Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.18□□□□□ -1.9
R3HCC1Q9Y3T6 AL137159.1-201ENST00000452808 512 ntBASIC3.18□□□□□ -1.9
R3HCC1Q9Y3T6 AL139109.1-201ENST00000455491 297 ntBASIC3.18□□□□□ -1.9
R3HCC1Q9Y3T6 RNU6-221P-201ENST00000459541 99 ntBASIC3.18□□□□□ -1.9
R3HCC1Q9Y3T6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.18□□□□□ -1.9
R3HCC1Q9Y3T6 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.18□□□□□ -1.9
R3HCC1Q9Y3T6 AC013412.1-201ENST00000610687 192 ntBASIC3.18□□□□□ -1.9
R3HCC1Q9Y3T6 AC010297.1-201ENST00000623948 149 ntBASIC3.18□□□□□ -1.9
R3HCC1Q9Y3T6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
R3HCC1Q9Y3T6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
R3HCC1Q9Y3T6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
R3HCC1Q9Y3T6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
R3HCC1Q9Y3T6 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.17□□□□□ -1.9
R3HCC1Q9Y3T6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
R3HCC1Q9Y3T6 AC073325.2-201ENST00000339545 159 ntBASIC3.17□□□□□ -1.9
R3HCC1Q9Y3T6 Y_RNA.257-201ENST00000364596 102 ntBASIC3.17□□□□□ -1.9
R3HCC1Q9Y3T6 DEFA7P-201ENST00000382676 285 ntBASIC3.17□□□□□ -1.9
R3HCC1Q9Y3T6 SNORA54-201ENST00000384281 123 ntBASIC3.17□□□□□ -1.9
R3HCC1Q9Y3T6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
R3HCC1Q9Y3T6 RNU6-907P-201ENST00000390924 102 ntBASIC3.17□□□□□ -1.9
R3HCC1Q9Y3T6 RNU6-651P-201ENST00000411040 105 ntBASIC3.17□□□□□ -1.9
R3HCC1Q9Y3T6 MTCO1P44-201ENST00000441935 243 ntBASIC3.17□□□□□ -1.9
R3HCC1Q9Y3T6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.17□□□□□ -1.9
R3HCC1Q9Y3T6 RNU6-191P-201ENST00000516295 94 ntBASIC3.17□□□□□ -1.9
R3HCC1Q9Y3T6 RNU6-948P-201ENST00000516374 107 ntBASIC3.17□□□□□ -1.9
R3HCC1Q9Y3T6 SNORA31.15-201ENST00000516771 132 ntBASIC3.17□□□□□ -1.9
R3HCC1Q9Y3T6 AC005828.6-201ENST00000606610 232 ntBASIC3.17□□□□□ -1.9
R3HCC1Q9Y3T6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.17□□□□□ -1.9
R3HCC1Q9Y3T6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
R3HCC1Q9Y3T6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.17□□□□□ -1.9
R3HCC1Q9Y3T6 Y_RNA.65-201ENST00000362846 100 ntBASIC3.16□□□□□ -1.9
R3HCC1Q9Y3T6 VTRNA1-1-201ENST00000363120 99 ntBASIC3.16□□□□□ -1.9
R3HCC1Q9Y3T6 SNORD56.5-201ENST00000364281 72 ntBASIC3.16□□□□□ -1.9
R3HCC1Q9Y3T6 RNU6-740P-201ENST00000364734 105 ntBASIC3.16□□□□□ -1.9
R3HCC1Q9Y3T6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
R3HCC1Q9Y3T6 SNORD58.1-201ENST00000391313 66 ntBASIC3.16□□□□□ -1.9
R3HCC1Q9Y3T6 RNU2-14P-201ENST00000411053 191 ntBASIC3.16□□□□□ -1.9
R3HCC1Q9Y3T6 RNU6-847P-201ENST00000411115 108 ntBASIC3.16□□□□□ -1.9
R3HCC1Q9Y3T6 AC123900.1-201ENST00000420390 96 ntBASIC3.16□□□□□ -1.9
R3HCC1Q9Y3T6 AC074290.1-201ENST00000448883 135 ntBASIC3.16□□□□□ -1.9
R3HCC1Q9Y3T6 PRELID3BP1-201ENST00000457142 540 ntBASIC3.16□□□□□ -1.9
R3HCC1Q9Y3T6 SNORA27.4-201ENST00000516650 95 ntBASIC3.16□□□□□ -1.9
R3HCC1Q9Y3T6 AC141273.2-201ENST00000618989 130 ntBASIC3.16□□□□□ -1.9
R3HCC1Q9Y3T6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.16□□□□□ -1.9
R3HCC1Q9Y3T6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.15□□□□□ -1.9
R3HCC1Q9Y3T6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
R3HCC1Q9Y3T6 Y_RNA.117-201ENST00000363294 101 ntBASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 Y_RNA.269-201ENST00000364685 89 ntBASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 Y_RNA.361-201ENST00000365515 120 ntBASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 RNU6-514P-201ENST00000384208 107 ntBASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 RNU6-1235P-201ENST00000384559 107 ntBASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 Y_RNA.552-201ENST00000384665 112 ntBASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 RNU6-1072P-201ENST00000384703 107 ntBASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 RNU6-443P-201ENST00000384780 107 ntBASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 AL355796.1-201ENST00000406706 323 ntBASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 RNA5SP492-201ENST00000411330 114 ntBASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 AC016909.1-201ENST00000415916 166 ntBASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 AC009238.1-201ENST00000442165 424 ntBASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 AC009237.6-201ENST00000446969 424 ntBASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 RNU7-26P-201ENST00000458980 63 ntBASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 RNU6-498P-201ENST00000459468 107 ntBASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 BX284668.6-201ENST00000606899 438 ntBASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 U4atac.1-201ENST00000618345 95 ntBASIC3.15□□□□□ -1.91
R3HCC1Q9Y3T6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
R3HCC1Q9Y3T6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.14□□□□□ -1.91
R3HCC1Q9Y3T6 Y_RNA.76-201ENST00000362931 109 ntBASIC3.14□□□□□ -1.91
R3HCC1Q9Y3T6 Y_RNA.275-201ENST00000364726 110 ntBASIC3.14□□□□□ -1.91
R3HCC1Q9Y3T6 RNU6-662P-201ENST00000384253 104 ntBASIC3.14□□□□□ -1.91
R3HCC1Q9Y3T6 RNA5SP181-201ENST00000410246 98 ntBASIC3.14□□□□□ -1.91
R3HCC1Q9Y3T6 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.14□□□□□ -1.91
R3HCC1Q9Y3T6 COTL1P1-201ENST00000422309 375 ntBASIC3.14□□□□□ -1.91
R3HCC1Q9Y3T6 SNORD65B-201ENST00000459126 73 ntBASIC3.14□□□□□ -1.91
R3HCC1Q9Y3T6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.14□□□□□ -1.91
R3HCC1Q9Y3T6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.14□□□□□ -1.91
R3HCC1Q9Y3T6 SNORA4.4-201ENST00000515921 135 ntBASIC3.14□□□□□ -1.91
R3HCC1Q9Y3T6 AC025647.1-201ENST00000517879 253 ntBASIC3.14□□□□□ -1.91
R3HCC1Q9Y3T6 NDUFA5P6-201ENST00000542110 379 ntBASIC3.14□□□□□ -1.91
R3HCC1Q9Y3T6 AL137790.1-201ENST00000634283 177 ntBASIC3.14□□□□□ -1.91
R3HCC1Q9Y3T6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
R3HCC1Q9Y3T6 UBE2WP1-201ENST00000362030 340 ntBASIC3.13□□□□□ -1.91
R3HCC1Q9Y3T6 MIR512-1-201ENST00000384913 84 ntBASIC3.13□□□□□ -1.91
R3HCC1Q9Y3T6 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.13□□□□□ -1.91
R3HCC1Q9Y3T6 MIR3668-201ENST00000582138 75 ntBASIC3.13□□□□□ -1.91
R3HCC1Q9Y3T6 AL449363.1-201ENST00000617815 186 ntBASIC3.13□□□□□ -1.91
R3HCC1Q9Y3T6 Y_RNA.124-201ENST00000363339 93 ntBASIC3.12□□□□□ -1.91
R3HCC1Q9Y3T6 SNORA20B-201ENST00000384220 132 ntBASIC3.12□□□□□ -1.91
R3HCC1Q9Y3T6 SNORA44-201ENST00000384584 132 ntBASIC3.12□□□□□ -1.91
R3HCC1Q9Y3T6 MIR1262-201ENST00000408276 93 ntBASIC3.12□□□□□ -1.91
R3HCC1Q9Y3T6 RNU2-61P-201ENST00000411069 191 ntBASIC3.12□□□□□ -1.91
R3HCC1Q9Y3T6 AL135790.2-201ENST00000437701 267 ntBASIC3.12□□□□□ -1.91
R3HCC1Q9Y3T6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.12□□□□□ -1.91
R3HCC1Q9Y3T6 SNORA9.3-201ENST00000516383 129 ntBASIC3.12□□□□□ -1.91
R3HCC1Q9Y3T6 AL512605.2-201ENST00000592972 256 ntBASIC3.12□□□□□ -1.91
R3HCC1Q9Y3T6 ZNF271P-202ENST00000465539 1970 ntBASIC3.11□□□□□ -1.91
R3HCC1Q9Y3T6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.11□□□□□ -1.91
R3HCC1Q9Y3T6 AL121890.1-201ENST00000435457 205 ntBASIC3.11□□□□□ -1.91
R3HCC1Q9Y3T6 AC025750.2-201ENST00000442609 450 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms