Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SNORD32A-201ENST00000364805 84 ntBASIC-0.58□□□□□ -2.5
SHANK2Q9UPX8 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.58□□□□□ -2.5
SHANK2Q9UPX8 RNY3P13-201ENST00000365542 102 ntBASIC-0.58□□□□□ -2.5
SHANK2Q9UPX8 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.58□□□□□ -2.5
SHANK2Q9UPX8 MIR587-201ENST00000384845 96 ntBASIC-0.58□□□□□ -2.5
SHANK2Q9UPX8 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.58□□□□□ -2.5
SHANK2Q9UPX8 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.58□□□□□ -2.5
SHANK2Q9UPX8 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.58□□□□□ -2.5
SHANK2Q9UPX8 RNU4-49P-201ENST00000516080 140 ntBASIC-0.58□□□□□ -2.5
SHANK2Q9UPX8 RNU2-46P-201ENST00000517038 113 ntBASIC-0.58□□□□□ -2.5
SHANK2Q9UPX8 AL359547.2-201ENST00000615810 418 ntBASIC-0.58□□□□□ -2.5
SHANK2Q9UPX8 FTX_2.1-201ENST00000618816 94 ntBASIC-0.58□□□□□ -2.5
SHANK2Q9UPX8 MIR320C1-201ENST00000408566 88 ntBASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 RNU2-3P-201ENST00000410144 191 ntBASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 MTCO1P27-201ENST00000448269 226 ntBASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 AC016632.1-201ENST00000503994 196 ntBASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 RNU6-782P-201ENST00000516852 104 ntBASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 AC069545.1-201ENST00000605671 358 ntBASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 AC005520.5-201ENST00000613926 164 ntBASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 AC023158.2-201ENST00000614876 543 ntBASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 FRG1KP-201ENST00000623592 341 ntBASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 AC005592.1-201ENST00000566527 1640 ntBASIC-0.59□□□□□ -2.5
SHANK2Q9UPX8 RNU6-511P-201ENST00000363496 107 ntBASIC-0.6□□□□□ -2.5
SHANK2Q9UPX8 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.6□□□□□ -2.5
SHANK2Q9UPX8 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.6□□□□□ -2.5
SHANK2Q9UPX8 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.6□□□□□ -2.5
SHANK2Q9UPX8 AC013470.1-201ENST00000453438 462 ntBASIC-0.6□□□□□ -2.5
SHANK2Q9UPX8 AC010486.2-201ENST00000505572 483 ntBASIC-0.6□□□□□ -2.5
SHANK2Q9UPX8 AC013828.2-201ENST00000532487 235 ntBASIC-0.6□□□□□ -2.5
SHANK2Q9UPX8 AC012433.1-201ENST00000588916 398 ntBASIC-0.6□□□□□ -2.5
SHANK2Q9UPX8 AL121992.2-201ENST00000606262 256 ntBASIC-0.6□□□□□ -2.5
SHANK2Q9UPX8 AL008636.1-201ENST00000625038 1018 ntBASIC-0.6□□□□□ -2.5
SHANK2Q9UPX8 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.6□□□□□ -2.5
SHANK2Q9UPX8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.6□□□□□ -2.51
SHANK2Q9UPX8 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 U3.4-201ENST00000363352 213 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 SNORA36.1-201ENST00000363424 132 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 SNORD14C-201ENST00000365382 88 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 MIR520C-201ENST00000385005 87 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 MIR1302-7-201ENST00000408841 72 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 CALM2P2-201ENST00000428512 440 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 AL392103.1-201ENST00000447000 198 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 RNU7-57P-201ENST00000459540 60 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 AC025647.1-201ENST00000517879 253 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 MIR499B-201ENST00000636498 73 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 RNU6-428P-201ENST00000362942 107 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 RNU6-960P-201ENST00000364056 120 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 MIR760-201ENST00000390220 80 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 AL133396.1-201ENST00000432048 687 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 RNU7-165P-201ENST00000458864 60 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 RNU6-377P-201ENST00000515965 102 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 MIR3912-201ENST00000577566 105 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 MIR4804-201ENST00000581683 73 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 MIR5006-201ENST00000583027 110 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 AC006157.1-201ENST00000611750 366 ntBASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.61□□□□□ -2.51
SHANK2Q9UPX8 MIRLET7C-201ENST00000362160 84 ntBASIC-0.62□□□□□ -2.51
SHANK2Q9UPX8 RNU6-371P-201ENST00000364283 108 ntBASIC-0.62□□□□□ -2.51
SHANK2Q9UPX8 RNU6-336P-201ENST00000364891 107 ntBASIC-0.62□□□□□ -2.51
SHANK2Q9UPX8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.62□□□□□ -2.51
SHANK2Q9UPX8 SNORD126-201ENST00000459475 77 ntBASIC-0.62□□□□□ -2.51
SHANK2Q9UPX8 RNU7-94P-201ENST00000459576 63 ntBASIC-0.62□□□□□ -2.51
SHANK2Q9UPX8 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.62□□□□□ -2.51
SHANK2Q9UPX8 MTND3P25-201ENST00000509243 135 ntBASIC-0.62□□□□□ -2.51
SHANK2Q9UPX8 RNU7-99P-201ENST00000516271 62 ntBASIC-0.62□□□□□ -2.51
SHANK2Q9UPX8 AC027288.2-201ENST00000553028 243 ntBASIC-0.62□□□□□ -2.51
SHANK2Q9UPX8 AC026741.1-201ENST00000605892 482 ntBASIC-0.62□□□□□ -2.51
SHANK2Q9UPX8 AC104260.1-201ENST00000616660 539 ntBASIC-0.62□□□□□ -2.51
SHANK2Q9UPX8 RNU6-187P-201ENST00000384139 106 ntBASIC-0.63□□□□□ -2.51
SHANK2Q9UPX8 ZNF885P-201ENST00000420174 1098 ntBASIC-0.63□□□□□ -2.51
SHANK2Q9UPX8 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.63□□□□□ -2.51
SHANK2Q9UPX8 AC004386.2-201ENST00000441858 148 ntBASIC-0.63□□□□□ -2.51
SHANK2Q9UPX8 RNU6-848P-201ENST00000515948 107 ntBASIC-0.63□□□□□ -2.51
SHANK2Q9UPX8 RNU6-617P-201ENST00000516147 107 ntBASIC-0.63□□□□□ -2.51
SHANK2Q9UPX8 RNU6-473P-201ENST00000516164 107 ntBASIC-0.63□□□□□ -2.51
SHANK2Q9UPX8 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.63□□□□□ -2.51
SHANK2Q9UPX8 AC011921.3-201ENST00000605540 361 ntBASIC-0.63□□□□□ -2.51
SHANK2Q9UPX8 AL355073.2-201ENST00000612106 557 ntBASIC-0.63□□□□□ -2.51
SHANK2Q9UPX8 U6.73-201ENST00000619194 103 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms