Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 MTND1P15-201ENST00000579262 949 ntBASIC0.35□□□□□ -2.35
VCX3BQ9H321 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.35□□□□□ -2.35
VCX3BQ9H321 AL117336.2-201ENST00000602435 335 ntBASIC0.35□□□□□ -2.35
VCX3BQ9H321 MIR6516-201ENST00000630554 81 ntBASIC0.35□□□□□ -2.35
VCX3BQ9H321 AC134026.1-201ENST00000623249 2239 ntBASIC0.35□□□□□ -2.35
VCX3BQ9H321 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
VCX3BQ9H321 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.35
VCX3BQ9H321 MIR373-201ENST00000362273 69 ntBASIC0.34□□□□□ -2.36
VCX3BQ9H321 Y_RNA.265-201ENST00000364677 108 ntBASIC0.34□□□□□ -2.36
VCX3BQ9H321 Y_RNA.415-201ENST00000384012 112 ntBASIC0.34□□□□□ -2.36
VCX3BQ9H321 RNU6-17P-201ENST00000384245 107 ntBASIC0.34□□□□□ -2.36
VCX3BQ9H321 RNU6-18P-201ENST00000384527 107 ntBASIC0.34□□□□□ -2.36
VCX3BQ9H321 RNU6-1158P-201ENST00000391167 107 ntBASIC0.34□□□□□ -2.36
VCX3BQ9H321 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.34□□□□□ -2.36
VCX3BQ9H321 LINC01399-202ENST00000458450 244 ntBASIC0.34□□□□□ -2.36
VCX3BQ9H321 MTCO1P29-201ENST00000496868 288 ntBASIC0.34□□□□□ -2.36
VCX3BQ9H321 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.34□□□□□ -2.36
VCX3BQ9H321 AC091133.4-201ENST00000511142 308 ntBASIC0.34□□□□□ -2.36
VCX3BQ9H321 AC022868.1-201ENST00000517767 391 ntBASIC0.34□□□□□ -2.36
VCX3BQ9H321 AC027419.1-201ENST00000522976 328 ntBASIC0.34□□□□□ -2.36
VCX3BQ9H321 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.34□□□□□ -2.36
VCX3BQ9H321 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.34□□□□□ -2.36
VCX3BQ9H321 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.34□□□□□ -2.36
VCX3BQ9H321 AC087683.1-201ENST00000591187 441 ntBASIC0.34□□□□□ -2.36
VCX3BQ9H321 AC017083.3-201ENST00000609955 700 ntBASIC0.34□□□□□ -2.36
VCX3BQ9H321 AL121757.2-201ENST00000611223 313 ntBASIC0.34□□□□□ -2.36
VCX3BQ9H321 MIR6079-201ENST00000635807 62 ntBASIC0.34□□□□□ -2.36
VCX3BQ9H321 MTND4P12-201ENST00000498999 1377 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 RNU5A-6P-201ENST00000384136 116 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 RNU6-933P-201ENST00000384424 107 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 RNY3P9-201ENST00000384727 106 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 MRPS10P2-201ENST00000431226 381 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 MTCO2P16-201ENST00000436962 677 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 AC079354.2-201ENST00000453523 154 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.33□□□□□ -2.36
VCX3BQ9H321 AC113410.1-201ENST00000505029 247 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 AC092436.3-201ENST00000511788 257 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.33□□□□□ -2.36
VCX3BQ9H321 AC097462.1-201ENST00000514125 324 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 SNORA25.14-201ENST00000516481 132 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 RNU6-58P-201ENST00000517143 103 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 DEFB108E-201ENST00000524692 240 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 AC023157.2-201ENST00000540596 141 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 MIR3192-201ENST00000584920 77 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 Z94722.1-201ENST00000604328 474 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 AC012557.2-201ENST00000605919 418 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 snoU13.31-201ENST00000607291 104 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 AL354950.2-201ENST00000617939 290 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 AC006435.5-201ENST00000624486 112 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.33□□□□□ -2.36
VCX3BQ9H321 ELL2P3-201ENST00000457883 1602 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 AC005592.1-201ENST00000566527 1640 ntBASIC0.33□□□□□ -2.36
VCX3BQ9H321 MIRLET7C-201ENST00000362160 84 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 SNORD50.1-201ENST00000362987 71 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 RNU6-727P-201ENST00000363592 107 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 RNU6-873P-201ENST00000363833 107 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 SNORD115-32-201ENST00000364079 82 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 Y_RNA.319-201ENST00000365138 92 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 Y_RNA.378-201ENST00000365652 113 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 SNORA50A-201ENST00000384225 134 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 MIR526A1-201ENST00000384897 85 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 SNORD99-201ENST00000408612 74 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 AL353193.1-201ENST00000421444 268 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 MTCO2P19-201ENST00000427513 598 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 Z82188.1-201ENST00000436709 154 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 AC091179.3-201ENST00000474761 144 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.32□□□□□ -2.36
VCX3BQ9H321 RNU7-28P-201ENST00000516759 62 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 RNU2-56P-201ENST00000516826 190 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 AC016957.1-201ENST00000534895 309 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 AC027288.2-201ENST00000553028 243 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 AC040904.1-201ENST00000590850 223 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 AL133215.3-201ENST00000609801 448 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 FAM157A-202ENST00000615155 405 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.32□□□□□ -2.36
VCX3BQ9H321 RNU4-20P-201ENST00000365601 151 ntBASIC0.31□□□□□ -2.36
VCX3BQ9H321 RNU6-214P-201ENST00000384130 107 ntBASIC0.31□□□□□ -2.36
VCX3BQ9H321 RNU6-1103P-201ENST00000384150 107 ntBASIC0.31□□□□□ -2.36
VCX3BQ9H321 MIR32-201ENST00000384965 70 ntBASIC0.31□□□□□ -2.36
VCX3BQ9H321 MIR23A-201ENST00000385245 73 ntBASIC0.31□□□□□ -2.36
VCX3BQ9H321 AC073464.1-201ENST00000429823 534 ntBASIC0.31□□□□□ -2.36
VCX3BQ9H321 AC092423.1-201ENST00000430165 186 ntBASIC0.31□□□□□ -2.36
VCX3BQ9H321 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.31□□□□□ -2.36
VCX3BQ9H321 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.31□□□□□ -2.36
VCX3BQ9H321 SNORD65B-201ENST00000459126 73 ntBASIC0.31□□□□□ -2.36
VCX3BQ9H321 Y_RNA.654-201ENST00000497848 106 ntBASIC0.31□□□□□ -2.36
VCX3BQ9H321 RNU4-57P-201ENST00000515980 135 ntBASIC0.31□□□□□ -2.36
VCX3BQ9H321 RNU7-12P-201ENST00000516030 62 ntBASIC0.31□□□□□ -2.36
VCX3BQ9H321 SNORA40.12-201ENST00000516329 111 ntBASIC0.31□□□□□ -2.36
VCX3BQ9H321 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
VCX3BQ9H321 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.31□□□□□ -2.36
VCX3BQ9H321 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.31□□□□□ -2.36
VCX3BQ9H321 AC100830.2-201ENST00000581636 240 ntBASIC0.31□□□□□ -2.36
VCX3BQ9H321 AL359821.1-201ENST00000605519 182 ntBASIC0.31□□□□□ -2.36
VCX3BQ9H321 SNORA1B-201ENST00000362535 133 ntBASIC0.3□□□□□ -2.36
VCX3BQ9H321 Y_RNA.167-201ENST00000363735 109 ntBASIC0.3□□□□□ -2.36
VCX3BQ9H321 RNU4-9P-201ENST00000364951 139 ntBASIC0.3□□□□□ -2.36
VCX3BQ9H321 SNORD37.1-201ENST00000390968 65 ntBASIC0.3□□□□□ -2.36
VCX3BQ9H321 MTCO1P20-201ENST00000425366 358 ntBASIC0.3□□□□□ -2.36
VCX3BQ9H321 MTND4P18-201ENST00000447010 465 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms