Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
UBP1Q9NZI7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
UBP1Q9NZI7 AC134026.1-201ENST00000623249 2239 ntBASIC3.21□□□□□ -1.89
UBP1Q9NZI7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.21□□□□□ -1.89
UBP1Q9NZI7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
UBP1Q9NZI7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
UBP1Q9NZI7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
UBP1Q9NZI7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.21□□□□□ -1.9
UBP1Q9NZI7 RNA5SP383-201ENST00000362934 120 ntBASIC3.21□□□□□ -1.9
UBP1Q9NZI7 RNU6-103P-201ENST00000363686 107 ntBASIC3.21□□□□□ -1.9
UBP1Q9NZI7 RNU6-312P-201ENST00000364629 107 ntBASIC3.21□□□□□ -1.9
UBP1Q9NZI7 RNA5SP267-201ENST00000364893 126 ntBASIC3.21□□□□□ -1.9
UBP1Q9NZI7 MIR518C-201ENST00000384822 101 ntBASIC3.21□□□□□ -1.9
UBP1Q9NZI7 MIR626-201ENST00000385032 94 ntBASIC3.21□□□□□ -1.9
UBP1Q9NZI7 RNU6-381P-201ENST00000391259 108 ntBASIC3.21□□□□□ -1.9
UBP1Q9NZI7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.21□□□□□ -1.9
UBP1Q9NZI7 RNU6-255P-201ENST00000516957 105 ntBASIC3.21□□□□□ -1.9
UBP1Q9NZI7 AC021269.2-201ENST00000532318 330 ntBASIC3.21□□□□□ -1.9
UBP1Q9NZI7 MIR7112-201ENST00000616126 65 ntBASIC3.21□□□□□ -1.9
UBP1Q9NZI7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.21□□□□□ -1.9
UBP1Q9NZI7 CENPCP1-201ENST00000533085 2578 ntBASIC3.21□□□□□ -1.9
UBP1Q9NZI7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.21□□□□□ -1.9
UBP1Q9NZI7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.21□□□□□ -1.9
UBP1Q9NZI7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.21□□□□□ -1.9
UBP1Q9NZI7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.2□□□□□ -1.9
UBP1Q9NZI7 Y_RNA.75-201ENST00000362927 97 ntBASIC3.2□□□□□ -1.9
UBP1Q9NZI7 Y_RNA.441-201ENST00000384123 112 ntBASIC3.2□□□□□ -1.9
UBP1Q9NZI7 MIR627-201ENST00000384979 97 ntBASIC3.2□□□□□ -1.9
UBP1Q9NZI7 RNA5SP120-201ENST00000410900 112 ntBASIC3.2□□□□□ -1.9
UBP1Q9NZI7 RPL32P35-201ENST00000415214 394 ntBASIC3.2□□□□□ -1.9
UBP1Q9NZI7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.2□□□□□ -1.9
UBP1Q9NZI7 AC091021.1-201ENST00000468051 388 ntBASIC3.2□□□□□ -1.9
UBP1Q9NZI7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.2□□□□□ -1.9
UBP1Q9NZI7 RNU6-991P-201ENST00000516168 107 ntBASIC3.2□□□□□ -1.9
UBP1Q9NZI7 RNU7-116P-201ENST00000516940 62 ntBASIC3.2□□□□□ -1.9
UBP1Q9NZI7 RNU6-856P-201ENST00000516959 98 ntBASIC3.2□□□□□ -1.9
UBP1Q9NZI7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.2□□□□□ -1.9
UBP1Q9NZI7 MIR548AY-201ENST00000617669 107 ntBASIC3.2□□□□□ -1.9
UBP1Q9NZI7 U4atac.1-201ENST00000618345 95 ntBASIC3.2□□□□□ -1.9
UBP1Q9NZI7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.19□□□□□ -1.9
UBP1Q9NZI7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.19□□□□□ -1.9
UBP1Q9NZI7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UBP1Q9NZI7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
UBP1Q9NZI7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBP1Q9NZI7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UBP1Q9NZI7 RNU6-1323P-201ENST00000384025 107 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 RNU2-2P-201ENST00000410396 191 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 AC016909.1-201ENST00000415916 166 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 RN7SL863P-201ENST00000462370 296 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 RNU7-115P-201ENST00000516433 55 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 Y_RNA.703-201ENST00000516846 111 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 RNU6-667P-201ENST00000517186 102 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.19□□□□□ -1.9
UBP1Q9NZI7 MIR5680-201ENST00000577577 84 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 AP003357.1-201ENST00000604497 148 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 AC005972.2-201ENST00000604690 348 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 RNU2-4P-201ENST00000606190 192 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 AC004832.4-201ENST00000608952 331 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 AC108706.1-201ENST00000611053 297 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 U2.15-201ENST00000611544 191 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 U2.16-201ENST00000613119 191 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 U2.12-201ENST00000613778 191 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 U2.9-201ENST00000615427 191 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 U2.11-201ENST00000616345 191 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 U2.2-201ENST00000616535 191 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 U2.3-201ENST00000617785 191 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 U2.19-201ENST00000618602 191 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 RNU2-1-201ENST00000618664 191 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 U2.6-201ENST00000619225 191 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 U2.5-201ENST00000619465 191 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 U2.10-201ENST00000620268 191 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 AC068647.2-201ENST00000637380 353 ntBASIC3.19□□□□□ -1.9
UBP1Q9NZI7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBP1Q9NZI7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.19□□□□□ -1.9
UBP1Q9NZI7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.19□□□□□ -1.9
UBP1Q9NZI7 Y_RNA.23-201ENST00000362496 106 ntBASIC3.18□□□□□ -1.9
UBP1Q9NZI7 Y_RNA.172-201ENST00000363765 102 ntBASIC3.18□□□□□ -1.9
UBP1Q9NZI7 RNA5SP72-201ENST00000364442 117 ntBASIC3.18□□□□□ -1.9
UBP1Q9NZI7 RNU6-394P-201ENST00000410735 107 ntBASIC3.18□□□□□ -1.9
UBP1Q9NZI7 SRIP3-201ENST00000413200 219 ntBASIC3.18□□□□□ -1.9
UBP1Q9NZI7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.18□□□□□ -1.9
UBP1Q9NZI7 AL445687.1-201ENST00000439946 251 ntBASIC3.18□□□□□ -1.9
UBP1Q9NZI7 AC025750.2-201ENST00000442609 450 ntBASIC3.18□□□□□ -1.9
UBP1Q9NZI7 RPS27P29-201ENST00000463110 252 ntBASIC3.18□□□□□ -1.9
UBP1Q9NZI7 AP001486.1-201ENST00000463339 476 ntBASIC3.18□□□□□ -1.9
UBP1Q9NZI7 RPS27AP9-201ENST00000477681 438 ntBASIC3.18□□□□□ -1.9
UBP1Q9NZI7 AC018868.1-201ENST00000491307 315 ntBASIC3.18□□□□□ -1.9
UBP1Q9NZI7 AC005840.1-201ENST00000498412 377 ntBASIC3.18□□□□□ -1.9
UBP1Q9NZI7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.18□□□□□ -1.9
UBP1Q9NZI7 AC093331.1-201ENST00000521474 169 ntBASIC3.18□□□□□ -1.9
UBP1Q9NZI7 UBL5P2-201ENST00000583788 219 ntBASIC3.18□□□□□ -1.9
UBP1Q9NZI7 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.18□□□□□ -1.9
UBP1Q9NZI7 SNORA50A-202ENST00000629536 136 ntBASIC3.18□□□□□ -1.9
UBP1Q9NZI7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBP1Q9NZI7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UBP1Q9NZI7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBP1Q9NZI7 Y_RNA.182-201ENST00000363880 111 ntBASIC3.17□□□□□ -1.9
UBP1Q9NZI7 RNA5SP125-201ENST00000364843 120 ntBASIC3.17□□□□□ -1.9
UBP1Q9NZI7 U8.7-201ENST00000364940 136 ntBASIC3.17□□□□□ -1.9
UBP1Q9NZI7 SNORA25B-201ENST00000365507 128 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms