Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RNU6-487P-201ENST00000365430 104 ntBASIC4.57□□□□□ -1.68
PDZRN3Q9UPQ7 U3.26-201ENST00000391236 204 ntBASIC4.57□□□□□ -1.68
PDZRN3Q9UPQ7 Z98941.1-201ENST00000407764 100 ntBASIC4.57□□□□□ -1.68
PDZRN3Q9UPQ7 RHEBP3-201ENST00000411920 351 ntBASIC4.57□□□□□ -1.68
PDZRN3Q9UPQ7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.57□□□□□ -1.68
PDZRN3Q9UPQ7 EIF4EP4-201ENST00000424916 578 ntBASIC4.57□□□□□ -1.68
PDZRN3Q9UPQ7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.57□□□□□ -1.68
PDZRN3Q9UPQ7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.57□□□□□ -1.68
PDZRN3Q9UPQ7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
PDZRN3Q9UPQ7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.57□□□□□ -1.68
PDZRN3Q9UPQ7 SNRPGP15-201ENST00000600149 222 ntBASIC4.57□□□□□ -1.68
PDZRN3Q9UPQ7 AC093732.2-201ENST00000607950 274 ntBASIC4.57□□□□□ -1.68
PDZRN3Q9UPQ7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.57□□□□□ -1.68
PDZRN3Q9UPQ7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDZRN3Q9UPQ7 AL356274.2-201ENST00000624379 3752 ntBASIC4.56□□□□□ -1.68
PDZRN3Q9UPQ7 AC007256.1-201ENST00000392253 2765 ntBASIC4.56□□□□□ -1.68
PDZRN3Q9UPQ7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDZRN3Q9UPQ7 ADAM3A-203ENST00000461344 2157 ntBASIC4.56□□□□□ -1.68
PDZRN3Q9UPQ7 RNU4-36P-201ENST00000364294 144 ntBASIC4.56□□□□□ -1.68
PDZRN3Q9UPQ7 RNU6-335P-201ENST00000364563 113 ntBASIC4.56□□□□□ -1.68
PDZRN3Q9UPQ7 RNU6-219P-201ENST00000364728 107 ntBASIC4.56□□□□□ -1.68
PDZRN3Q9UPQ7 RNU6-644P-201ENST00000391155 98 ntBASIC4.56□□□□□ -1.68
PDZRN3Q9UPQ7 MIR208B-201ENST00000401172 77 ntBASIC4.56□□□□□ -1.68
PDZRN3Q9UPQ7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.56□□□□□ -1.68
PDZRN3Q9UPQ7 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.56□□□□□ -1.68
PDZRN3Q9UPQ7 SNRPGP3-201ENST00000469405 227 ntBASIC4.56□□□□□ -1.68
PDZRN3Q9UPQ7 AC084357.1-201ENST00000473404 255 ntBASIC4.56□□□□□ -1.68
PDZRN3Q9UPQ7 AC090525.1-201ENST00000479116 478 ntBASIC4.56□□□□□ -1.68
PDZRN3Q9UPQ7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.56□□□□□ -1.68
PDZRN3Q9UPQ7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.56□□□□□ -1.68
PDZRN3Q9UPQ7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDZRN3Q9UPQ7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
PDZRN3Q9UPQ7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.55□□□□□ -1.68
PDZRN3Q9UPQ7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PDZRN3Q9UPQ7 RNU1-72P-201ENST00000362976 153 ntBASIC4.55□□□□□ -1.68
PDZRN3Q9UPQ7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.55□□□□□ -1.68
PDZRN3Q9UPQ7 SNRPEP9-201ENST00000436794 238 ntBASIC4.55□□□□□ -1.68
PDZRN3Q9UPQ7 AC097462.1-201ENST00000514125 324 ntBASIC4.55□□□□□ -1.68
PDZRN3Q9UPQ7 RNU1-103P-201ENST00000516502 125 ntBASIC4.55□□□□□ -1.68
PDZRN3Q9UPQ7 RNU6-1337P-201ENST00000516525 95 ntBASIC4.55□□□□□ -1.68
PDZRN3Q9UPQ7 AC025281.1-201ENST00000567026 265 ntBASIC4.55□□□□□ -1.68
PDZRN3Q9UPQ7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.55□□□□□ -1.68
PDZRN3Q9UPQ7 AC103988.1-201ENST00000566382 2177 ntBASIC4.55□□□□□ -1.68
PDZRN3Q9UPQ7 CEP170P1-201ENST00000502249 4587 ntBASIC4.55□□□□□ -1.68
PDZRN3Q9UPQ7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
PDZRN3Q9UPQ7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.55□□□□□ -1.68
PDZRN3Q9UPQ7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
PDZRN3Q9UPQ7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 OTUD4P1-201ENST00000237841 3067 ntBASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 DEFB108F-201ENST00000344638 222 ntBASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 Y_RNA.213-201ENST00000364178 111 ntBASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 RNU1-100P-201ENST00000365255 165 ntBASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 RNU6-418P-201ENST00000384035 107 ntBASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 Y_RNA.565-201ENST00000384719 101 ntBASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 RNU7-116P-201ENST00000516940 62 ntBASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 RNU1-117P-201ENST00000517041 158 ntBASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 CKS1BP7-201ENST00000522230 235 ntBASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 uc_338.4-201ENST00000616635 176 ntBASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 MFSD8-236ENST00000641509 4050 ntBASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDZRN3Q9UPQ7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDZRN3Q9UPQ7 RNU6-652P-201ENST00000365488 107 ntBASIC4.53□□□□□ -1.68
PDZRN3Q9UPQ7 Y_RNA.426-201ENST00000384068 113 ntBASIC4.53□□□□□ -1.68
PDZRN3Q9UPQ7 AC017083.1-201ENST00000428093 483 ntBASIC4.53□□□□□ -1.68
PDZRN3Q9UPQ7 Z75741.1-201ENST00000446793 314 ntBASIC4.53□□□□□ -1.68
PDZRN3Q9UPQ7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.53□□□□□ -1.68
PDZRN3Q9UPQ7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.53□□□□□ -1.68
PDZRN3Q9UPQ7 AC012493.2-201ENST00000595083 291 ntBASIC4.53□□□□□ -1.68
PDZRN3Q9UPQ7 AC136601.2-201ENST00000604356 474 ntBASIC4.53□□□□□ -1.68
PDZRN3Q9UPQ7 AL162713.1-201ENST00000604480 262 ntBASIC4.53□□□□□ -1.68
PDZRN3Q9UPQ7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PDZRN3Q9UPQ7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.53□□□□□ -1.68
PDZRN3Q9UPQ7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.53□□□□□ -1.69
PDZRN3Q9UPQ7 SNORD114-7-201ENST00000362520 77 ntBASIC4.52□□□□□ -1.69
PDZRN3Q9UPQ7 RNU6-1181P-201ENST00000384191 106 ntBASIC4.52□□□□□ -1.69
PDZRN3Q9UPQ7 SNORD116-22-201ENST00000384430 92 ntBASIC4.52□□□□□ -1.69
PDZRN3Q9UPQ7 RN7SKP111-201ENST00000410349 271 ntBASIC4.52□□□□□ -1.69
PDZRN3Q9UPQ7 Y_RNA.601-201ENST00000410500 113 ntBASIC4.52□□□□□ -1.69
PDZRN3Q9UPQ7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.52□□□□□ -1.69
PDZRN3Q9UPQ7 AL121603.1-201ENST00000553815 142 ntBASIC4.52□□□□□ -1.69
PDZRN3Q9UPQ7 AC107294.3-201ENST00000609211 526 ntBASIC4.52□□□□□ -1.69
PDZRN3Q9UPQ7 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.52□□□□□ -1.69
PDZRN3Q9UPQ7 AL162726.3-218ENST00000636401 95 ntBASIC4.52□□□□□ -1.69
PDZRN3Q9UPQ7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PDZRN3Q9UPQ7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDZRN3Q9UPQ7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDZRN3Q9UPQ7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
PDZRN3Q9UPQ7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.51□□□□□ -1.69
PDZRN3Q9UPQ7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
PDZRN3Q9UPQ7 RNU1-75P-201ENST00000347264 129 ntBASIC4.51□□□□□ -1.69
PDZRN3Q9UPQ7 Y_RNA.66-201ENST00000362862 102 ntBASIC4.51□□□□□ -1.69
PDZRN3Q9UPQ7 RNA5SP235-201ENST00000365411 114 ntBASIC4.51□□□□□ -1.69
PDZRN3Q9UPQ7 SNORA1-201ENST00000384107 130 ntBASIC4.51□□□□□ -1.69
PDZRN3Q9UPQ7 MIR128-1-201ENST00000384921 82 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms