Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 RPL21P1-201ENST00000399532 476 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 RNU4-62P-201ENST00000410125 130 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 EBAG9P1-201ENST00000418955 543 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 AC010154.1-201ENST00000425857 269 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 MTND3P23-201ENST00000431980 347 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 AL135790.2-201ENST00000437701 267 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 RPS27P1-201ENST00000450552 247 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.05□□□□□ -2.24
HMG20AQ9NP66 snoU13.27-201ENST00000459278 104 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 RNU6-329P-201ENST00000459618 107 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 RPS26P55-201ENST00000471178 356 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 MTND5P5-201ENST00000503764 376 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 AC015712.3-201ENST00000559380 164 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 MIR5695-201ENST00000579717 85 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 MIR4298-201ENST00000584380 73 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 AC093913.1-201ENST00000614178 329 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 AL359697.1-201ENST00000624879 587 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.04□□□□□ -2.24
HMG20AQ9NP66 RNU6-1240P-201ENST00000365155 104 ntBASIC1.04□□□□□ -2.24
HMG20AQ9NP66 MIR194-1-201ENST00000384892 85 ntBASIC1.04□□□□□ -2.24
HMG20AQ9NP66 AL356776.1-201ENST00000406574 447 ntBASIC1.04□□□□□ -2.24
HMG20AQ9NP66 MIR1185-2-201ENST00000408687 86 ntBASIC1.04□□□□□ -2.24
HMG20AQ9NP66 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.04□□□□□ -2.24
HMG20AQ9NP66 RPS27P16-201ENST00000425758 201 ntBASIC1.04□□□□□ -2.24
HMG20AQ9NP66 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
HMG20AQ9NP66 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.04□□□□□ -2.24
HMG20AQ9NP66 HMGN1P12-201ENST00000499125 195 ntBASIC1.04□□□□□ -2.24
HMG20AQ9NP66 AC108210.2-201ENST00000503681 201 ntBASIC1.04□□□□□ -2.24
HMG20AQ9NP66 RNA5SP481-201ENST00000516814 122 ntBASIC1.04□□□□□ -2.24
HMG20AQ9NP66 RNU1-54P-201ENST00000517181 120 ntBASIC1.04□□□□□ -2.24
HMG20AQ9NP66 AC091144.1-201ENST00000519573 138 ntBASIC1.04□□□□□ -2.24
HMG20AQ9NP66 AC027419.1-201ENST00000522976 328 ntBASIC1.04□□□□□ -2.24
HMG20AQ9NP66 AL590705.4-201ENST00000532209 134 ntBASIC1.04□□□□□ -2.24
HMG20AQ9NP66 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.04□□□□□ -2.24
HMG20AQ9NP66 AL442163.3-201ENST00000554110 156 ntBASIC1.04□□□□□ -2.24
HMG20AQ9NP66 AC015688.6-201ENST00000577737 104 ntBASIC1.04□□□□□ -2.24
HMG20AQ9NP66 AC018638.8-201ENST00000588755 281 ntBASIC1.04□□□□□ -2.24
HMG20AQ9NP66 AL929325.1-201ENST00000603096 117 ntBASIC1.04□□□□□ -2.24
HMG20AQ9NP66 AC022217.4-201ENST00000604389 163 ntBASIC1.04□□□□□ -2.24
HMG20AQ9NP66 AC002553.4-201ENST00000616896 331 ntBASIC1.04□□□□□ -2.24
HMG20AQ9NP66 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.04□□□□□ -2.24
HMG20AQ9NP66 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
HMG20AQ9NP66 ZNF299P-201ENST00000406845 1804 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
HMG20AQ9NP66 Y_RNA.106-201ENST00000363189 100 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 RNU6-596P-201ENST00000365395 98 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 RNU6-1013P-201ENST00000384180 107 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 RNU6-793P-201ENST00000384233 104 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 MIR513A1-201ENST00000385138 129 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 RNA5SP323-201ENST00000391094 133 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 MRPL35P1-201ENST00000404272 572 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 MIR548F5-201ENST00000408421 86 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 MIR1277-201ENST00000408536 78 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 RNA5SP118-201ENST00000410385 109 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 RNU6-1186P-201ENST00000410429 97 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 MTND1P4-201ENST00000435196 415 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 AC074290.1-201ENST00000448883 135 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.03□□□□□ -2.24
HMG20AQ9NP66 SNORD5.1-201ENST00000458800 75 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 RNU7-34P-201ENST00000459394 64 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 AC026782.1-201ENST00000512952 449 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 RNU7-175P-201ENST00000515915 61 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 SNORA31.10-201ENST00000516482 106 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 RNU7-128P-201ENST00000517247 62 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.03□□□□□ -2.24
HMG20AQ9NP66 MIR4422-201ENST00000581938 83 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.03□□□□□ -2.24
HMG20AQ9NP66 AC005014.2-201ENST00000607795 599 ntBASIC1.03□□□□□ -2.24
HMG20AQ9NP66 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.03□□□□□ -2.24
HMG20AQ9NP66 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
HMG20AQ9NP66 Y_RNA.6-201ENST00000362350 114 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 RNU6-874P-201ENST00000362390 105 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 U3.8-201ENST00000363675 217 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 SNORA7.1-201ENST00000363750 139 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 Y_RNA.179-201ENST00000363844 90 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 RNU6-281P-201ENST00000384212 103 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 SNORA12.1-201ENST00000390873 148 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
HMG20AQ9NP66 COX6CP10-201ENST00000416832 224 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 AC009474.2-201ENST00000451383 136 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.02□□□□□ -2.25
HMG20AQ9NP66 AC112492.4-201ENST00000456549 352 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 RNU7-95P-201ENST00000459222 64 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.02□□□□□ -2.25
HMG20AQ9NP66 Y_RNA.670-201ENST00000516255 105 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 RNU6-1146P-201ENST00000516282 102 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 RNU6-1198P-201ENST00000516904 67 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 AC134698.4-201ENST00000523451 826 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.02□□□□□ -2.25
HMG20AQ9NP66 MIR4709-201ENST00000577272 72 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.02□□□□□ -2.25
HMG20AQ9NP66 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.02□□□□□ -2.25
HMG20AQ9NP66 MIR4295-201ENST00000585286 85 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 AC073413.2-201ENST00000604332 360 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 MIR6715A-201ENST00000615929 79 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 AL353997.5-201ENST00000618886 171 ntBASIC1.02□□□□□ -2.25
HMG20AQ9NP66 AC027514.1-201ENST00000588561 1603 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms