Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 RPL23AP50-201ENST00000434149 455 ntBASIC1.72□□□□□ -2.13
SNX25Q9H3E2 AC074290.1-201ENST00000448883 135 ntBASIC1.72□□□□□ -2.13
SNX25Q9H3E2 USP9YP23-201ENST00000455085 407 ntBASIC1.72□□□□□ -2.13
SNX25Q9H3E2 U8.22-201ENST00000459141 133 ntBASIC1.72□□□□□ -2.13
SNX25Q9H3E2 AC091951.2-201ENST00000500762 203 ntBASIC1.72□□□□□ -2.13
SNX25Q9H3E2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.72□□□□□ -2.13
SNX25Q9H3E2 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.72□□□□□ -2.13
SNX25Q9H3E2 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.72□□□□□ -2.13
SNX25Q9H3E2 RNU6-277P-201ENST00000516272 106 ntBASIC1.72□□□□□ -2.13
SNX25Q9H3E2 SNORA31.17-201ENST00000516953 127 ntBASIC1.72□□□□□ -2.13
SNX25Q9H3E2 CBX3P4-201ENST00000538909 354 ntBASIC1.72□□□□□ -2.13
SNX25Q9H3E2 AC125232.2-201ENST00000592457 143 ntBASIC1.72□□□□□ -2.13
SNX25Q9H3E2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.72□□□□□ -2.13
SNX25Q9H3E2 AC010999.1-201ENST00000611856 324 ntBASIC1.72□□□□□ -2.13
SNX25Q9H3E2 AC092794.2-201ENST00000620933 563 ntBASIC1.72□□□□□ -2.13
SNX25Q9H3E2 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.72□□□□□ -2.13
SNX25Q9H3E2 RNU1-96P-201ENST00000364163 162 ntBASIC1.71□□□□□ -2.14
SNX25Q9H3E2 Y_RNA.557-201ENST00000384680 107 ntBASIC1.71□□□□□ -2.14
SNX25Q9H3E2 MIR329-1-201ENST00000385028 80 ntBASIC1.71□□□□□ -2.14
SNX25Q9H3E2 MIR1185-2-201ENST00000408687 86 ntBASIC1.71□□□□□ -2.14
SNX25Q9H3E2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.71□□□□□ -2.14
SNX25Q9H3E2 HMGN2P34-201ENST00000437647 269 ntBASIC1.71□□□□□ -2.14
SNX25Q9H3E2 RNU7-87P-201ENST00000459343 62 ntBASIC1.71□□□□□ -2.14
SNX25Q9H3E2 RPL17P19-201ENST00000489069 552 ntBASIC1.71□□□□□ -2.14
SNX25Q9H3E2 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.71□□□□□ -2.14
SNX25Q9H3E2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.71□□□□□ -2.14
SNX25Q9H3E2 AC090617.3-201ENST00000573670 475 ntBASIC1.71□□□□□ -2.14
SNX25Q9H3E2 SNORD53B-201ENST00000577887 78 ntBASIC1.71□□□□□ -2.14
SNX25Q9H3E2 AC113139.1-201ENST00000605049 239 ntBASIC1.71□□□□□ -2.14
SNX25Q9H3E2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SNX25Q9H3E2 MTND5P35-201ENST00000557537 1720 ntBASIC1.71□□□□□ -2.14
SNX25Q9H3E2 RNU5F-3P-201ENST00000363767 117 ntBASIC1.7□□□□□ -2.14
SNX25Q9H3E2 Y_RNA.287-201ENST00000364853 94 ntBASIC1.7□□□□□ -2.14
SNX25Q9H3E2 RNA5SP363-201ENST00000365072 115 ntBASIC1.7□□□□□ -2.14
SNX25Q9H3E2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SNX25Q9H3E2 MTND4P18-201ENST00000447010 465 ntBASIC1.7□□□□□ -2.14
SNX25Q9H3E2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.7□□□□□ -2.14
SNX25Q9H3E2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.7□□□□□ -2.14
SNX25Q9H3E2 GNAI2P1-201ENST00000541815 315 ntBASIC1.7□□□□□ -2.14
SNX25Q9H3E2 AC084364.2-201ENST00000546924 395 ntBASIC1.7□□□□□ -2.14
SNX25Q9H3E2 AC093023.1-201ENST00000547375 507 ntBASIC1.7□□□□□ -2.14
SNX25Q9H3E2 snoU2-30.2-201ENST00000362805 70 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 SNORA33-201ENST00000363664 130 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 RNU6-1019P-201ENST00000364424 107 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 RNU6-99P-201ENST00000364721 107 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 RNU4-42P-201ENST00000364738 142 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 RNU6-1145P-201ENST00000384246 107 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 SNORA67.5-201ENST00000391036 107 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 SNORA75.6-201ENST00000391318 127 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 RNU6-1001P-201ENST00000411265 100 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 AC007098.1-201ENST00000420122 367 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 CST2P1-201ENST00000425770 87 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 AC092423.1-201ENST00000430165 186 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.69□□□□□ -2.14
SNX25Q9H3E2 MTCO3P10-201ENST00000455912 772 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 RNU6-237P-201ENST00000515985 71 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 RNU6-875P-201ENST00000516488 106 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 AC091144.1-201ENST00000519573 138 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 AC004584.2-201ENST00000570407 410 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.69□□□□□ -2.14
SNX25Q9H3E2 MIR5690-201ENST00000583739 73 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 AC069114.2-201ENST00000604699 304 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 AL132765.2-201ENST00000610812 351 ntBASIC1.69□□□□□ -2.14
SNX25Q9H3E2 AC010615.1-201ENST00000594254 1764 ntBASIC1.68□□□□□ -2.14
SNX25Q9H3E2 RNY3P14-201ENST00000384309 102 ntBASIC1.68□□□□□ -2.14
SNX25Q9H3E2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.68□□□□□ -2.14
SNX25Q9H3E2 RNU6-559P-201ENST00000516151 98 ntBASIC1.68□□□□□ -2.14
SNX25Q9H3E2 Y_RNA.683-201ENST00000516508 93 ntBASIC1.68□□□□□ -2.14
SNX25Q9H3E2 RNU6-307P-201ENST00000516743 106 ntBASIC1.68□□□□□ -2.14
SNX25Q9H3E2 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.68□□□□□ -2.14
SNX25Q9H3E2 SUB1P3-201ENST00000564581 315 ntBASIC1.68□□□□□ -2.14
SNX25Q9H3E2 FRG2DP-202ENST00000566967 323 ntBASIC1.68□□□□□ -2.14
SNX25Q9H3E2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SNX25Q9H3E2 BX248123.2-201ENST00000606318 124 ntBASIC1.68□□□□□ -2.14
SNX25Q9H3E2 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.68□□□□□ -2.14
SNX25Q9H3E2 MIR1244-1-201ENST00000612829 85 ntBASIC1.68□□□□□ -2.14
SNX25Q9H3E2 AL357075.2-201ENST00000614906 189 ntBASIC1.68□□□□□ -2.14
SNX25Q9H3E2 MIR1244-3-201ENST00000635744 85 ntBASIC1.68□□□□□ -2.14
SNX25Q9H3E2 MIR1244-2-201ENST00000636449 85 ntBASIC1.68□□□□□ -2.14
SNX25Q9H3E2 MIR1244-4-202ENST00000636813 85 ntBASIC1.68□□□□□ -2.14
SNX25Q9H3E2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.68□□□□□ -2.14
SNX25Q9H3E2 RNA5SP361-201ENST00000362686 118 ntBASIC1.67□□□□□ -2.14
SNX25Q9H3E2 Y_RNA.140-201ENST00000363474 103 ntBASIC1.67□□□□□ -2.14
SNX25Q9H3E2 RNU6-457P-201ENST00000363999 107 ntBASIC1.67□□□□□ -2.14
SNX25Q9H3E2 SNORA63D-201ENST00000364359 132 ntBASIC1.67□□□□□ -2.14
SNX25Q9H3E2 Y_RNA.358-201ENST00000365491 99 ntBASIC1.67□□□□□ -2.14
SNX25Q9H3E2 RNU6-890P-201ENST00000384121 107 ntBASIC1.67□□□□□ -2.14
SNX25Q9H3E2 RNU6-439P-201ENST00000384188 106 ntBASIC1.67□□□□□ -2.14
SNX25Q9H3E2 SNORD116-29-201ENST00000384516 83 ntBASIC1.67□□□□□ -2.14
SNX25Q9H3E2 RNU6-417P-201ENST00000384712 107 ntBASIC1.67□□□□□ -2.14
SNX25Q9H3E2 RNU6-997P-201ENST00000384725 107 ntBASIC1.67□□□□□ -2.14
SNX25Q9H3E2 ELOCP21-201ENST00000412558 336 ntBASIC1.67□□□□□ -2.14
SNX25Q9H3E2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.67□□□□□ -2.14
SNX25Q9H3E2 HSPE1P21-201ENST00000438283 308 ntBASIC1.67□□□□□ -2.14
SNX25Q9H3E2 FGF7P4-201ENST00000509595 295 ntBASIC1.67□□□□□ -2.14
SNX25Q9H3E2 RNA5SP437-201ENST00000517249 129 ntBASIC1.67□□□□□ -2.14
SNX25Q9H3E2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.67□□□□□ -2.14
SNX25Q9H3E2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.67□□□□□ -2.14
SNX25Q9H3E2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.67□□□□□ -2.14
SNX25Q9H3E2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 231.2 ms