Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 MIR3674-201ENST00000636576 68 ntBASIC2.37□□□□□ -2.03
PAAF1Q9BRP4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.37□□□□□ -2.03
PAAF1Q9BRP4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
PAAF1Q9BRP4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PAAF1Q9BRP4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 RNU6-1309P-201ENST00000363305 108 ntBASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 RNU6-975P-201ENST00000384296 105 ntBASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 RNU6-937P-201ENST00000384325 106 ntBASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 SNORD14D-201ENST00000384390 87 ntBASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 RNU6-713P-201ENST00000384761 107 ntBASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 RNU6-130P-201ENST00000411112 103 ntBASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 RNU6-57P-201ENST00000411348 103 ntBASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 AC139712.2-201ENST00000424302 339 ntBASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 TOMM22P2-201ENST00000430735 237 ntBASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 AC016717.1-201ENST00000448918 286 ntBASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 NDUFB4P10-201ENST00000452541 359 ntBASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 RPL26P26-201ENST00000480251 434 ntBASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 RNU6-1143P-201ENST00000516125 104 ntBASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 MIR376A1-201ENST00000616574 68 ntBASIC2.36□□□□□ -2.03
PAAF1Q9BRP4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 MAPK10-266ENST00000641066 6555 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 Y_RNA.19-201ENST00000362462 99 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 SNORD114-1-201ENST00000362705 72 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 Y_RNA.176-201ENST00000363815 109 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 RNU6-770P-201ENST00000363929 105 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 Y_RNA.332-201ENST00000365271 113 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 DEFA7P-201ENST00000382676 285 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 RNU5A-5P-201ENST00000411054 116 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 HMGN2P3-201ENST00000433603 273 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 HMGN2P5-201ENST00000436882 273 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 AC005002.2-201ENST00000438228 269 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 IPO7P1-201ENST00000442031 636 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 UBL5P3-201ENST00000475112 231 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 RNU7-110P-201ENST00000516891 62 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 AL117187.1-201ENST00000555482 181 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 AL109918.3-201ENST00000603072 338 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 AC004467.1-201ENST00000615678 330 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 snoZ196.1-201ENST00000625269 89 ntBASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PAAF1Q9BRP4 RNU6-1266P-201ENST00000362794 105 ntBASIC2.34□□□□□ -2.03
PAAF1Q9BRP4 SNORA25.6-201ENST00000364121 118 ntBASIC2.34□□□□□ -2.03
PAAF1Q9BRP4 Y_RNA.214-201ENST00000364201 112 ntBASIC2.34□□□□□ -2.03
PAAF1Q9BRP4 Y_RNA.230-201ENST00000364348 109 ntBASIC2.34□□□□□ -2.03
PAAF1Q9BRP4 RNU1-148P-201ENST00000384472 162 ntBASIC2.34□□□□□ -2.03
PAAF1Q9BRP4 RNU6-21P-201ENST00000384710 107 ntBASIC2.34□□□□□ -2.03
PAAF1Q9BRP4 SNORA11.4-201ENST00000408823 129 ntBASIC2.34□□□□□ -2.03
PAAF1Q9BRP4 HMGN2P35-201ENST00000412164 270 ntBASIC2.34□□□□□ -2.03
PAAF1Q9BRP4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.34□□□□□ -2.03
PAAF1Q9BRP4 ELOCP20-201ENST00000422460 345 ntBASIC2.34□□□□□ -2.03
PAAF1Q9BRP4 DYNLT3P2-201ENST00000442517 295 ntBASIC2.34□□□□□ -2.03
PAAF1Q9BRP4 AK6P2-201ENST00000549020 471 ntBASIC2.34□□□□□ -2.03
PAAF1Q9BRP4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.34□□□□□ -2.03
PAAF1Q9BRP4 AL031274.2-201ENST00000599419 203 ntBASIC2.34□□□□□ -2.03
PAAF1Q9BRP4 AL162730.1-201ENST00000605734 292 ntBASIC2.34□□□□□ -2.03
PAAF1Q9BRP4 AC011373.1-201ENST00000607270 237 ntBASIC2.34□□□□□ -2.03
PAAF1Q9BRP4 AC022202.1-201ENST00000613515 211 ntBASIC2.34□□□□□ -2.03
PAAF1Q9BRP4 AC009831.4-201ENST00000620744 325 ntBASIC2.34□□□□□ -2.03
PAAF1Q9BRP4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 LINC02555-201ENST00000563933 1951 ntBASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 Y_RNA.149-201ENST00000363558 117 ntBASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 Y_RNA.276-201ENST00000364732 109 ntBASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 RNU6-1175P-201ENST00000365200 107 ntBASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 RNU6-1235P-201ENST00000384559 107 ntBASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 RNU6-160P-201ENST00000384591 107 ntBASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 MIR504-201ENST00000385065 83 ntBASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 RNU6-1109P-201ENST00000391187 107 ntBASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 MIR1262-201ENST00000408276 93 ntBASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 RNU6-498P-201ENST00000459468 107 ntBASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 AC010531.2-201ENST00000465012 153 ntBASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 AC006380.1-201ENST00000603598 186 ntBASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 PRR13P7-201ENST00000605538 430 ntBASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 AC091932.3-201ENST00000624223 323 ntBASIC2.33□□□□□ -2.04
PAAF1Q9BRP4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
PAAF1Q9BRP4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.32□□□□□ -2.04
PAAF1Q9BRP4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.32□□□□□ -2.04
PAAF1Q9BRP4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PAAF1Q9BRP4 Y_RNA.462-201ENST00000384268 102 ntBASIC2.32□□□□□ -2.04
PAAF1Q9BRP4 RNU6-1105P-201ENST00000384774 107 ntBASIC2.32□□□□□ -2.04
PAAF1Q9BRP4 MIR764-201ENST00000390811 85 ntBASIC2.32□□□□□ -2.04
PAAF1Q9BRP4 MIR1302-3-201ENST00000408128 138 ntBASIC2.32□□□□□ -2.04
PAAF1Q9BRP4 MIR1185-2-201ENST00000408687 86 ntBASIC2.32□□□□□ -2.04
PAAF1Q9BRP4 RNA5SP270-201ENST00000411361 118 ntBASIC2.32□□□□□ -2.04
PAAF1Q9BRP4 RPL23AP36-201ENST00000413895 458 ntBASIC2.32□□□□□ -2.04
PAAF1Q9BRP4 AL390729.2-201ENST00000416137 156 ntBASIC2.32□□□□□ -2.04
PAAF1Q9BRP4 AL358176.2-201ENST00000425769 204 ntBASIC2.32□□□□□ -2.04
PAAF1Q9BRP4 AL731563.1-201ENST00000442202 214 ntBASIC2.32□□□□□ -2.04
PAAF1Q9BRP4 AL357134.1-201ENST00000445848 426 ntBASIC2.32□□□□□ -2.04
PAAF1Q9BRP4 AL139109.1-201ENST00000455491 297 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms