Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC022306.2-201ENST00000617563 647 ntBASIC2.94□□□□□ -1.94
SHROOM4Q9ULL8 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.94□□□□□ -1.94
SHROOM4Q9ULL8 AC099654.5-201ENST00000636479 350 ntBASIC2.94□□□□□ -1.94
SHROOM4Q9ULL8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SHROOM4Q9ULL8 RNU6-862P-201ENST00000362804 105 ntBASIC2.93□□□□□ -1.94
SHROOM4Q9ULL8 Y_RNA.166-201ENST00000363730 102 ntBASIC2.93□□□□□ -1.94
SHROOM4Q9ULL8 Y_RNA.179-201ENST00000363844 90 ntBASIC2.93□□□□□ -1.94
SHROOM4Q9ULL8 SNORA67.2-201ENST00000384300 149 ntBASIC2.93□□□□□ -1.94
SHROOM4Q9ULL8 AC009310.1-201ENST00000414414 451 ntBASIC2.93□□□□□ -1.94
SHROOM4Q9ULL8 AC016717.1-201ENST00000448918 286 ntBASIC2.93□□□□□ -1.94
SHROOM4Q9ULL8 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.93□□□□□ -1.94
SHROOM4Q9ULL8 AC093303.1-201ENST00000514549 295 ntBASIC2.93□□□□□ -1.94
SHROOM4Q9ULL8 CBX3P8-201ENST00000532412 525 ntBASIC2.93□□□□□ -1.94
SHROOM4Q9ULL8 AL353770.2-201ENST00000620024 78 ntBASIC2.93□□□□□ -1.94
SHROOM4Q9ULL8 RNU6-873P-201ENST00000363833 107 ntBASIC2.92□□□□□ -1.94
SHROOM4Q9ULL8 AC060773.1-201ENST00000421698 310 ntBASIC2.92□□□□□ -1.94
SHROOM4Q9ULL8 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.92□□□□□ -1.94
SHROOM4Q9ULL8 HMGN2P9-201ENST00000476875 229 ntBASIC2.92□□□□□ -1.94
SHROOM4Q9ULL8 AC092991.1-201ENST00000477176 376 ntBASIC2.92□□□□□ -1.94
SHROOM4Q9ULL8 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.92□□□□□ -1.94
SHROOM4Q9ULL8 AC011406.1-201ENST00000512440 370 ntBASIC2.92□□□□□ -1.94
SHROOM4Q9ULL8 RNU6-1041P-201ENST00000516254 102 ntBASIC2.92□□□□□ -1.94
SHROOM4Q9ULL8 RNA5SP384-201ENST00000516615 116 ntBASIC2.92□□□□□ -1.94
SHROOM4Q9ULL8 AC008749.1-201ENST00000597650 306 ntBASIC2.92□□□□□ -1.94
SHROOM4Q9ULL8 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.92□□□□□ -1.94
SHROOM4Q9ULL8 AL157834.3-201ENST00000615543 103 ntBASIC2.92□□□□□ -1.94
SHROOM4Q9ULL8 AC068205.3-201ENST00000636385 468 ntBASIC2.92□□□□□ -1.94
SHROOM4Q9ULL8 ZNF209P-201ENST00000593450 2304 ntBASIC2.92□□□□□ -1.94
SHROOM4Q9ULL8 AC068700.1-201ENST00000565862 3754 ntBASIC2.91□□□□□ -1.94
SHROOM4Q9ULL8 MIR96-201ENST00000362288 78 ntBASIC2.91□□□□□ -1.94
SHROOM4Q9ULL8 SNORA67.6-201ENST00000391093 99 ntBASIC2.91□□□□□ -1.94
SHROOM4Q9ULL8 RNA5SP100-201ENST00000410903 110 ntBASIC2.91□□□□□ -1.94
SHROOM4Q9ULL8 RNA5SP59-201ENST00000410922 110 ntBASIC2.91□□□□□ -1.94
SHROOM4Q9ULL8 EBAG9P1-201ENST00000418955 543 ntBASIC2.91□□□□□ -1.94
SHROOM4Q9ULL8 RPL23AP50-201ENST00000434149 455 ntBASIC2.91□□□□□ -1.94
SHROOM4Q9ULL8 HMGN1P7-201ENST00000491722 313 ntBASIC2.91□□□□□ -1.94
SHROOM4Q9ULL8 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.91□□□□□ -1.94
SHROOM4Q9ULL8 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.91□□□□□ -1.94
SHROOM4Q9ULL8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.91□□□□□ -1.94
SHROOM4Q9ULL8 AL355802.3-201ENST00000607571 545 ntBASIC2.91□□□□□ -1.94
SHROOM4Q9ULL8 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.91□□□□□ -1.94
SHROOM4Q9ULL8 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.91□□□□□ -1.94
SHROOM4Q9ULL8 MTND4P12-201ENST00000498999 1377 ntBASIC2.91□□□□□ -1.94
SHROOM4Q9ULL8 RNU6-342P-201ENST00000384521 104 ntBASIC2.9□□□□□ -1.94
SHROOM4Q9ULL8 AC138393.2-201ENST00000414742 246 ntBASIC2.9□□□□□ -1.94
SHROOM4Q9ULL8 AC007098.1-201ENST00000420122 367 ntBASIC2.9□□□□□ -1.94
SHROOM4Q9ULL8 MTCYBP10-201ENST00000424905 650 ntBASIC2.9□□□□□ -1.94
SHROOM4Q9ULL8 AC112492.4-201ENST00000456549 352 ntBASIC2.9□□□□□ -1.94
SHROOM4Q9ULL8 AC116353.2-201ENST00000505332 712 ntBASIC2.9□□□□□ -1.94
SHROOM4Q9ULL8 RNU1-117P-201ENST00000517041 158 ntBASIC2.9□□□□□ -1.94
SHROOM4Q9ULL8 AC009229.3-201ENST00000608056 282 ntBASIC2.9□□□□□ -1.94
SHROOM4Q9ULL8 RNY1P16-201ENST00000363063 111 ntBASIC2.9□□□□□ -1.95
SHROOM4Q9ULL8 AC103851.1-201ENST00000506833 274 ntBASIC2.9□□□□□ -1.95
SHROOM4Q9ULL8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.9□□□□□ -1.95
SHROOM4Q9ULL8 UBL5P4-201ENST00000562584 236 ntBASIC2.9□□□□□ -1.95
SHROOM4Q9ULL8 AC022254.1-201ENST00000567857 235 ntBASIC2.9□□□□□ -1.95
SHROOM4Q9ULL8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.9□□□□□ -1.95
SHROOM4Q9ULL8 Y_RNA.88-201ENST00000363029 99 ntBASIC2.89□□□□□ -1.95
SHROOM4Q9ULL8 MIR1253-201ENST00000408273 105 ntBASIC2.89□□□□□ -1.95
SHROOM4Q9ULL8 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.89□□□□□ -1.95
SHROOM4Q9ULL8 MTND3P10-201ENST00000450967 341 ntBASIC2.89□□□□□ -1.95
SHROOM4Q9ULL8 NDUFB4P10-201ENST00000452541 359 ntBASIC2.89□□□□□ -1.95
SHROOM4Q9ULL8 SNORA44.1-201ENST00000517031 108 ntBASIC2.89□□□□□ -1.95
SHROOM4Q9ULL8 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.89□□□□□ -1.95
SHROOM4Q9ULL8 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.89□□□□□ -1.95
SHROOM4Q9ULL8 snoZ196.1-201ENST00000625269 89 ntBASIC2.89□□□□□ -1.95
SHROOM4Q9ULL8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
SHROOM4Q9ULL8 RNU1-96P-201ENST00000364163 162 ntBASIC2.88□□□□□ -1.95
SHROOM4Q9ULL8 RNU6-1019P-201ENST00000364424 107 ntBASIC2.88□□□□□ -1.95
SHROOM4Q9ULL8 RNU6-793P-201ENST00000384233 104 ntBASIC2.88□□□□□ -1.95
SHROOM4Q9ULL8 Y_RNA.473-201ENST00000384333 102 ntBASIC2.88□□□□□ -1.95
SHROOM4Q9ULL8 SNORA75.4-201ENST00000391278 119 ntBASIC2.88□□□□□ -1.95
SHROOM4Q9ULL8 AC098614.3-201ENST00000438957 440 ntBASIC2.88□□□□□ -1.95
SHROOM4Q9ULL8 AC024614.2-201ENST00000577584 372 ntBASIC2.88□□□□□ -1.95
SHROOM4Q9ULL8 MIR5690-201ENST00000583739 73 ntBASIC2.88□□□□□ -1.95
SHROOM4Q9ULL8 MIR4448-201ENST00000584360 86 ntBASIC2.88□□□□□ -1.95
SHROOM4Q9ULL8 AL078603.1-201ENST00000603824 313 ntBASIC2.88□□□□□ -1.95
SHROOM4Q9ULL8 AC010999.1-201ENST00000611856 324 ntBASIC2.88□□□□□ -1.95
SHROOM4Q9ULL8 AC099654.14-201ENST00000638599 341 ntBASIC2.88□□□□□ -1.95
SHROOM4Q9ULL8 MIR190B-201ENST00000401119 79 ntBASIC2.87□□□□□ -1.95
SHROOM4Q9ULL8 RNU2-7P-201ENST00000410794 178 ntBASIC2.87□□□□□ -1.95
SHROOM4Q9ULL8 MTCO3P29-201ENST00000432119 779 ntBASIC2.87□□□□□ -1.95
SHROOM4Q9ULL8 UBE2V1P7-201ENST00000446395 340 ntBASIC2.87□□□□□ -1.95
SHROOM4Q9ULL8 AP000870.1-201ENST00000472927 406 ntBASIC2.87□□□□□ -1.95
SHROOM4Q9ULL8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.87□□□□□ -1.95
SHROOM4Q9ULL8 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.87□□□□□ -1.95
SHROOM4Q9ULL8 MIR3660-201ENST00000584845 100 ntBASIC2.87□□□□□ -1.95
SHROOM4Q9ULL8 U3.8-201ENST00000363675 217 ntBASIC2.86□□□□□ -1.95
SHROOM4Q9ULL8 SNORD81.2-201ENST00000365153 76 ntBASIC2.86□□□□□ -1.95
SHROOM4Q9ULL8 RNU6-57P-201ENST00000411348 103 ntBASIC2.86□□□□□ -1.95
SHROOM4Q9ULL8 MTND3P23-201ENST00000431980 347 ntBASIC2.86□□□□□ -1.95
SHROOM4Q9ULL8 HMGN1P13-201ENST00000505795 138 ntBASIC2.86□□□□□ -1.95
SHROOM4Q9ULL8 RN7SKP49-201ENST00000516675 260 ntBASIC2.86□□□□□ -1.95
SHROOM4Q9ULL8 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.86□□□□□ -1.95
SHROOM4Q9ULL8 AC090617.3-201ENST00000573670 475 ntBASIC2.86□□□□□ -1.95
SHROOM4Q9ULL8 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.86□□□□□ -1.95
SHROOM4Q9ULL8 AC022513.1-201ENST00000624512 117 ntBASIC2.86□□□□□ -1.95
SHROOM4Q9ULL8 TPTEP1-208ENST00000636884 213 ntBASIC2.86□□□□□ -1.95
SHROOM4Q9ULL8 AC080100.1-201ENST00000624239 5356 ntBASIC2.86□□□□□ -1.95
SHROOM4Q9ULL8 RNA5SP363-201ENST00000365072 115 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms