Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RNU6-1305P-201ENST00000364353 104 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 RNU6-438P-201ENST00000365561 103 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 RNU6-611P-201ENST00000384276 104 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 Y_RNA.645-201ENST00000391229 102 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
NDE1Q9NXR1 AL357139.1-201ENST00000407792 426 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 AL135786.1-201ENST00000415892 214 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.79□□□□□ -2.12
NDE1Q9NXR1 AC016717.1-201ENST00000448918 286 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 AC010469.2-201ENST00000496412 480 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 Y_RNA.683-201ENST00000516508 93 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 RNU6-1137P-201ENST00000517073 99 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NDE1Q9NXR1 NDUFA5P6-201ENST00000542110 379 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 AK6P2-201ENST00000549020 471 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 AL442163.3-201ENST00000554110 156 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.79□□□□□ -2.12
NDE1Q9NXR1 AC078899.2-201ENST00000595282 212 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 SNORD11B-201ENST00000607707 90 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 AC099654.10-201ENST00000640395 161 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 AC005592.1-201ENST00000566527 1640 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
NDE1Q9NXR1 ZNF355P-201ENST00000427301 3216 ntBASIC1.79□□□□□ -2.12
NDE1Q9NXR1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NDE1Q9NXR1 Y_RNA.326-201ENST00000365176 113 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 SNORA33.2-201ENST00000365413 134 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 SNORA67.2-201ENST00000384300 149 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 Y_RNA.527-201ENST00000384573 102 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 MRPL42P3-201ENST00000401492 326 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 SNORA3.2-201ENST00000408221 125 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 MIR1283-1-201ENST00000408494 87 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 RNA5SP425-201ENST00000410336 112 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 RNU2-20P-201ENST00000410425 191 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 SNORD12B-201ENST00000410433 91 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 AL356320.1-201ENST00000429616 163 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.78□□□□□ -2.12
NDE1Q9NXR1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.78□□□□□ -2.12
NDE1Q9NXR1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.78□□□□□ -2.12
NDE1Q9NXR1 AC112492.4-201ENST00000456549 352 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 snoU13.15-201ENST00000459407 104 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 HMGN2P9-201ENST00000476875 229 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 SNORA25.10-201ENST00000515926 124 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 RNU6-344P-201ENST00000516635 111 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.78□□□□□ -2.12
NDE1Q9NXR1 MIR3126-201ENST00000577443 74 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 MIR4299-201ENST00000577899 72 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 MIR4529-201ENST00000578110 78 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 AC104695.3-201ENST00000604052 296 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 AL353621.2-201ENST00000605340 133 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.78□□□□□ -2.12
NDE1Q9NXR1 U6.92-201ENST00000636464 89 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 MIR219B-201ENST00000637023 88 ntBASIC1.78□□□□□ -2.12
NDE1Q9NXR1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
NDE1Q9NXR1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.77□□□□□ -2.13
NDE1Q9NXR1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
NDE1Q9NXR1 RNA5SP289-201ENST00000362332 137 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 RNU1-62P-201ENST00000362599 164 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 Y_RNA.202-201ENST00000364083 110 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 SNORD31B-201ENST00000364977 69 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 RNU6-418P-201ENST00000384035 107 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 RNU6-1145P-201ENST00000384246 107 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
NDE1Q9NXR1 RNU4-53P-201ENST00000410828 140 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 EDDM3CP-201ENST00000415977 425 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 Z98742.3-201ENST00000418637 326 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 AC139712.2-201ENST00000424302 339 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 AL353689.1-201ENST00000438895 199 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.77□□□□□ -2.13
NDE1Q9NXR1 UQCRBP2-201ENST00000447827 297 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 AL137159.1-201ENST00000452808 512 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 RPL23AP3-201ENST00000453844 468 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 AC107393.1-201ENST00000512403 346 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 RNU6-107P-201ENST00000516643 102 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 AC040926.1-201ENST00000530195 238 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.77□□□□□ -2.13
NDE1Q9NXR1 MIR4419B-201ENST00000577260 68 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 MIR4680-201ENST00000580906 66 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 MIR4753-201ENST00000585119 83 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 AL031274.2-201ENST00000599419 203 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 SNRPGP19-201ENST00000603826 189 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.77□□□□□ -2.13
NDE1Q9NXR1 AC007742.2-201ENST00000618226 398 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 AC068205.3-201ENST00000636385 468 ntBASIC1.77□□□□□ -2.13
NDE1Q9NXR1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
NDE1Q9NXR1 MIR340-201ENST00000362125 95 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 SNORA63-201ENST00000363450 132 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 RNA5SP363-201ENST00000365072 115 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.76□□□□□ -2.13
NDE1Q9NXR1 SNORD14D-201ENST00000384390 87 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 RNY3P4-201ENST00000384428 101 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 Y_RNA.595-201ENST00000410403 105 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 AC113618.1-201ENST00000416747 285 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 AL445685.2-201ENST00000422551 342 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 AC007395.1-201ENST00000451333 677 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 AC016925.1-201ENST00000458303 298 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 AC010531.2-201ENST00000465012 153 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 RPS29P21-201ENST00000496272 170 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 SNORA40.9-201ENST00000515895 93 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms