Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 OR2AQ1P-201ENST00000451972 200 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 RNU7-169P-201ENST00000459456 61 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.680-201ENST00000516441 93 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.721-201ENST00000517207 102 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 AC103996.1-201ENST00000555468 102 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 MIR1244-1-201ENST00000612829 85 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 MIR1248-201ENST00000629190 106 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 MIR1244-3-201ENST00000635744 85 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 SNORD98-201ENST00000636377 67 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 MIR1244-2-201ENST00000636449 85 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 MIR1244-4-202ENST00000636813 85 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 AC005592.1-201ENST00000566527 1640 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.99-201ENST00000363138 105 ntBASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 RNU6-1164P-201ENST00000364428 107 ntBASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.389-201ENST00000383924 113 ntBASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.574-201ENST00000384766 95 ntBASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 SNORA26.3-201ENST00000391119 136 ntBASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 BX510359.4-201ENST00000423750 193 ntBASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 UBE2V1P4-201ENST00000425374 344 ntBASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 RPL23AP95-201ENST00000426806 265 ntBASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 RPL23AP50-201ENST00000434149 455 ntBASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 AL731563.1-201ENST00000442202 214 ntBASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 PCNPP5-201ENST00000452246 481 ntBASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 PCMTD1P1-201ENST00000455560 355 ntBASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 AC112492.4-201ENST00000456549 352 ntBASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 MRPS35P2-201ENST00000508242 191 ntBASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 SNORD116.3-201ENST00000517176 78 ntBASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 MIR4713-201ENST00000582691 75 ntBASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 AC133104.2-201ENST00000615272 193 ntBASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 MIR4272-201ENST00000635924 64 ntBASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CLIP2Q9UDT6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.105-201ENST00000363182 111 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.210-201ENST00000364161 110 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.314-201ENST00000365114 102 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 RNU6-1318P-201ENST00000365389 103 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.428-201ENST00000384078 102 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 RNU6-472P-201ENST00000384299 107 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 RNU6-790P-201ENST00000384479 105 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 BTF3L4P2-201ENST00000392798 346 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.595-201ENST00000410403 105 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 BTF3P4-201ENST00000418852 495 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 EIF4EP2-201ENST00000422816 654 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 AC244670.1-201ENST00000436879 112 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 AC132942.1-201ENST00000486753 483 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 AC114801.2-201ENST00000503825 781 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 AC093259.1-201ENST00000509755 300 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 CPDP1-201ENST00000579660 283 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 MIR5188-201ENST00000583467 113 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 7SK.7-201ENST00000603504 247 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 U1.36-201ENST00000620684 176 ntBASIC1.88□□□□□ -2.11
CLIP2Q9UDT6 RNU1-58P-201ENST00000362413 163 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 SNORD50.1-201ENST00000362987 71 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 RNU6-1026P-201ENST00000384465 108 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 MT-TW-201ENST00000387382 68 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 RNU6-1109P-201ENST00000391187 107 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 MTCYBP2-201ENST00000407745 171 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 MIR1302-3-201ENST00000408128 138 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 RNU6-1156P-201ENST00000410365 100 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 RN7SKP101-201ENST00000411376 320 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 ELOCP20-201ENST00000422460 345 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 MTND3P9-201ENST00000429526 346 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 MTCO3P29-201ENST00000432119 779 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 AC108059.2-201ENST00000434626 151 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 HSPE1P21-201ENST00000438283 308 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 AC145146.1-201ENST00000496370 254 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 AK3P2-201ENST00000507976 429 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 MTND1P19-201ENST00000511780 315 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 AC131281.1-201ENST00000522984 164 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 SUB1P3-201ENST00000564581 315 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 RAC1P9-201ENST00000604990 392 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 AL606534.2-204ENST00000635008 178 ntBASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
CLIP2Q9UDT6 AC092268.1-201ENST00000342691 405 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.64-201ENST00000362845 102 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 RNY1P16-201ENST00000363063 111 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.149-201ENST00000363558 117 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 RNU1-42P-201ENST00000364033 160 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 RNU6-743P-201ENST00000364151 106 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 314 ms