Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 SNORA4.4-201ENST00000515921 135 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 RNU6-1114P-201ENST00000516022 107 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 AC022868.1-201ENST00000517767 391 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 AC023442.1-201ENST00000531247 422 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 AC006600.1-201ENST00000572529 153 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 MIR4529-201ENST00000578110 78 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 MIR5695-201ENST00000579717 85 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 SNRPGP20-201ENST00000604477 205 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 RPL17P51-201ENST00000605218 238 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 Y_RNA.812-201ENST00000610788 101 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 Y_RNA.784-201ENST00000613803 101 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 AC040896.1-201ENST00000613819 479 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 TCL6_2.1-201ENST00000615162 119 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 AC005296.1-201ENST00000616145 209 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 Y_RNA.787-201ENST00000616522 101 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 Y_RNA.780-201ENST00000617336 101 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 U2.1-201ENST00000618978 145 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 Y_RNA.801-201ENST00000619005 101 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 RNU6-873P-201ENST00000363833 107 ntBASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 RNU6-457P-201ENST00000363999 107 ntBASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 SNORA33.2-201ENST00000365413 134 ntBASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 RNU6-281P-201ENST00000384212 103 ntBASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 SNORA40.19-201ENST00000390846 128 ntBASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 RNU1-139P-201ENST00000391307 165 ntBASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 RNU2-20P-201ENST00000410425 191 ntBASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 EIF1P2-201ENST00000428233 350 ntBASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 RPS23P5-201ENST00000495419 428 ntBASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 AC090255.1-201ENST00000495779 349 ntBASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 ATP5EP1-201ENST00000510257 156 ntBASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 SNORA25.14-201ENST00000516481 132 ntBASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 SNORA25.15-201ENST00000516487 89 ntBASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 RNU5F-4P-201ENST00000516581 114 ntBASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 HSBP1P1-201ENST00000555205 166 ntBASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 MIR5188-201ENST00000583467 113 ntBASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 AC007229.1-201ENST00000590455 412 ntBASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 VN1R91P-201ENST00000594377 169 ntBASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.03□□□□□ -2.08
RTP3Q9BQQ7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.02□□□□□ -2.09
RTP3Q9BQQ7 RNU6-879P-201ENST00000364328 108 ntBASIC2.02□□□□□ -2.09
RTP3Q9BQQ7 RNU6-245P-201ENST00000384020 107 ntBASIC2.02□□□□□ -2.09
RTP3Q9BQQ7 RNU6-708P-201ENST00000384217 107 ntBASIC2.02□□□□□ -2.09
RTP3Q9BQQ7 MIR489-201ENST00000384923 84 ntBASIC2.02□□□□□ -2.09
RTP3Q9BQQ7 MRPL42P3-201ENST00000401492 326 ntBASIC2.02□□□□□ -2.09
RTP3Q9BQQ7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.02□□□□□ -2.09
RTP3Q9BQQ7 HMGN2P18-201ENST00000450680 270 ntBASIC2.02□□□□□ -2.09
RTP3Q9BQQ7 RNU6-717P-201ENST00000459076 104 ntBASIC2.02□□□□□ -2.09
RTP3Q9BQQ7 RNU7-14P-201ENST00000459331 62 ntBASIC2.02□□□□□ -2.09
RTP3Q9BQQ7 snoU13.18-201ENST00000459483 104 ntBASIC2.02□□□□□ -2.09
RTP3Q9BQQ7 RPS29P11-201ENST00000496507 171 ntBASIC2.02□□□□□ -2.09
RTP3Q9BQQ7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.02□□□□□ -2.09
RTP3Q9BQQ7 AC233702.2-202ENST00000562547 291 ntBASIC2.02□□□□□ -2.09
RTP3Q9BQQ7 MIR5006-201ENST00000583027 110 ntBASIC2.02□□□□□ -2.09
RTP3Q9BQQ7 AC022202.1-201ENST00000613515 211 ntBASIC2.02□□□□□ -2.09
RTP3Q9BQQ7 AC005592.1-201ENST00000566527 1640 ntBASIC2.02□□□□□ -2.09
RTP3Q9BQQ7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 RNU6-280P-201ENST00000364145 104 ntBASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 MIR9-3-201ENST00000385084 90 ntBASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 MIR628-201ENST00000385229 95 ntBASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 MIR320B2-201ENST00000408479 138 ntBASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 AC009237.7-201ENST00000447357 229 ntBASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 PRELID3BP1-201ENST00000457142 540 ntBASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 RNA5SP137-201ENST00000516833 135 ntBASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 MIR2355-201ENST00000517199 87 ntBASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 AC091144.1-201ENST00000519573 138 ntBASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 AC093023.1-201ENST00000547375 507 ntBASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 MIR4448-201ENST00000584360 86 ntBASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 AC002984.1-201ENST00000591692 448 ntBASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 AC022432.1-201ENST00000595739 310 ntBASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.01□□□□□ -2.09
RTP3Q9BQQ7 AC008555.8-201ENST00000623602 2168 ntBASIC2□□□□□ -2.09
RTP3Q9BQQ7 RNU6-1301P-201ENST00000362724 104 ntBASIC2□□□□□ -2.09
RTP3Q9BQQ7 SNORA67.5-201ENST00000391036 107 ntBASIC2□□□□□ -2.09
RTP3Q9BQQ7 Y_RNA.645-201ENST00000391229 102 ntBASIC2□□□□□ -2.09
RTP3Q9BQQ7 AL357139.1-201ENST00000407792 426 ntBASIC2□□□□□ -2.09
RTP3Q9BQQ7 EDDM3CP-201ENST00000415977 425 ntBASIC2□□□□□ -2.09
RTP3Q9BQQ7 AP1B1P2-201ENST00000416196 106 ntBASIC2□□□□□ -2.09
RTP3Q9BQQ7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2□□□□□ -2.09
RTP3Q9BQQ7 SNORD13-201ENST00000459299 104 ntBASIC2□□□□□ -2.09
RTP3Q9BQQ7 AC093259.1-201ENST00000509755 300 ntBASIC2□□□□□ -2.09
RTP3Q9BQQ7 SCARNA15.1-201ENST00000516384 125 ntBASIC2□□□□□ -2.09
RTP3Q9BQQ7 RNU6-911P-201ENST00000516523 104 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms