Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 HMGN2P34-201ENST00000437647 269 ntBASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 AC007677.1-201ENST00000445757 515 ntBASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 RNA5SP57-201ENST00000459463 123 ntBASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 RNU6-221P-201ENST00000459541 99 ntBASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 Y_RNA.631-201ENST00000459607 101 ntBASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 MIR5188-201ENST00000583467 113 ntBASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 AC005786.1-201ENST00000588553 154 ntBASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 AC011476.5-201ENST00000615594 130 ntBASIC2.09□□□□□ -2.07
HCN3Q9P1Z3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
HCN3Q9P1Z3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
HCN3Q9P1Z3 AC009487.4-201ENST00000624969 3585 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 RNU6-862P-201ENST00000362804 105 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 SNORA6-201ENST00000384033 151 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 RNU6-474P-201ENST00000384243 107 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 SNORD78.2-201ENST00000391076 69 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 RNA5SP475-201ENST00000410568 110 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 MCFD2P1-201ENST00000417812 300 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 AC008134.1-201ENST00000420943 193 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 DPH3P2-201ENST00000422618 250 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 TOMM22P2-201ENST00000430735 237 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 FCF1P4-201ENST00000448326 183 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 snoU13.23-201ENST00000458863 104 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 AC025647.1-201ENST00000517879 253 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 AC023442.1-201ENST00000531247 422 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 MIR5694-201ENST00000581190 76 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 RPS29P30-201ENST00000600975 111 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 SNORD58B-201ENST00000607313 66 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 U1.36-201ENST00000620684 176 ntBASIC2.08□□□□□ -2.08
HCN3Q9P1Z3 Y_RNA.27-201ENST00000362540 103 ntBASIC2.07□□□□□ -2.08
HCN3Q9P1Z3 Y_RNA.128-201ENST00000363391 112 ntBASIC2.07□□□□□ -2.08
HCN3Q9P1Z3 RNU6-1240P-201ENST00000365155 104 ntBASIC2.07□□□□□ -2.08
HCN3Q9P1Z3 RNU6-1264P-201ENST00000383891 107 ntBASIC2.07□□□□□ -2.08
HCN3Q9P1Z3 SNORA11.4-201ENST00000408823 129 ntBASIC2.07□□□□□ -2.08
HCN3Q9P1Z3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.07□□□□□ -2.08
HCN3Q9P1Z3 RNVU1-2-201ENST00000516326 135 ntBASIC2.07□□□□□ -2.08
HCN3Q9P1Z3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.07□□□□□ -2.08
HCN3Q9P1Z3 MIR1273D-201ENST00000577266 86 ntBASIC2.07□□□□□ -2.08
HCN3Q9P1Z3 MIR5094-201ENST00000578766 85 ntBASIC2.07□□□□□ -2.08
HCN3Q9P1Z3 MIR4659A-201ENST00000580269 81 ntBASIC2.07□□□□□ -2.08
HCN3Q9P1Z3 AL109918.3-201ENST00000603072 338 ntBASIC2.07□□□□□ -2.08
HCN3Q9P1Z3 AC009831.4-201ENST00000620744 325 ntBASIC2.07□□□□□ -2.08
HCN3Q9P1Z3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.07□□□□□ -2.08
HCN3Q9P1Z3 AC134503.1-201ENST00000633048 54 ntBASIC2.07□□□□□ -2.08
HCN3Q9P1Z3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
HCN3Q9P1Z3 RNU1-96P-201ENST00000364163 162 ntBASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 RNU6-417P-201ENST00000384712 107 ntBASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 PMCHL1-202ENST00000423102 261 ntBASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 RAB28P5-201ENST00000427490 651 ntBASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 MTND2P29-201ENST00000438595 412 ntBASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 AL353689.1-201ENST00000438895 199 ntBASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 MTND4P19-201ENST00000446659 478 ntBASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 RPS29P21-201ENST00000496272 170 ntBASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 AC010469.2-201ENST00000496412 480 ntBASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 RNU6-1146P-201ENST00000516282 102 ntBASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 Y_RNA.701-201ENST00000516812 110 ntBASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 RNU6-988P-201ENST00000519081 107 ntBASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 AC027419.1-201ENST00000522976 328 ntBASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 U6.92-201ENST00000636464 89 ntBASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 AC091812.1-201ENST00000432235 1948 ntBASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
HCN3Q9P1Z3 AL596028.1-201ENST00000326971 197 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 RNA5SP37-201ENST00000365420 130 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 Y_RNA.424-201ENST00000384063 103 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 RNU4-52P-201ENST00000384209 138 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 AL512604.1-201ENST00000404812 257 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 MIR548P-201ENST00000408336 84 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 AC016909.1-201ENST00000415916 166 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 MTND1P14-201ENST00000427400 950 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 SNORA25.10-201ENST00000515926 124 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 SNORA40.14-201ENST00000516543 86 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 DEFB122-202ENST00000569013 197 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 U2.15-201ENST00000611544 191 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 U2.16-201ENST00000613119 191 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 U2.12-201ENST00000613778 191 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 U2.20-201ENST00000613956 192 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 U2.9-201ENST00000615427 191 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 U2.11-201ENST00000616345 191 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 U2.2-201ENST00000616535 191 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms