Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 TMSB4XP3-201ENST00000445144 114 ntBASIC3.18□□□□□ -1.9
PTPN22Q9Y2R2 RPL23AP3-201ENST00000453844 468 ntBASIC3.18□□□□□ -1.9
PTPN22Q9Y2R2 AC091179.3-201ENST00000474761 144 ntBASIC3.18□□□□□ -1.9
PTPN22Q9Y2R2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPN22Q9Y2R2 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.18□□□□□ -1.9
PTPN22Q9Y2R2 AC096725.1-201ENST00000514266 313 ntBASIC3.18□□□□□ -1.9
PTPN22Q9Y2R2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN22Q9Y2R2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN22Q9Y2R2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN22Q9Y2R2 MIR5692C2-201ENST00000577959 77 ntBASIC3.18□□□□□ -1.9
PTPN22Q9Y2R2 AC069294.1-201ENST00000608397 350 ntBASIC3.18□□□□□ -1.9
PTPN22Q9Y2R2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPN22Q9Y2R2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPN22Q9Y2R2 AC135776.4-201ENST00000624300 1904 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 RNU6-655P-201ENST00000362858 107 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 SNORA72.2-201ENST00000365028 127 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 Y_RNA.498-201ENST00000384460 102 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 MIR218-1-201ENST00000384999 110 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 Y_RNA.597-201ENST00000410463 100 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 RNU6-1199P-201ENST00000411249 104 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 MICF-203ENST00000432679 129 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 Z96811.1-201ENST00000445880 108 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 AL121594.1-201ENST00000475906 575 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 RN7SL633P-201ENST00000488974 297 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 RNU5F-2P-201ENST00000516066 82 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 RNU6-1278P-201ENST00000516130 107 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 RNU6-191P-201ENST00000516295 94 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 AC109329.2-201ENST00000519658 482 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 AC022559.1-201ENST00000520905 205 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 MIR3923-201ENST00000579521 83 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 SNRPGP20-201ENST00000604477 205 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 CTSLP2-204ENST00000629029 392 ntBASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPN22Q9Y2R2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 Y_RNA.101-201ENST00000363154 102 ntBASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 Y_RNA.170-201ENST00000363746 110 ntBASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 Y_RNA.262-201ENST00000364641 102 ntBASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 MIR186-201ENST00000384988 86 ntBASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 RNU6-1248P-201ENST00000391096 64 ntBASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 MIR1289-2-201ENST00000408360 111 ntBASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 RNU2-54P-201ENST00000410299 190 ntBASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 AP004217.1-201ENST00000480579 346 ntBASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 CKS1BP2-201ENST00000497342 240 ntBASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 AC023141.11-201ENST00000508864 202 ntBASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 RN7SKP282-201ENST00000516824 299 ntBASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 RNU6-548P-201ENST00000517083 115 ntBASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 MRPS18CP4-201ENST00000535821 231 ntBASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 MIR4648-201ENST00000580107 72 ntBASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 AL449363.1-201ENST00000617815 186 ntBASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 FAM35CP-201ENST00000554755 2470 ntBASIC3.16□□□□□ -1.9
PTPN22Q9Y2R2 AC108206.1-201ENST00000570186 4159 ntBASIC3.15□□□□□ -1.9
PTPN22Q9Y2R2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PTPN22Q9Y2R2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PTPN22Q9Y2R2 RNU6-529P-201ENST00000363383 104 ntBASIC3.15□□□□□ -1.91
PTPN22Q9Y2R2 RNU6-1210P-201ENST00000363775 107 ntBASIC3.15□□□□□ -1.91
PTPN22Q9Y2R2 RNA5SP201-201ENST00000410316 124 ntBASIC3.15□□□□□ -1.91
PTPN22Q9Y2R2 RNU6-394P-201ENST00000410735 107 ntBASIC3.15□□□□□ -1.91
PTPN22Q9Y2R2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPN22Q9Y2R2 RNU7-200P-201ENST00000516105 62 ntBASIC3.15□□□□□ -1.91
PTPN22Q9Y2R2 RNU6-966P-201ENST00000516479 104 ntBASIC3.15□□□□□ -1.91
PTPN22Q9Y2R2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN22Q9Y2R2 AL034555.1-201ENST00000604816 211 ntBASIC3.15□□□□□ -1.91
PTPN22Q9Y2R2 AC108706.1-201ENST00000611053 297 ntBASIC3.15□□□□□ -1.91
PTPN22Q9Y2R2 AC004467.1-201ENST00000615678 330 ntBASIC3.15□□□□□ -1.91
PTPN22Q9Y2R2 AC021753.1-201ENST00000635724 168 ntBASIC3.15□□□□□ -1.91
PTPN22Q9Y2R2 AL355596.1-201ENST00000565399 3996 ntBASIC3.15□□□□□ -1.91
PTPN22Q9Y2R2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PTPN22Q9Y2R2 AC092593.1-201ENST00000515413 1815 ntBASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 Y_RNA.441-201ENST00000384123 112 ntBASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 MIR627-201ENST00000384979 97 ntBASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 MIR613-201ENST00000385248 95 ntBASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 MIR208B-201ENST00000401172 77 ntBASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 MTCO2P33-201ENST00000402100 465 ntBASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 CBX3P9-201ENST00000402326 552 ntBASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 U6atac.2-201ENST00000408644 118 ntBASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 AC091021.1-201ENST00000468051 388 ntBASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 RPL23AP70-201ENST00000483361 460 ntBASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 MIR4308-201ENST00000580634 81 ntBASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 AC105245.1-201ENST00000581934 244 ntBASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 AC091932.3-201ENST00000624223 323 ntBASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 MIR3674-201ENST00000636576 68 ntBASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 AC080128.1-201ENST00000474389 1917 ntBASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms