Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC022616.3-201ENST00000523940 148 ntBASIC-0.27□□□□□ -2.45
COMMD3Q9UBI1 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
COMMD3Q9UBI1 AP003181.2-201ENST00000528941 181 ntBASIC-0.27□□□□□ -2.45
COMMD3Q9UBI1 AP002004.2-201ENST00000531656 154 ntBASIC-0.27□□□□□ -2.45
COMMD3Q9UBI1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.27□□□□□ -2.45
COMMD3Q9UBI1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.27□□□□□ -2.45
COMMD3Q9UBI1 RPL23AP91-201ENST00000569211 455 ntBASIC-0.27□□□□□ -2.45
COMMD3Q9UBI1 SNORA25.18-201ENST00000607153 114 ntBASIC-0.27□□□□□ -2.45
COMMD3Q9UBI1 AC104010.1-201ENST00000616889 150 ntBASIC-0.27□□□□□ -2.45
COMMD3Q9UBI1 AL031667.3-201ENST00000620124 655 ntBASIC-0.27□□□□□ -2.45
COMMD3Q9UBI1 AC011155.2-201ENST00000623202 216 ntBASIC-0.27□□□□□ -2.45
COMMD3Q9UBI1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.27□□□□□ -2.45
COMMD3Q9UBI1 SCARNA4-201ENST00000629045 128 ntBASIC-0.27□□□□□ -2.45
COMMD3Q9UBI1 SNORA1B-201ENST00000362535 133 ntBASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 SNORA2B-201ENST00000384583 137 ntBASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 MIR1302-7-201ENST00000408841 72 ntBASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 RNA5SP494-201ENST00000410653 129 ntBASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 RNU6-276P-201ENST00000516114 96 ntBASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 SNORA74.3-201ENST00000517108 154 ntBASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 RNU6-58P-201ENST00000517143 103 ntBASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 MTCO3P23-201ENST00000561363 289 ntBASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 MIR3678-201ENST00000578455 94 ntBASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 AC091178.2-201ENST00000584401 117 ntBASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 SNORD11B-201ENST00000607707 90 ntBASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 AC027279.3-201ENST00000625055 122 ntBASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 ZNF204P-201ENST00000416749 2397 ntBASIC-0.28□□□□□ -2.45
COMMD3Q9UBI1 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 RNU6-266P-201ENST00000364225 107 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 RNU6-533P-201ENST00000384144 107 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 SNORA8.2-201ENST00000384372 139 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 MIR520C-201ENST00000385005 87 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 MIR452-201ENST00000385020 85 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 MIR644A-201ENST00000385262 94 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 MRPL42P2-201ENST00000403169 426 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 AL590632.1-201ENST00000424289 371 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 MTCO2P3-201ENST00000442543 421 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 PCNPP5-201ENST00000452246 481 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 RNU2-69P-201ENST00000516061 100 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 MTND4LP18-201ENST00000526864 291 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 HIF1AP1-201ENST00000553642 175 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 AC002044.1-201ENST00000606707 158 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 AC010999.1-201ENST00000611856 324 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 MIR1295B-201ENST00000636144 60 ntBASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.29□□□□□ -2.46
COMMD3Q9UBI1 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 RNU6-716P-201ENST00000365621 103 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 MIR1197-201ENST00000408818 88 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 RNU6-757P-201ENST00000410334 100 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 RNU4-46P-201ENST00000410818 138 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 MTND1P4-201ENST00000435196 415 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 RPS29P27-201ENST00000463711 170 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 AC005178.1-201ENST00000508392 440 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 AC097462.1-201ENST00000514125 324 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 SNORA19.3-201ENST00000516165 130 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 RNU7-43P-201ENST00000516554 64 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 RNU2-46P-201ENST00000517038 113 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 RNU1-117P-201ENST00000517041 158 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 AC104383.1-201ENST00000530297 370 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 MIR548AO-201ENST00000579992 96 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 MIR4743-201ENST00000584576 69 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 BNIP3P39-201ENST00000601077 554 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 AC009159.2-201ENST00000617603 606 ntBASIC-0.3□□□□□ -2.46
COMMD3Q9UBI1 SNORA9.1-201ENST00000362412 131 ntBASIC-0.31□□□□□ -2.46
COMMD3Q9UBI1 RNU6-227P-201ENST00000362865 103 ntBASIC-0.31□□□□□ -2.46
COMMD3Q9UBI1 RNU6V-201ENST00000384105 107 ntBASIC-0.31□□□□□ -2.46
COMMD3Q9UBI1 RNU6-434P-201ENST00000384376 107 ntBASIC-0.31□□□□□ -2.46
COMMD3Q9UBI1 RNU6-393P-201ENST00000384475 107 ntBASIC-0.31□□□□□ -2.46
COMMD3Q9UBI1 MIR610-201ENST00000385139 96 ntBASIC-0.31□□□□□ -2.46
COMMD3Q9UBI1 SNORA75.6-201ENST00000391318 127 ntBASIC-0.31□□□□□ -2.46
COMMD3Q9UBI1 MTCO3P19-201ENST00000415864 321 ntBASIC-0.31□□□□□ -2.46
COMMD3Q9UBI1 MTND4LP16-201ENST00000440828 295 ntBASIC-0.31□□□□□ -2.46
COMMD3Q9UBI1 RNU7-182P-201ENST00000459009 62 ntBASIC-0.31□□□□□ -2.46
COMMD3Q9UBI1 RPL23AP54-201ENST00000495129 419 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms