Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 snoZ196.1-201ENST00000625269 89 ntBASIC3.43□□□□□ -1.86
AP4E1Q9UPM8 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
AP4E1Q9UPM8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
AP4E1Q9UPM8 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 AL356292.1-201ENST00000283110 373 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 RNA5SP119-201ENST00000362715 117 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 RNU6-674P-201ENST00000363831 107 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 SNORA25.7-201ENST00000364375 127 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 Y_RNA.280-201ENST00000364765 112 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 Y_RNA.294-201ENST00000364916 102 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 RNU6-1144P-201ENST00000384247 104 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 MIR300-201ENST00000401138 83 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 RNU6-1077P-201ENST00000410506 102 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 AC097463.2-201ENST00000421074 142 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 SNORD65B-201ENST00000459126 73 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 RNU6-221P-201ENST00000459541 99 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 MIR449C-201ENST00000516047 92 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 RNU6-197P-201ENST00000516680 100 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 RPL30P11-203ENST00000598995 310 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 AC005972.2-201ENST00000604690 348 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 AC006111.3-201ENST00000622137 383 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 MIR3914-2-201ENST00000637339 95 ntBASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.42□□□□□ -1.86
AP4E1Q9UPM8 Z83843.1-201ENST00000604070 3685 ntBASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 RNU6-1298P-201ENST00000362456 101 ntBASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 RNU6-978P-201ENST00000364371 103 ntBASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 RNU6-1336P-201ENST00000383886 109 ntBASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 RNU6-484P-201ENST00000384016 107 ntBASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 MIR183-201ENST00000384958 110 ntBASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 Z98742.2-201ENST00000431564 187 ntBASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 CST9LP2-201ENST00000437612 320 ntBASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 RPL23AP54-201ENST00000495129 419 ntBASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 CYCTP-201ENST00000504253 315 ntBASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 AC010598.1-201ENST00000510378 103 ntBASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 RNU6-772P-201ENST00000516042 105 ntBASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 Y_RNA.709-201ENST00000516952 92 ntBASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 AC090142.3-201ENST00000519012 385 ntBASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 U6.105-201ENST00000637379 88 ntBASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.41□□□□□ -1.86
AP4E1Q9UPM8 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 RNU6-975P-201ENST00000384296 105 ntBASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 SNORD14D-201ENST00000384390 87 ntBASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 MIR591-201ENST00000385290 95 ntBASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 Y_RNA.584-201ENST00000391090 114 ntBASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 RNA5SP496-201ENST00000391240 109 ntBASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 RNA5SP229-201ENST00000410809 99 ntBASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 AC245047.4-201ENST00000433189 144 ntBASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 RNU7-14P-201ENST00000459331 62 ntBASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 ATP5EP1-201ENST00000510257 156 ntBASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 SNORA31.1-201ENST00000515993 133 ntBASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 SNORA31.5-201ENST00000516190 133 ntBASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 RNU6-589P-201ENST00000516485 107 ntBASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 MIR4429-201ENST00000580105 73 ntBASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 MIR4753-201ENST00000585119 83 ntBASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
AP4E1Q9UPM8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 RNU6-235P-201ENST00000362644 107 ntBASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 RNU6-755P-201ENST00000364400 103 ntBASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 DYNLT3P1-201ENST00000378574 347 ntBASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 SNORA40.5-201ENST00000391061 128 ntBASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 Y_RNA.587-201ENST00000391210 103 ntBASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 SNORA79-201ENST00000408376 140 ntBASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 RNU6-63P-201ENST00000516690 95 ntBASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 AL160236.1-201ENST00000556317 195 ntBASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 AC008739.2-201ENST00000597006 317 ntBASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 AC008739.3-201ENST00000603262 127 ntBASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 AC090517.3-201ENST00000625170 141 ntBASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 MIR7153-201ENST00000637758 57 ntBASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
AP4E1Q9UPM8 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 SNORA71.3-201ENST00000362582 128 ntBASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 RNU6-944P-201ENST00000364023 107 ntBASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 RNU6-117P-201ENST00000365415 107 ntBASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 RNU6-1274P-201ENST00000384557 107 ntBASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 MIR670-201ENST00000390142 98 ntBASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 RNU6-57P-201ENST00000411348 103 ntBASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms