Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZC3H4Q9UPT8 SNORA5B-201ENST00000363786 132 ntBASIC4.26□□□□□ -1.73
ZC3H4Q9UPT8 RNU6-597P-201ENST00000365620 102 ntBASIC4.26□□□□□ -1.73
ZC3H4Q9UPT8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ZC3H4Q9UPT8 AL353705.1-201ENST00000433468 480 ntBASIC4.26□□□□□ -1.73
ZC3H4Q9UPT8 SNRPGP8-201ENST00000454064 226 ntBASIC4.26□□□□□ -1.73
ZC3H4Q9UPT8 RNU7-14P-201ENST00000459331 62 ntBASIC4.26□□□□□ -1.73
ZC3H4Q9UPT8 RPS26P55-201ENST00000471178 356 ntBASIC4.26□□□□□ -1.73
ZC3H4Q9UPT8 AC006445.1-201ENST00000491925 405 ntBASIC4.26□□□□□ -1.73
ZC3H4Q9UPT8 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.26□□□□□ -1.73
ZC3H4Q9UPT8 IGKV2-26-201ENST00000518305 343 ntBASIC4.26□□□□□ -1.73
ZC3H4Q9UPT8 AC079598.5-201ENST00000547460 117 ntBASIC4.26□□□□□ -1.73
ZC3H4Q9UPT8 AC005972.2-201ENST00000604690 348 ntBASIC4.26□□□□□ -1.73
ZC3H4Q9UPT8 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.26□□□□□ -1.73
ZC3H4Q9UPT8 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ZC3H4Q9UPT8 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ZC3H4Q9UPT8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 MIR422A-201ENST00000362286 90 ntBASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 SNORA27.1-201ENST00000362604 124 ntBASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 SNORA44-201ENST00000384584 132 ntBASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 MIR1283-1-201ENST00000408494 87 ntBASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 RNU6-57P-201ENST00000411348 103 ntBASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 AL135786.1-201ENST00000415892 214 ntBASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 RNU6-1061P-201ENST00000516530 99 ntBASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 RNU6-63P-201ENST00000516690 95 ntBASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 RNU7-116P-201ENST00000516940 62 ntBASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 AC008011.1-201ENST00000545989 227 ntBASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 AC133485.4-201ENST00000561835 220 ntBASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 AC138907.4-201ENST00000570107 226 ntBASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 RPL30P11-203ENST00000598995 310 ntBASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 AL049861.1-201ENST00000603130 150 ntBASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 AC244205.2-202ENST00000635781 342 ntBASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ZC3H4Q9UPT8 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 SNORD114-7-201ENST00000362520 77 ntBASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 U8.1-201ENST00000362843 134 ntBASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 RNU4-13P-201ENST00000364019 141 ntBASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 RNU6-1323P-201ENST00000384025 107 ntBASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 Y_RNA.432-201ENST00000384087 111 ntBASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 MIR181A2-201ENST00000384863 110 ntBASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 Y_RNA.692-201ENST00000516627 105 ntBASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 RNU6-579P-201ENST00000516879 102 ntBASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 CYCSP26-201ENST00000534107 320 ntBASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 MIR3162-201ENST00000581818 82 ntBASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 uc_338.14-201ENST00000613162 166 ntBASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 snoZ196.1-201ENST00000625269 89 ntBASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 AC091564.4-201ENST00000533934 2194 ntBASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 MTND5P32-201ENST00000560711 1802 ntBASIC4.24□□□□□ -1.73
ZC3H4Q9UPT8 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZC3H4Q9UPT8 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZC3H4Q9UPT8 RNU6-1298P-201ENST00000362456 101 ntBASIC4.23□□□□□ -1.73
ZC3H4Q9UPT8 SNORD32B-201ENST00000364460 84 ntBASIC4.23□□□□□ -1.73
ZC3H4Q9UPT8 AC025750.2-201ENST00000442609 450 ntBASIC4.23□□□□□ -1.73
ZC3H4Q9UPT8 AC090515.1-201ENST00000465295 476 ntBASIC4.23□□□□□ -1.73
ZC3H4Q9UPT8 RNU6-197P-201ENST00000516680 100 ntBASIC4.23□□□□□ -1.73
ZC3H4Q9UPT8 RNA5SP170-201ENST00000517150 101 ntBASIC4.23□□□□□ -1.73
ZC3H4Q9UPT8 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.23□□□□□ -1.73
ZC3H4Q9UPT8 MAPK10-362ENST00000641864 4484 ntBASIC4.23□□□□□ -1.73
ZC3H4Q9UPT8 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ZC3H4Q9UPT8 Z82209.1-201ENST00000422141 2135 ntBASIC4.23□□□□□ -1.73
ZC3H4Q9UPT8 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZC3H4Q9UPT8 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
ZC3H4Q9UPT8 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ZC3H4Q9UPT8 IPO8P1-201ENST00000455509 3109 ntBASIC4.22□□□□□ -1.73
ZC3H4Q9UPT8 Y_RNA.43-201ENST00000362670 111 ntBASIC4.22□□□□□ -1.73
ZC3H4Q9UPT8 MIR29B2-201ENST00000385055 81 ntBASIC4.22□□□□□ -1.73
ZC3H4Q9UPT8 RNA5SP496-201ENST00000391240 109 ntBASIC4.22□□□□□ -1.73
ZC3H4Q9UPT8 MIR300-201ENST00000401138 83 ntBASIC4.22□□□□□ -1.73
ZC3H4Q9UPT8 AC097463.2-201ENST00000421074 142 ntBASIC4.22□□□□□ -1.73
ZC3H4Q9UPT8 RPS29P12-201ENST00000460178 152 ntBASIC4.22□□□□□ -1.73
ZC3H4Q9UPT8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.22□□□□□ -1.73
ZC3H4Q9UPT8 AC108081.1-201ENST00000604358 221 ntBASIC4.22□□□□□ -1.73
ZC3H4Q9UPT8 U7.8-201ENST00000619968 63 ntBASIC4.22□□□□□ -1.73
ZC3H4Q9UPT8 U4.6-201ENST00000621618 127 ntBASIC4.22□□□□□ -1.73
ZC3H4Q9UPT8 SNORA50A-202ENST00000629536 136 ntBASIC4.22□□□□□ -1.73
ZC3H4Q9UPT8 MIR3914-2-201ENST00000637339 95 ntBASIC4.22□□□□□ -1.73
ZC3H4Q9UPT8 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ZC3H4Q9UPT8 AP003122.5-201ENST00000527668 3766 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms