Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 MIR4765-201ENST00000585007 77 ntBASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 MIR4753-201ENST00000585119 83 ntBASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 TUG1_4.1-201ENST00000619464 181 ntBASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 AC090517.3-201ENST00000625170 141 ntBASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 AC073476.4-201ENST00000628409 72 ntBASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 U6.98-201ENST00000637157 84 ntBASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 RNY3P5-201ENST00000384127 102 ntBASIC3.63□□□□□ -1.83
ZKSCAN3Q9BRR0 AL355796.1-201ENST00000406706 323 ntBASIC3.63□□□□□ -1.83
ZKSCAN3Q9BRR0 SNORA36B-201ENST00000410438 131 ntBASIC3.63□□□□□ -1.83
ZKSCAN3Q9BRR0 AL121890.1-201ENST00000435457 205 ntBASIC3.63□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU6-1211P-201ENST00000459179 105 ntBASIC3.63□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU7-57P-201ENST00000459540 60 ntBASIC3.63□□□□□ -1.83
ZKSCAN3Q9BRR0 AC117454.1-201ENST00000491120 168 ntBASIC3.63□□□□□ -1.83
ZKSCAN3Q9BRR0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.63□□□□□ -1.83
ZKSCAN3Q9BRR0 RNA5SP217-201ENST00000515959 91 ntBASIC3.63□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU6-1337P-201ENST00000516525 95 ntBASIC3.63□□□□□ -1.83
ZKSCAN3Q9BRR0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.63□□□□□ -1.83
ZKSCAN3Q9BRR0 MIR5047-201ENST00000579212 100 ntBASIC3.63□□□□□ -1.83
ZKSCAN3Q9BRR0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.63□□□□□ -1.83
ZKSCAN3Q9BRR0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ZKSCAN3Q9BRR0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
ZKSCAN3Q9BRR0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
ZKSCAN3Q9BRR0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 Y_RNA.353-201ENST00000365440 108 ntBASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 SNORA20B-201ENST00000384220 132 ntBASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 MIR1294-201ENST00000408503 142 ntBASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU6-383P-201ENST00000410864 94 ntBASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU7-197P-201ENST00000458836 62 ntBASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU7-14P-201ENST00000459331 62 ntBASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 RPL36AP21-201ENST00000490372 323 ntBASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 AP003357.1-201ENST00000604497 148 ntBASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 AL162274.2-201ENST00000614406 332 ntBASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 snoZ196.1-201ENST00000625269 89 ntBASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 AC091152.2-201ENST00000591628 2569 ntBASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.62□□□□□ -1.83
ZKSCAN3Q9BRR0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 MIR422A-201ENST00000362286 90 ntBASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 SNORA27.1-201ENST00000362604 124 ntBASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU6-1323P-201ENST00000384025 107 ntBASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 Y_RNA.542-201ENST00000384641 111 ntBASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 RNA5SP354-201ENST00000391247 136 ntBASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU4-43P-201ENST00000410628 137 ntBASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 RPS12P18-201ENST00000442381 270 ntBASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 RPS27P1-201ENST00000450552 247 ntBASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 RN7SL330P-201ENST00000469709 307 ntBASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 RPS26P55-201ENST00000471178 356 ntBASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU6-561P-201ENST00000516222 102 ntBASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU7-116P-201ENST00000516940 62 ntBASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 MIR6844-201ENST00000637122 62 ntBASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 MIR7153-201ENST00000637758 57 ntBASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU6-486P-201ENST00000363116 107 ntBASIC3.6□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU6-215P-201ENST00000365169 102 ntBASIC3.6□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU6-1083P-201ENST00000384022 107 ntBASIC3.6□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU6-80P-201ENST00000384195 107 ntBASIC3.6□□□□□ -1.83
ZKSCAN3Q9BRR0 SNORD20-201ENST00000384550 80 ntBASIC3.6□□□□□ -1.83
ZKSCAN3Q9BRR0 Y_RNA.521-201ENST00000384560 114 ntBASIC3.6□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU6-221P-201ENST00000459541 99 ntBASIC3.6□□□□□ -1.83
ZKSCAN3Q9BRR0 RN7SL20P-201ENST00000488827 297 ntBASIC3.6□□□□□ -1.83
ZKSCAN3Q9BRR0 AC010598.1-201ENST00000510378 103 ntBASIC3.6□□□□□ -1.83
ZKSCAN3Q9BRR0 AC127455.1-201ENST00000565496 145 ntBASIC3.6□□□□□ -1.83
ZKSCAN3Q9BRR0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.6□□□□□ -1.83
ZKSCAN3Q9BRR0 AC012640.5-201ENST00000623897 319 ntBASIC3.6□□□□□ -1.83
ZKSCAN3Q9BRR0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ZKSCAN3Q9BRR0 MIR22-201ENST00000362190 85 ntBASIC3.59□□□□□ -1.83
ZKSCAN3Q9BRR0 Y_RNA.393-201ENST00000383936 102 ntBASIC3.59□□□□□ -1.83
ZKSCAN3Q9BRR0 SNORD116-13-201ENST00000384408 92 ntBASIC3.59□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU6-768P-201ENST00000384683 107 ntBASIC3.59□□□□□ -1.83
ZKSCAN3Q9BRR0 RPL32P35-201ENST00000415214 394 ntBASIC3.59□□□□□ -1.83
ZKSCAN3Q9BRR0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.59□□□□□ -1.83
ZKSCAN3Q9BRR0 RPS27P26-201ENST00000494583 239 ntBASIC3.59□□□□□ -1.83
ZKSCAN3Q9BRR0 AC083906.5-201ENST00000503722 328 ntBASIC3.59□□□□□ -1.83
ZKSCAN3Q9BRR0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.59□□□□□ -1.83
ZKSCAN3Q9BRR0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.59□□□□□ -1.83
ZKSCAN3Q9BRR0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.59□□□□□ -1.83
ZKSCAN3Q9BRR0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ZKSCAN3Q9BRR0 GABRG2-229ENST00000641017 3628 ntBASIC3.59□□□□□ -1.84
ZKSCAN3Q9BRR0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
ZKSCAN3Q9BRR0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 AC009487.4-201ENST00000624969 3585 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 413.2 ms