| KRTAP9-3 | Q9BYQ3 | RN7SKP132-201 | ENST00000516001 | 208 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | RNA5SP49-201 | ENST00000516450 | 115 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | RNU2-19P-201 | ENST00000517288 | 84 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | CTAGE5-210 | ENST00000553728 | 4392 nt | APPRIS ALT2 TSL 5 BASIC | 2.04 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | MIR3920-201 | ENST00000581751 | 86 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | MIR548AR-201 | ENST00000582191 | 57 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | SPRY4-IT1_2.1-201 | ENST00000612613 | 121 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | NF1-202 | ENST00000358273 | 12425 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.04 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | SYT14-206 | ENST00000537238 | 5208 nt | APPRIS ALT2 TSL 5 BASIC | 2.04 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | CNTN3-201 | ENST00000263665 | 4948 nt | APPRIS P1 TSL 1 (best) BASIC | 2.04 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | NBPF9-208 | ENST00000621074 | 4302 nt | TSL 5 BASIC | 2.04 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | TM4SF18-201 | ENST00000296059 | 3852 nt | APPRIS P1 TSL 1 (best) BASIC | 2.04 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | RAP1GDS1-205 | ENST00000408927 | 3681 nt | APPRIS P3 TSL 2 BASIC | 2.04 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | AC011124.2-201 | ENST00000518739 | 3222 nt | TSL 1 (best) BASIC | 2.04 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | PIK3C3-202 | ENST00000398870 | 9206 nt | TSL 2 BASIC | 2.04 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | CEP44-203 | ENST00000426172 | 3037 nt | TSL 5 BASIC | 2.04 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | DNAH17-201 | ENST00000389840 | 13723 nt | APPRIS P5 TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | AC131280.1-202 | ENST00000624067 | 4211 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | TRPM6-204 | ENST00000449912 | 8244 nt | APPRIS P1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | PUM2-202 | ENST00000338086 | 6112 nt | APPRIS P1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | ZC3H14-201 | ENST00000251038 | 18281 nt | APPRIS P3 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | FGF7-206 | ENST00000614567 | 3936 nt | APPRIS P1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | FNBP1L-203 | ENST00000370253 | 3889 nt | APPRIS ALT1 TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | ADGRF1-203 | ENST00000371253 | 5468 nt | APPRIS P1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | PLCH1-201 | ENST00000334686 | 6128 nt | APPRIS P3 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | ZNF33A-202 | ENST00000374618 | 6122 nt | TSL 4 BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | CHRM2-203 | ENST00000445907 | 5918 nt | APPRIS P1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | XPNPEP3-201 | ENST00000357137 | 7988 nt | APPRIS P1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | LMO3-201 | ENST00000261169 | 3810 nt | TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | RNU6-249P-201 | ENST00000363016 | 102 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | RNA5SP513-201 | ENST00000364648 | 118 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | SNORA62.3-201 | ENST00000365110 | 153 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | HMGN2P39-201 | ENST00000398005 | 273 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | MRPS21P3-201 | ENST00000436696 | 262 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | CYCSP35-201 | ENST00000451978 | 304 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | ITCH-AS1-201 | ENST00000454205 | 299 nt | TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | YPEL5P3-201 | ENST00000547227 | 352 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | MIR4286-201 | ENST00000580651 | 93 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | MIR3140-201 | ENST00000583685 | 90 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | UBL5P2-201 | ENST00000583788 | 219 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | MIR548AD-201 | ENST00000584780 | 82 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | U4.6-201 | ENST00000621618 | 127 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | AC140479.6-201 | ENST00000633535 | 357 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | U6.109-201 | ENST00000636749 | 87 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | RALGAPA1-202 | ENST00000382366 | 6328 nt | TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | LRMP-201 | ENST00000354454 | 2504 nt | APPRIS P2 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | OR4K13-202 | ENST00000641664 | 5980 nt | APPRIS P1 BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | ADGRL3-210 | ENST00000508946 | 4758 nt | APPRIS ALT2 TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | SV2B-202 | ENST00000394232 | 11279 nt | APPRIS P1 TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | AL589745.1-201 | ENST00000421190 | 3336 nt | TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | R3HCC1L-205 | ENST00000612478 | 3337 nt | TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | STEAP2-203 | ENST00000394622 | 6612 nt | APPRIS P1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | CNTNAP4-205 | ENST00000476707 | 4355 nt | TSL 2 BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | ZNF266-203 | ENST00000588933 | 3293 nt | APPRIS P1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | ZNF681-201 | ENST00000402377 | 6497 nt | APPRIS P1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | TMPRSS11A-201 | ENST00000334830 | 3054 nt | APPRIS P3 TSL 2 BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | MGAM2-201 | ENST00000477922 | 7867 nt | APPRIS P1 TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| KRTAP9-3 | Q9BYQ3 | EPS15-202 | ENST00000371730 | 4736 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | GTF2H5-201 | ENST00000607778 | 7481 nt | APPRIS P1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | PCNX4-201 | ENST00000317623 | 17339 nt | APPRIS P3 TSL 5 BASIC | 2.03 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | C1orf141-208 | ENST00000621590 | 4179 nt | APPRIS ALT2 TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | ATP13A4-203 | ENST00000392443 | 4016 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | CLMN-201 | ENST00000298912 | 12747 nt | APPRIS P1 TSL 1 (best) BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | OR52A5-201 | ENST00000307388 | 3973 nt | APPRIS P1 BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | AC023934.1-201 | ENST00000574529 | 2389 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | AC015813.1-203 | ENST00000585065 | 4722 nt | TSL 2 BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | RBM28-201 | ENST00000223073 | 15507 nt | APPRIS P1 TSL 1 (best) BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | WDR72-204 | ENST00000559418 | 3602 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | CACNB4-229 | ENST00000636617 | 5757 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | PEX2-201 | ENST00000357039 | 4317 nt | APPRIS P1 TSL 1 (best) BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | MIR99AHG-219 | ENST00000619222 | 3476 nt | TSL 2 BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | SMAD5-212 | ENST00000545620 | 6937 nt | APPRIS P1 TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | PTRH2-203 | ENST00000470557 | 4114 nt | APPRIS P3 BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | VEZT-201 | ENST00000261219 | 3435 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | LINC00624-202 | ENST00000621316 | 3372 nt | TSL 1 (best) BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | MCF2-208 | ENST00000519895 | 3346 nt | APPRIS ALT2 TSL 2 BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | MLH3-201 | ENST00000355774 | 7896 nt | APPRIS P1 TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | SSH1-202 | ENST00000326495 | 13040 nt | APPRIS P3 TSL 1 (best) BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | EIF4E-203 | ENST00000450253 | 11523 nt | APPRIS P1 TSL 1 (best) BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | RNU6-862P-201 | ENST00000362804 | 105 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | RNA5SP130-201 | ENST00000364431 | 114 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | Y_RNA.333-201 | ENST00000365274 | 102 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | RNU6-949P-201 | ENST00000384040 | 107 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | RNA5SP299-201 | ENST00000391203 | 116 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | AC019129.1-201 | ENST00000403786 | 261 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | AC004875.1-201 | ENST00000432702 | 378 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | AC020594.1-201 | ENST00000437680 | 338 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | AL606517.2-201 | ENST00000442855 | 241 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | AL162151.2-201 | ENST00000448875 | 158 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | PRSS3P4-201 | ENST00000453323 | 162 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | RPL32P34-201 | ENST00000486380 | 400 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | RNA5SP116-201 | ENST00000516132 | 98 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | AP000867.2-201 | ENST00000532468 | 320 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | AC136475.4-201 | ENST00000534271 | 280 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | AC121758.2-201 | ENST00000553271 | 193 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | RNU6-92P-201 | ENST00000605893 | 104 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | AL662814.1-201 | ENST00000617364 | 121 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | MIR6875-201 | ENST00000617506 | 72 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | PDE1C-203 | ENST00000396184 | 8852 nt | TSL 1 (best) BASIC | 2.02 | □□□□□ -2.09 | | |
| KRTAP9-3 | Q9BYQ3 | NADK2-203 | ENST00000397338 | 3614 nt | TSL 2 BASIC | 2.02 | □□□□□ -2.09 | | |