Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 MTCO1P29-201ENST00000496868 288 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.5□□□□□ -2.33
UPK3BQ9BT76 AC092436.3-201ENST00000511788 257 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.5□□□□□ -2.33
UPK3BQ9BT76 RNU6-415P-201ENST00000516252 97 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 RNU7-128P-201ENST00000517247 62 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 MTND1P24-201ENST00000552175 861 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 CPDP1-201ENST00000579660 283 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 AC080078.2-201ENST00000603766 501 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 AC024933.1-201ENST00000608472 348 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 AL121757.2-201ENST00000611223 313 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 MIR6835-201ENST00000621552 64 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
UPK3BQ9BT76 U3.8-201ENST00000363675 217 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 SNORA2.2-201ENST00000365473 135 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 RNU6-17P-201ENST00000384245 107 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 RNU6-18P-201ENST00000384527 107 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 SNORD41-201ENST00000386967 70 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 SNORA12.1-201ENST00000390873 148 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 MIR450B-201ENST00000401182 78 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 RNA5SP504-201ENST00000410676 117 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.49□□□□□ -2.33
UPK3BQ9BT76 AL445567.1-201ENST00000439121 144 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 MTCO3P18-201ENST00000440206 761 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 AL031667.1-201ENST00000440222 725 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 STAG3L5P-204ENST00000443759 179 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.49□□□□□ -2.33
UPK3BQ9BT76 AC091133.4-201ENST00000511142 308 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 RNU6-1038P-201ENST00000516516 104 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 APOOP3-201ENST00000536787 586 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.49□□□□□ -2.33
UPK3BQ9BT76 AC133485.1-201ENST00000567176 124 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 AC138907.6-201ENST00000568401 126 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.49□□□□□ -2.33
UPK3BQ9BT76 MIR5692C1-201ENST00000585309 91 ntBASIC0.49□□□□□ -2.33
UPK3BQ9BT76 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
UPK3BQ9BT76 RNA5SP361-201ENST00000362686 118 ntBASIC0.48□□□□□ -2.33
UPK3BQ9BT76 SNORD87-201ENST00000364849 89 ntBASIC0.48□□□□□ -2.33
UPK3BQ9BT76 RNU4-66P-201ENST00000365199 138 ntBASIC0.48□□□□□ -2.33
UPK3BQ9BT76 RNU6-969P-201ENST00000383900 105 ntBASIC0.48□□□□□ -2.33
UPK3BQ9BT76 RNU6-1103P-201ENST00000384150 107 ntBASIC0.48□□□□□ -2.33
UPK3BQ9BT76 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.48□□□□□ -2.33
UPK3BQ9BT76 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.48□□□□□ -2.33
UPK3BQ9BT76 RNA5SP401-201ENST00000515920 127 ntBASIC0.48□□□□□ -2.33
UPK3BQ9BT76 SNORA19.2-201ENST00000516013 114 ntBASIC0.48□□□□□ -2.33
UPK3BQ9BT76 SNORA25.14-201ENST00000516481 132 ntBASIC0.48□□□□□ -2.33
UPK3BQ9BT76 FRG2DP-202ENST00000566967 323 ntBASIC0.48□□□□□ -2.33
UPK3BQ9BT76 AL590095.2-201ENST00000604136 117 ntBASIC0.48□□□□□ -2.33
UPK3BQ9BT76 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.48□□□□□ -2.33
UPK3BQ9BT76 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.48□□□□□ -2.33
UPK3BQ9BT76 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
UPK3BQ9BT76 SNORD115-8-201ENST00000363856 82 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 Y_RNA.265-201ENST00000364677 108 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 RNU1-133P-201ENST00000364867 167 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 SNORD115-38-201ENST00000365037 82 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 Y_RNA.378-201ENST00000365652 113 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
UPK3BQ9BT76 MIR32-201ENST00000384965 70 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 AL663109.1-201ENST00000411498 844 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.47□□□□□ -2.33
UPK3BQ9BT76 AL445305.1-201ENST00000432577 575 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 AL606489.2-201ENST00000433886 234 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.47□□□□□ -2.33
UPK3BQ9BT76 AL353572.1-201ENST00000442490 417 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.47□□□□□ -2.33
UPK3BQ9BT76 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.47□□□□□ -2.33
UPK3BQ9BT76 TPT1P7-201ENST00000458300 517 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 RNU7-90P-201ENST00000459216 62 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 RPS26P48-201ENST00000491713 339 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 AC004817.2-201ENST00000561794 651 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 MIR4528-201ENST00000577763 90 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 MIR4714-201ENST00000580728 77 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 AC100830.2-201ENST00000581636 240 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 MIR4438-201ENST00000585271 93 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 AC007684.1-201ENST00000609671 477 ntBASIC0.47□□□□□ -2.33
UPK3BQ9BT76 CASC19-280ENST00000642102 1351 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 Y_RNA.118-201ENST00000363300 101 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 RNU4-12P-201ENST00000365233 139 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 Y_RNA.381-201ENST00000365666 102 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 MIR508-201ENST00000384857 115 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 AL590002.1-201ENST00000406554 418 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 RPS26P5-201ENST00000418544 335 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 MTCO2P16-201ENST00000436962 677 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 RPEP5-201ENST00000441137 268 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.46□□□□□ -2.34
UPK3BQ9BT76 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.46□□□□□ -2.34
UPK3BQ9BT76 LINC01399-202ENST00000458450 244 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 RNU7-21P-201ENST00000459430 62 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 RPS27P22-201ENST00000478056 241 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 Y_RNA.654-201ENST00000497848 106 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 AC022493.2-201ENST00000506122 481 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.46□□□□□ -2.34
UPK3BQ9BT76 RNU6-917P-201ENST00000516294 104 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 RNA5SP255-201ENST00000516370 107 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 RNU6-58P-201ENST00000517143 103 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.46□□□□□ -2.34
UPK3BQ9BT76 AC010620.1-201ENST00000601088 1102 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 AC012557.2-201ENST00000605919 418 ntBASIC0.46□□□□□ -2.34
UPK3BQ9BT76 AC006504.8-201ENST00000621046 635 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms