Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 MIR376A1-201ENST00000616574 68 ntBASIC2.42□□□□□ -2.02
NCKIPSDQ9NZQ3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 snoU2_19.2-201ENST00000363024 80 ntBASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 Y_RNA.143-201ENST00000363520 106 ntBASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 Y_RNA.416-201ENST00000384014 113 ntBASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 MIR1294-201ENST00000408503 142 ntBASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 AC009963.1-201ENST00000417265 157 ntBASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 AC010095.1-201ENST00000443543 144 ntBASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 snoU13.26-201ENST00000459452 105 ntBASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 AC091179.3-201ENST00000474761 144 ntBASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU6-965P-201ENST00000516721 96 ntBASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU6-1198P-201ENST00000516904 67 ntBASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 RNA5SP54-201ENST00000516951 92 ntBASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 AC012433.1-201ENST00000588916 398 ntBASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NCKIPSDQ9NZQ3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.4□□□□□ -2.02
NCKIPSDQ9NZQ3 AL391987.6-201ENST00000305671 199 ntBASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 SNORD114-30-201ENST00000364448 72 ntBASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-937P-201ENST00000384325 106 ntBASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-102P-201ENST00000384485 104 ntBASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU4-70P-201ENST00000384579 139 ntBASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 MIR504-201ENST00000385065 83 ntBASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.673-201ENST00000516306 88 ntBASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 SNORA25.14-201ENST00000516481 132 ntBASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 IGKV3-31-201ENST00000523109 329 ntBASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 EIF4A1P12-201ENST00000551910 141 ntBASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 MIR5194-201ENST00000582634 120 ntBASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 MZT1P2-201ENST00000604387 248 ntBASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 AP001282.2-201ENST00000616149 309 ntBASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.4□□□□□ -2.03
NCKIPSDQ9NZQ3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 AC016717.2-201ENST00000609089 5141 ntBASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 MIR21-201ENST00000362134 72 ntBASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-961P-201ENST00000363893 105 ntBASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU1-91P-201ENST00000364746 163 ntBASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU1-51P-201ENST00000365345 176 ntBASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.352-201ENST00000365439 102 ntBASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.477-201ENST00000384352 108 ntBASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 AC005002.2-201ENST00000438228 269 ntBASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 SNORA40.9-201ENST00000515895 93 ntBASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.700-201ENST00000516806 100 ntBASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 IGLV3-17-201ENST00000519099 244 ntBASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 AC022616.8-201ENST00000533569 253 ntBASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 RRN3P3-201ENST00000549207 578 ntBASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 AC055872.1-201ENST00000570978 278 ntBASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 AC010999.1-201ENST00000611856 324 ntBASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 Z82209.1-201ENST00000422141 2135 ntBASIC2.39□□□□□ -2.03
NCKIPSDQ9NZQ3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-280P-201ENST00000364145 104 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-743P-201ENST00000364151 106 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-200P-201ENST00000364743 107 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 SNORA25B-201ENST00000365507 128 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 SNORA18.2-201ENST00000383865 132 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 SNORD63-201ENST00000384262 68 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.581-201ENST00000391017 97 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 MIR548I3-201ENST00000408378 149 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 MIR548I1-201ENST00000408810 149 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 RNA5SP504-201ENST00000410676 117 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 Z98742.3-201ENST00000418637 326 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 MIR449C-201ENST00000516047 92 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 AC021269.2-201ENST00000532318 330 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 AC018630.3-201ENST00000542637 96 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 MIR1273D-201ENST00000577266 86 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 MIR4648-201ENST00000580107 72 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 MIR4423-201ENST00000580922 80 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 AC067747.1-201ENST00000608026 250 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 MIR1291-201ENST00000627649 87 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 AC005336.3-201ENST00000623833 2679 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 AC007336.1-201ENST00000576365 3828 ntBASIC2.38□□□□□ -2.03
NCKIPSDQ9NZQ3 MTND5P35-201ENST00000557537 1720 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-727P-201ENST00000363592 107 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.237-201ENST00000364439 102 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 SNORD32B-201ENST00000364460 84 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-245P-201ENST00000384020 107 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.462-201ENST00000384268 102 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.785-201ENST00000384290 109 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 SNORD58.1-201ENST00000391313 66 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 AC007064.1-201ENST00000412238 351 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms