Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 RPS29P25-201ENST00000481709 171 ntBASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 RNU7-175P-201ENST00000515915 61 ntBASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 RNA5SP384-201ENST00000516615 116 ntBASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-566P-201ENST00000516790 107 ntBASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-1223P-201ENST00000517124 104 ntBASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-58P-201ENST00000517143 103 ntBASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 RNA5SP454-201ENST00000517231 127 ntBASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 MIR5696-201ENST00000578474 85 ntBASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 MIR151B-201ENST00000584249 96 ntBASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 MIR6788-201ENST00000618842 66 ntBASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 AC091812.1-201ENST00000432235 1948 ntBASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
NPC1L1Q9UHC9 Y_RNA.67-201ENST00000362870 100 ntBASIC1.52□□□□□ -2.17
NPC1L1Q9UHC9 MIR1253-201ENST00000408273 105 ntBASIC1.52□□□□□ -2.17
NPC1L1Q9UHC9 AC060773.1-201ENST00000421698 310 ntBASIC1.52□□□□□ -2.17
NPC1L1Q9UHC9 USMG5P1-201ENST00000425964 177 ntBASIC1.52□□□□□ -2.17
NPC1L1Q9UHC9 AC099677.2-201ENST00000436385 175 ntBASIC1.52□□□□□ -2.17
NPC1L1Q9UHC9 snoU13.9-201ENST00000458927 103 ntBASIC1.52□□□□□ -2.17
NPC1L1Q9UHC9 RNU7-57P-201ENST00000459540 60 ntBASIC1.52□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-273P-201ENST00000516937 96 ntBASIC1.52□□□□□ -2.17
NPC1L1Q9UHC9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.52□□□□□ -2.17
NPC1L1Q9UHC9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.52□□□□□ -2.17
NPC1L1Q9UHC9 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.52□□□□□ -2.17
NPC1L1Q9UHC9 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.52□□□□□ -2.17
NPC1L1Q9UHC9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.52□□□□□ -2.17
NPC1L1Q9UHC9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.52□□□□□ -2.17
NPC1L1Q9UHC9 AC073869.6-201ENST00000640656 341 ntBASIC1.52□□□□□ -2.17
NPC1L1Q9UHC9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
NPC1L1Q9UHC9 AC068700.1-201ENST00000565862 3754 ntBASIC1.52□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-831P-201ENST00000384548 107 ntBASIC1.51□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-296P-201ENST00000384608 107 ntBASIC1.51□□□□□ -2.17
NPC1L1Q9UHC9 MIR1267-201ENST00000408723 78 ntBASIC1.51□□□□□ -2.17
NPC1L1Q9UHC9 EIF1P1-201ENST00000421436 341 ntBASIC1.51□□□□□ -2.17
NPC1L1Q9UHC9 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.51□□□□□ -2.17
NPC1L1Q9UHC9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.51□□□□□ -2.17
NPC1L1Q9UHC9 NDUFB4P10-201ENST00000452541 359 ntBASIC1.51□□□□□ -2.17
NPC1L1Q9UHC9 AC092989.1-201ENST00000481235 277 ntBASIC1.51□□□□□ -2.17
NPC1L1Q9UHC9 SNORA25.14-201ENST00000516481 132 ntBASIC1.51□□□□□ -2.17
NPC1L1Q9UHC9 AC134698.4-201ENST00000523451 826 ntBASIC1.51□□□□□ -2.17
NPC1L1Q9UHC9 AC008269.2-201ENST00000561915 1105 ntBASIC1.51□□□□□ -2.17
NPC1L1Q9UHC9 AP001485.1-201ENST00000604799 199 ntBASIC1.51□□□□□ -2.17
NPC1L1Q9UHC9 AC002553.4-201ENST00000616896 331 ntBASIC1.51□□□□□ -2.17
NPC1L1Q9UHC9 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.51□□□□□ -2.17
NPC1L1Q9UHC9 AC139792.2-201ENST00000624218 587 ntBASIC1.51□□□□□ -2.17
NPC1L1Q9UHC9 snoZ196.1-201ENST00000625269 89 ntBASIC1.51□□□□□ -2.17
NPC1L1Q9UHC9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.51□□□□□ -2.17
NPC1L1Q9UHC9 AL161722.3-201ENST00000605789 2983 ntBASIC1.51□□□□□ -2.17
NPC1L1Q9UHC9 ZNF299P-201ENST00000406845 1804 ntBASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 snoU2-30.2-201ENST00000362805 70 ntBASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-17P-201ENST00000384245 107 ntBASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-18P-201ENST00000384527 107 ntBASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 MIR549A-201ENST00000385268 96 ntBASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 RNU1-78P-201ENST00000391248 165 ntBASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 AL117342.1-201ENST00000404861 406 ntBASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 MIR548J-201ENST00000408833 112 ntBASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 AC004866.1-201ENST00000411748 78 ntBASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 FCF1P9-201ENST00000412546 282 ntBASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 C8orf59P1-201ENST00000429930 303 ntBASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 AC016717.1-201ENST00000448918 286 ntBASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 MTND1P17-201ENST00000448961 204 ntBASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 AL590705.4-201ENST00000532209 134 ntBASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 AC018638.8-201ENST00000588755 281 ntBASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 MIR338-201ENST00000636369 67 ntBASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 AC068205.3-201ENST00000636385 468 ntBASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 AC068137.4-201ENST00000638485 296 ntBASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
NPC1L1Q9UHC9 SNORA63D-201ENST00000364359 132 ntBASIC1.49□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-338P-201ENST00000383888 105 ntBASIC1.49□□□□□ -2.17
NPC1L1Q9UHC9 SNORA67.2-201ENST00000384300 149 ntBASIC1.49□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-306P-201ENST00000384617 107 ntBASIC1.49□□□□□ -2.17
NPC1L1Q9UHC9 MIR222-201ENST00000384992 110 ntBASIC1.49□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-57P-201ENST00000411348 103 ntBASIC1.49□□□□□ -2.17
NPC1L1Q9UHC9 AC243428.1-201ENST00000421099 264 ntBASIC1.49□□□□□ -2.17
NPC1L1Q9UHC9 AC245047.4-201ENST00000433189 144 ntBASIC1.49□□□□□ -2.17
NPC1L1Q9UHC9 Z82188.1-201ENST00000436709 154 ntBASIC1.49□□□□□ -2.17
NPC1L1Q9UHC9 HSPE1P9-201ENST00000440046 311 ntBASIC1.49□□□□□ -2.17
NPC1L1Q9UHC9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.49□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-718P-201ENST00000516166 105 ntBASIC1.49□□□□□ -2.17
NPC1L1Q9UHC9 RNU1-117P-201ENST00000517041 158 ntBASIC1.49□□□□□ -2.17
NPC1L1Q9UHC9 SNORA59B-202ENST00000578183 701 ntBASIC1.49□□□□□ -2.17
NPC1L1Q9UHC9 MIR4422-201ENST00000581938 83 ntBASIC1.49□□□□□ -2.17
NPC1L1Q9UHC9 AC126177.8-201ENST00000618339 1015 ntBASIC1.49□□□□□ -2.17
NPC1L1Q9UHC9 U3.8-201ENST00000363675 217 ntBASIC1.48□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-593P-201ENST00000364716 112 ntBASIC1.48□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-342P-201ENST00000384521 104 ntBASIC1.48□□□□□ -2.17
NPC1L1Q9UHC9 MIR548F1-201ENST00000408667 84 ntBASIC1.48□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
NPC1L1Q9UHC9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.48□□□□□ -2.17
NPC1L1Q9UHC9 JTBP1-201ENST00000441314 247 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms