Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.4□□□□□ -2.19
CHRDL1Q9BU40 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.4□□□□□ -2.19
CHRDL1Q9BU40 snoU13.30-201ENST00000458951 104 ntBASIC1.4□□□□□ -2.19
CHRDL1Q9BU40 RPS29P11-201ENST00000496507 171 ntBASIC1.4□□□□□ -2.19
CHRDL1Q9BU40 RPL23AP63-201ENST00000498752 471 ntBASIC1.4□□□□□ -2.19
CHRDL1Q9BU40 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.4□□□□□ -2.19
CHRDL1Q9BU40 Y_RNA.708-201ENST00000516950 96 ntBASIC1.4□□□□□ -2.19
CHRDL1Q9BU40 APOOP3-201ENST00000536787 586 ntBASIC1.4□□□□□ -2.19
CHRDL1Q9BU40 MIR5696-201ENST00000578474 85 ntBASIC1.4□□□□□ -2.19
CHRDL1Q9BU40 MIR4524B-201ENST00000581569 115 ntBASIC1.4□□□□□ -2.19
CHRDL1Q9BU40 MIR3171-201ENST00000584270 74 ntBASIC1.4□□□□□ -2.19
CHRDL1Q9BU40 MIR1302-2-201ENST00000607096 138 ntBASIC1.4□□□□□ -2.19
CHRDL1Q9BU40 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.4□□□□□ -2.19
CHRDL1Q9BU40 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CHRDL1Q9BU40 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CHRDL1Q9BU40 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.19
CHRDL1Q9BU40 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CHRDL1Q9BU40 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 MIR369-201ENST00000362155 70 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 RNU6-222P-201ENST00000362438 107 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 Y_RNA.162-201ENST00000363683 102 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 RNA5SP363-201ENST00000365072 115 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 Y_RNA.319-201ENST00000365138 92 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 Y_RNA.387-201ENST00000383918 102 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 Y_RNA.395-201ENST00000383945 109 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 Y_RNA.482-201ENST00000384377 111 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 RNU6-541P-201ENST00000384709 110 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 MIR520A-201ENST00000384862 85 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 MTND2P23-201ENST00000422990 651 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 PMCHL1-202ENST00000423102 261 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 FTH1P12-201ENST00000432137 551 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 RPL23AP50-201ENST00000434149 455 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 HSPE1P24-201ENST00000450782 238 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 Y_RNA.635-201ENST00000459041 101 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 RPL36AP21-201ENST00000490372 323 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 RNU6-120P-201ENST00000516077 103 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 SCARNA16.2-201ENST00000516520 172 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 RNU6-295P-201ENST00000516901 104 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 RNU1-117P-201ENST00000517041 158 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 AL590705.4-201ENST00000532209 134 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 AC069114.2-201ENST00000604699 304 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 AL360085.1-201ENST00000604713 532 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 AP001485.1-201ENST00000604799 199 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 AC005014.2-201ENST00000607795 599 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 PART1_1.1-201ENST00000611761 217 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 PISRT1.1-201ENST00000616930 107 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 AL669831.3-213ENST00000636676 183 ntBASIC1.39□□□□□ -2.19
CHRDL1Q9BU40 AP000648.3-201ENST00000623539 4507 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 RNU6-727P-201ENST00000363592 107 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 RNU6-873P-201ENST00000363833 107 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 RNU6-595P-201ENST00000363944 107 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 RNU6-593P-201ENST00000364716 112 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 RNU6-596P-201ENST00000365395 98 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 MIR9-3-201ENST00000385084 90 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 MIR153-2-201ENST00000385225 87 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 AL590004.1-201ENST00000405321 300 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 AC245517.4-201ENST00000448601 281 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 AC007395.1-201ENST00000451333 677 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 MTCO3P10-201ENST00000455912 772 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 AC016925.1-201ENST00000458303 298 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 AC108210.2-201ENST00000503681 201 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 RNU6-559P-201ENST00000516151 98 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 Y_RNA.711-201ENST00000516993 102 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 RNU6-1137P-201ENST00000517073 99 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 AC027288.2-201ENST00000553028 243 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 AC026470.2-201ENST00000561492 181 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 7SK.7-201ENST00000603504 247 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 AL080274.1-201ENST00000605565 220 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 AL355802.3-201ENST00000607571 545 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 AC083806.3-201ENST00000614016 455 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 TCL6_2.1-201ENST00000615162 119 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 uc_338.22-201ENST00000622722 187 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 AC134503.1-201ENST00000633048 54 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 AC068205.3-201ENST00000636385 468 ntBASIC1.38□□□□□ -2.19
CHRDL1Q9BU40 AL159152.1-201ENST00000635019 2587 ntBASIC1.37□□□□□ -2.19
CHRDL1Q9BU40 AL161722.3-201ENST00000605789 2983 ntBASIC1.37□□□□□ -2.19
CHRDL1Q9BU40 Y_RNA.5-201ENST00000362334 102 ntBASIC1.37□□□□□ -2.19
CHRDL1Q9BU40 Y_RNA.128-201ENST00000363391 112 ntBASIC1.37□□□□□ -2.19
CHRDL1Q9BU40 SNORA63-201ENST00000363450 132 ntBASIC1.37□□□□□ -2.19
CHRDL1Q9BU40 RNU6-1188P-201ENST00000363795 107 ntBASIC1.37□□□□□ -2.19
CHRDL1Q9BU40 RNA5SP99-201ENST00000364020 114 ntBASIC1.37□□□□□ -2.19
CHRDL1Q9BU40 SNORD115-32-201ENST00000364079 82 ntBASIC1.37□□□□□ -2.19
CHRDL1Q9BU40 RNU6-418P-201ENST00000384035 107 ntBASIC1.37□□□□□ -2.19
CHRDL1Q9BU40 MIR559-201ENST00000385188 96 ntBASIC1.37□□□□□ -2.19
CHRDL1Q9BU40 RNU6-360P-201ENST00000390944 104 ntBASIC1.37□□□□□ -2.19
CHRDL1Q9BU40 RNY4P36-201ENST00000391116 96 ntBASIC1.37□□□□□ -2.19
CHRDL1Q9BU40 MIR548P-201ENST00000408336 84 ntBASIC1.37□□□□□ -2.19
CHRDL1Q9BU40 JTBP1-201ENST00000441314 247 ntBASIC1.37□□□□□ -2.19
CHRDL1Q9BU40 AL137792.2-201ENST00000443484 235 ntBASIC1.37□□□□□ -2.19
CHRDL1Q9BU40 AC016717.1-201ENST00000448918 286 ntBASIC1.37□□□□□ -2.19
CHRDL1Q9BU40 ATP5J2P3-201ENST00000451550 258 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 233.9 ms