Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 AC110774.1-201ENST00000623567 2018 ntBASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 RNU1-23P-201ENST00000363361 144 ntBASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 SNORA25.7-201ENST00000364375 127 ntBASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 RNA5SP72-201ENST00000364442 117 ntBASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 SNORA73.2-201ENST00000364946 201 ntBASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 SNORA26-201ENST00000391286 122 ntBASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 RPL23AP83-201ENST00000434984 473 ntBASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 SNORD77.4-201ENST00000516158 81 ntBASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 RNU6-1234P-201ENST00000516877 103 ntBASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 SCARNA14-201ENST00000516903 136 ntBASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 MIR3186-201ENST00000577404 85 ntBASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 AL049861.1-201ENST00000603130 150 ntBASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 AL137849.1-201ENST00000604767 169 ntBASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 U3.45-201ENST00000607547 219 ntBASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 U2.20-201ENST00000613956 192 ntBASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 uc_338.4-201ENST00000616635 176 ntBASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 U6.73-201ENST00000619194 103 ntBASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 AC012314.7-201ENST00000619693 93 ntBASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
FOXD3Q9UJU5 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
FOXD3Q9UJU5 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.38□□□□□ -1.87
FOXD3Q9UJU5 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXD3Q9UJU5 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXD3Q9UJU5 RNU6-978P-201ENST00000364371 103 ntBASIC3.38□□□□□ -1.87
FOXD3Q9UJU5 RNU6-215P-201ENST00000365169 102 ntBASIC3.38□□□□□ -1.87
FOXD3Q9UJU5 MIR34B-201ENST00000385076 84 ntBASIC3.38□□□□□ -1.87
FOXD3Q9UJU5 Y_RNA.584-201ENST00000391090 114 ntBASIC3.38□□□□□ -1.87
FOXD3Q9UJU5 PRSS3P4-201ENST00000453323 162 ntBASIC3.38□□□□□ -1.87
FOXD3Q9UJU5 SNORD105B-201ENST00000458770 79 ntBASIC3.38□□□□□ -1.87
FOXD3Q9UJU5 RN7SKP179-201ENST00000516126 217 ntBASIC3.38□□□□□ -1.87
FOXD3Q9UJU5 RNU2-56P-201ENST00000516826 190 ntBASIC3.38□□□□□ -1.87
FOXD3Q9UJU5 AC097639.2-201ENST00000603159 172 ntBASIC3.38□□□□□ -1.87
FOXD3Q9UJU5 AC244205.2-202ENST00000635781 342 ntBASIC3.38□□□□□ -1.87
FOXD3Q9UJU5 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FOXD3Q9UJU5 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.38□□□□□ -1.87
FOXD3Q9UJU5 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FOXD3Q9UJU5 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.38□□□□□ -1.87
FOXD3Q9UJU5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 RNU6-743P-201ENST00000364151 106 ntBASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 RNU6-1082P-201ENST00000364574 107 ntBASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 U8.11-201ENST00000384699 133 ntBASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 MIR520G-201ENST00000385064 90 ntBASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 MIR561-201ENST00000385216 97 ntBASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 RPS29P4-201ENST00000414733 161 ntBASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 AL035423.1-201ENST00000420331 213 ntBASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 U8.18-201ENST00000459285 133 ntBASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 AC011604.1-201ENST00000545978 196 ntBASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 RPL23AP91-201ENST00000569211 455 ntBASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 MIR4662B-201ENST00000579498 81 ntBASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 MIR3117-201ENST00000584034 78 ntBASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 MIR3616-201ENST00000584070 92 ntBASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 MAPK10-362ENST00000641864 4484 ntBASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.37□□□□□ -1.87
FOXD3Q9UJU5 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 RNU6-915P-201ENST00000364943 103 ntBASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 RNU6-136P-201ENST00000384663 107 ntBASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 Y_RNA.563-201ENST00000384707 108 ntBASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 RNU2-48P-201ENST00000410694 191 ntBASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 SNORD11-201ENST00000459124 84 ntBASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 AC110768.1-201ENST00000509222 400 ntBASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 RNA5SP208-201ENST00000516156 78 ntBASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 RNU6-991P-201ENST00000516168 107 ntBASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 RNU6-659P-201ENST00000516454 104 ntBASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 RNU6-1231P-201ENST00000517185 103 ntBASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 SNORA62.6-201ENST00000606322 83 ntBASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 AC091953.5-201ENST00000622919 233 ntBASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FOXD3Q9UJU5 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
FOXD3Q9UJU5 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FOXD3Q9UJU5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXD3Q9UJU5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FOXD3Q9UJU5 MIR208A-201ENST00000362287 71 ntBASIC3.35□□□□□ -1.87
FOXD3Q9UJU5 Y_RNA.111-201ENST00000363248 100 ntBASIC3.35□□□□□ -1.87
FOXD3Q9UJU5 SNORD20-201ENST00000384550 80 ntBASIC3.35□□□□□ -1.87
FOXD3Q9UJU5 RNU2-70P-201ENST00000410718 179 ntBASIC3.35□□□□□ -1.87
FOXD3Q9UJU5 EEF1B2P7-201ENST00000451177 676 ntBASIC3.35□□□□□ -1.87
FOXD3Q9UJU5 AC106707.2-201ENST00000484182 374 ntBASIC3.35□□□□□ -1.87
FOXD3Q9UJU5 TRBV12-2-201ENST00000489763 344 ntBASIC3.35□□□□□ -1.87
FOXD3Q9UJU5 Y_RNA.686-201ENST00000516548 134 ntBASIC3.35□□□□□ -1.87
FOXD3Q9UJU5 AL355297.2-201ENST00000604792 129 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms