Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAIPQ9BWF2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.55□□□□□ -1.84
TRAIPQ9BWF2 RNU6-1278P-201ENST00000516130 107 ntBASIC3.55□□□□□ -1.84
TRAIPQ9BWF2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAIPQ9BWF2 AC010900.2-201ENST00000604508 210 ntBASIC3.55□□□□□ -1.84
TRAIPQ9BWF2 AC090425.1-201ENST00000610007 140 ntBASIC3.55□□□□□ -1.84
TRAIPQ9BWF2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAIPQ9BWF2 AL035425.3-201ENST00000564206 4996 ntBASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 RNU1-58P-201ENST00000362413 163 ntBASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 RNU6-740P-201ENST00000364734 105 ntBASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 Y_RNA.361-201ENST00000365515 120 ntBASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 Y_RNA.456-201ENST00000384232 111 ntBASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 SNORA7.4-201ENST00000384249 137 ntBASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 RNU6-662P-201ENST00000384253 104 ntBASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 RNU6-417P-201ENST00000384712 107 ntBASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 MIR181A2-201ENST00000384863 110 ntBASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 RNA5SP323-201ENST00000391094 133 ntBASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 RPS15AP28-201ENST00000435088 386 ntBASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 CR769767.1-201ENST00000436337 346 ntBASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 MIR2682-201ENST00000580305 110 ntBASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 uc_338.1-201ENST00000612113 180 ntBASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
TRAIPQ9BWF2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
TRAIPQ9BWF2 RNA5SP383-201ENST00000362934 120 ntBASIC3.53□□□□□ -1.84
TRAIPQ9BWF2 RNU6-1289P-201ENST00000384431 106 ntBASIC3.53□□□□□ -1.84
TRAIPQ9BWF2 MIR515-2-201ENST00000384883 83 ntBASIC3.53□□□□□ -1.84
TRAIPQ9BWF2 MIR515-1-201ENST00000384884 83 ntBASIC3.53□□□□□ -1.84
TRAIPQ9BWF2 OOSP1P1-201ENST00000423265 274 ntBASIC3.53□□□□□ -1.84
TRAIPQ9BWF2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.53□□□□□ -1.84
TRAIPQ9BWF2 RNA5SP385-201ENST00000515947 110 ntBASIC3.53□□□□□ -1.84
TRAIPQ9BWF2 RNU4-71P-201ENST00000516258 113 ntBASIC3.53□□□□□ -1.84
TRAIPQ9BWF2 Y_RNA.680-201ENST00000516441 93 ntBASIC3.53□□□□□ -1.84
TRAIPQ9BWF2 AC104027.1-201ENST00000521887 300 ntBASIC3.53□□□□□ -1.84
TRAIPQ9BWF2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.53□□□□□ -1.84
TRAIPQ9BWF2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.53□□□□□ -1.84
TRAIPQ9BWF2 AC007229.1-201ENST00000590455 412 ntBASIC3.53□□□□□ -1.84
TRAIPQ9BWF2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 Y_RNA.124-201ENST00000363339 93 ntBASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 RNU4-13P-201ENST00000364019 141 ntBASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 RNU6-1164P-201ENST00000364428 107 ntBASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 MIR634-201ENST00000385208 97 ntBASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 RNU11-3P-201ENST00000391111 133 ntBASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 RNA5SP293-201ENST00000410527 113 ntBASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 HSPE1P21-201ENST00000438283 308 ntBASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 RN7SL863P-201ENST00000462370 296 ntBASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 YWHAEP4-201ENST00000505390 198 ntBASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 SNORA64.4-201ENST00000516632 81 ntBASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 RNU7-172P-201ENST00000517125 64 ntBASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 AC136628.3-201ENST00000521868 290 ntBASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 AC141273.2-201ENST00000618989 130 ntBASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 AC073476.4-201ENST00000628409 72 ntBASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 MIR622-201ENST00000638396 96 ntBASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.52□□□□□ -1.85
TRAIPQ9BWF2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.51□□□□□ -1.85
TRAIPQ9BWF2 Y_RNA.287-201ENST00000364853 94 ntBASIC3.51□□□□□ -1.85
TRAIPQ9BWF2 Y_RNA.368-201ENST00000365547 113 ntBASIC3.51□□□□□ -1.85
TRAIPQ9BWF2 RNU6-376P-201ENST00000384731 106 ntBASIC3.51□□□□□ -1.85
TRAIPQ9BWF2 MIR518C-201ENST00000384822 101 ntBASIC3.51□□□□□ -1.85
TRAIPQ9BWF2 RNU6-1186P-201ENST00000410429 97 ntBASIC3.51□□□□□ -1.85
TRAIPQ9BWF2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.51□□□□□ -1.85
TRAIPQ9BWF2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.51□□□□□ -1.85
TRAIPQ9BWF2 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.51□□□□□ -1.85
TRAIPQ9BWF2 AL049873.1-201ENST00000480540 376 ntBASIC3.51□□□□□ -1.85
TRAIPQ9BWF2 MTND1P19-201ENST00000511780 315 ntBASIC3.51□□□□□ -1.85
TRAIPQ9BWF2 RNU6-1337P-201ENST00000516525 95 ntBASIC3.51□□□□□ -1.85
TRAIPQ9BWF2 SCARNA13-201ENST00000516672 275 ntBASIC3.51□□□□□ -1.85
TRAIPQ9BWF2 RNU1-142P-201ENST00000516682 145 ntBASIC3.51□□□□□ -1.85
TRAIPQ9BWF2 AP005660.1-201ENST00000522972 293 ntBASIC3.51□□□□□ -1.85
TRAIPQ9BWF2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRAIPQ9BWF2 AL359075.3-201ENST00000613288 217 ntBASIC3.51□□□□□ -1.85
TRAIPQ9BWF2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRAIPQ9BWF2 Y_RNA.111-201ENST00000363248 100 ntBASIC3.5□□□□□ -1.85
TRAIPQ9BWF2 RNU6-1318P-201ENST00000365389 103 ntBASIC3.5□□□□□ -1.85
TRAIPQ9BWF2 SUMO1P4-201ENST00000429430 302 ntBASIC3.5□□□□□ -1.85
TRAIPQ9BWF2 AC018634.1-201ENST00000437554 401 ntBASIC3.5□□□□□ -1.85
TRAIPQ9BWF2 RNU6-111P-201ENST00000517179 105 ntBASIC3.5□□□□□ -1.85
TRAIPQ9BWF2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.5□□□□□ -1.85
TRAIPQ9BWF2 MIR4506-201ENST00000584693 77 ntBASIC3.5□□□□□ -1.85
TRAIPQ9BWF2 AC005786.1-201ENST00000588553 154 ntBASIC3.5□□□□□ -1.85
TRAIPQ9BWF2 AL353149.1-201ENST00000610667 244 ntBASIC3.5□□□□□ -1.85
TRAIPQ9BWF2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRAIPQ9BWF2 MIR422A-201ENST00000362286 90 ntBASIC3.49□□□□□ -1.85
TRAIPQ9BWF2 SNORD56.3-201ENST00000363507 71 ntBASIC3.49□□□□□ -1.85
TRAIPQ9BWF2 Y_RNA.257-201ENST00000364596 102 ntBASIC3.49□□□□□ -1.85
TRAIPQ9BWF2 U8.9-201ENST00000365667 134 ntBASIC3.49□□□□□ -1.85
TRAIPQ9BWF2 RNU6-338P-201ENST00000383888 105 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms