305P-201ENST00000364353 104 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 RNU6-1329P-201ENST00000365664 107 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 RNU6-1215P-201ENST00000384441 102 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 AC245047.3-201ENST00000429428 127 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 AL359672.1-201ENST00000442302 409 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 AC092436.3-201ENST00000511788 257 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 Y_RNA.665-201ENST00000516177 98 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 RNU6-947P-201ENST00000516264 106 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 MTND1P5-201ENST00000517906 940 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 MTND1P35-201ENST00000526739 508 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 MIR4421-201ENST00000578133 69 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 AC100830.2-201ENST00000581636 240 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 AP000907.4-201ENST00000604143 237 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 SNORD114-21-201ENST00000606412 72 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 AL357078.3-201ENST00000607528 618 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 RMST_3.1-201ENST00000611651 109 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 AC090517.2-201ENST00000614966 680 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 FAM157A-202ENST00000615155 405 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 AC024614.3-201ENST00000637860 256 ntBASIC0.71□□□□□ -2.3
CHTOPQ9Y3Y2 MTND4P5-201ENST00000435821 1374 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 MIR378A-201ENST00000362177 66 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 Y_RNA.6-201ENST00000362350 114 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 Y_RNA.89-201ENST00000363031 102 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 SNORA7.1-201ENST00000363750 139 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 Y_RNA.373-201ENST00000365600 103 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 RNU6-214P-201ENST00000384130 107 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 Y_RNA.530-201ENST00000384587 101 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 MIR586-201ENST00000385035 97 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 RNU6-332P-201ENST00000391193 108 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 MIR450B-201ENST00000401182 78 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 Y_RNA.615-201ENST00000410769 117 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 RNU6-373P-201ENST00000411247 98 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 AP1B1P2-201ENST00000416196 106 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 MRPS10P2-201ENST00000431226 381 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 NDUFA5P4-201ENST00000436704 385 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 RNU7-57P-201ENST00000459540 60 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 RPS29P27-201ENST00000463711 170 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 RPS29P25-201ENST00000481709 171 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 AC083904.1-201ENST00000487828 231 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 AC093852.1-201ENST00000503587 266 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 AC025465.4-201ENST00000513422 638 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 RNU6-322P-201ENST00000516010 103 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 RNU6-612P-201ENST00000516909 102 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 SCOCP1-201ENST00000554676 349 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 CPDP1-201ENST00000579660 283 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 MIR5695-201ENST00000579717 85 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 AP000942.3-201ENST00000603702 160 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 AL357312.1-201ENST00000603879 298 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 SNRPGP20-201ENST00000604477 205 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 AL512598.1-201ENST00000610158 273 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 MIR3688-2-201ENST00000636963 87 ntBASIC0.7□□□□□ -2.3
CHTOPQ9Y3Y2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 RNU6-227P-201ENST00000362865 103 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 Y_RNA.100-201ENST00000363141 102 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 SNORD113-7-201ENST00000363762 77 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 RNU4-12P-201ENST00000365233 139 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 RNU6-128P-201ENST00000383976 107 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 Y_RNA.573-201ENST00000384763 105 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 RNU6-482P-201ENST00000391068 107 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 MIR548F1-201ENST00000408667 84 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 RNA5SP118-201ENST00000410385 109 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 RNA5SP494-201ENST00000410653 129 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 RNU6-733P-201ENST00000410759 104 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 ZNF885P-201ENST00000420174 1098 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 RPS27P1-201ENST00000450552 247 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 AC009474.2-201ENST00000451383 136 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 RNU7-66P-201ENST00000459469 62 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 AC011352.1-201ENST00000512300 793 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 RPL39P5-202ENST00000512505 151 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 RNU6-1332P-201ENST00000516666 104 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 AC104576.1-201ENST00000524225 88 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 AC026371.1-201ENST00000551867 419 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 AL162424.1-201ENST00000602325 221 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 AC104465.1-201ENST00000611365 139 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 AL138726.1-201ENST00000614873 333 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 AL157834.3-201ENST00000615543 103 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 AC073349.3-201ENST00000617616 186 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 MIR8054-201ENST00000620877 86 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 AL078596.1-201ENST00000624856 447 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 AC073869.6-201ENST00000640656 341 ntBASIC0.69□□□□□ -2.3
CHTOPQ9Y3Y2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
CHTOPQ9Y3Y2 Y_RNA.212-201ENST00000364177 102 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 312.3 ms