Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.58□□□□□ -2
VRK1Q99986 MIR4446-201ENST00000578505 67 ntBASIC2.58□□□□□ -2
VRK1Q99986 RPL12P50-201ENST00000603116 116 ntBASIC2.58□□□□□ -2
VRK1Q99986 U2.14-201ENST00000615943 113 ntBASIC2.58□□□□□ -2
VRK1Q99986 FO624990.1-201ENST00000636373 85 ntBASIC2.58□□□□□ -2
VRK1Q99986 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
VRK1Q99986 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.58□□□□□ -2
VRK1Q99986 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.58□□□□□ -2
VRK1Q99986 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.57□□□□□ -2
VRK1Q99986 UBE2WP1-201ENST00000362030 340 ntBASIC2.57□□□□□ -2
VRK1Q99986 MIR340-201ENST00000362125 95 ntBASIC2.57□□□□□ -2
VRK1Q99986 SNORA25.1-201ENST00000362326 128 ntBASIC2.57□□□□□ -2
VRK1Q99986 SNORA20.1-201ENST00000364790 130 ntBASIC2.57□□□□□ -2
VRK1Q99986 RNU6-1248P-201ENST00000391096 64 ntBASIC2.57□□□□□ -2
VRK1Q99986 SNORD58.1-201ENST00000391313 66 ntBASIC2.57□□□□□ -2
VRK1Q99986 AL031003.1-201ENST00000404229 172 ntBASIC2.57□□□□□ -2
VRK1Q99986 AL451074.5-201ENST00000415894 435 ntBASIC2.57□□□□□ -2
VRK1Q99986 MTCO1P5-201ENST00000433573 344 ntBASIC2.57□□□□□ -2
VRK1Q99986 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.57□□□□□ -2
VRK1Q99986 MRPS10P1-201ENST00000448483 130 ntBASIC2.57□□□□□ -2
VRK1Q99986 SNORA59A-201ENST00000459326 152 ntBASIC2.57□□□□□ -2
VRK1Q99986 SNORA4.4-201ENST00000515921 135 ntBASIC2.57□□□□□ -2
VRK1Q99986 RNU6-856P-201ENST00000516959 98 ntBASIC2.57□□□□□ -2
VRK1Q99986 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.57□□□□□ -2
VRK1Q99986 AC006435.5-201ENST00000624486 112 ntBASIC2.57□□□□□ -2
VRK1Q99986 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
VRK1Q99986 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.56□□□□□ -2
VRK1Q99986 RNU6-324P-201ENST00000363957 106 ntBASIC2.56□□□□□ -2
VRK1Q99986 Y_RNA.329-201ENST00000365209 107 ntBASIC2.56□□□□□ -2
VRK1Q99986 RNU6-514P-201ENST00000384208 107 ntBASIC2.56□□□□□ -2
VRK1Q99986 SNORA54-201ENST00000384281 123 ntBASIC2.56□□□□□ -2
VRK1Q99986 SNORD14D-201ENST00000384390 87 ntBASIC2.56□□□□□ -2
VRK1Q99986 AL603910.2-201ENST00000407268 136 ntBASIC2.56□□□□□ -2
VRK1Q99986 RNU6-847P-201ENST00000411115 108 ntBASIC2.56□□□□□ -2
VRK1Q99986 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.56□□□□□ -2
VRK1Q99986 AC024067.1-201ENST00000426199 223 ntBASIC2.56□□□□□ -2
VRK1Q99986 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.56□□□□□ -2
VRK1Q99986 AC010598.1-201ENST00000510378 103 ntBASIC2.56□□□□□ -2
VRK1Q99986 SNORA27.4-201ENST00000516650 95 ntBASIC2.56□□□□□ -2
VRK1Q99986 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.56□□□□□ -2
VRK1Q99986 BX284668.6-201ENST00000606899 438 ntBASIC2.56□□□□□ -2
VRK1Q99986 AC013412.1-201ENST00000610687 192 ntBASIC2.56□□□□□ -2
VRK1Q99986 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.56□□□□□ -2
VRK1Q99986 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VRK1Q99986 Y_RNA.44-201ENST00000362676 108 ntBASIC2.55□□□□□ -2
VRK1Q99986 RNU6-1266P-201ENST00000362794 105 ntBASIC2.55□□□□□ -2
VRK1Q99986 SNORA80A-201ENST00000363922 136 ntBASIC2.55□□□□□ -2
VRK1Q99986 SNORA38-201ENST00000363946 132 ntBASIC2.55□□□□□ -2
VRK1Q99986 RNU6-1240P-201ENST00000365155 104 ntBASIC2.55□□□□□ -2
VRK1Q99986 AL590004.2-201ENST00000404787 371 ntBASIC2.55□□□□□ -2
VRK1Q99986 RNU6-710P-201ENST00000410424 105 ntBASIC2.55□□□□□ -2
VRK1Q99986 AC245102.2-201ENST00000448956 180 ntBASIC2.55□□□□□ -2
VRK1Q99986 RNU1-131P-201ENST00000458943 161 ntBASIC2.55□□□□□ -2
VRK1Q99986 SNORD65B-201ENST00000459126 73 ntBASIC2.55□□□□□ -2
VRK1Q99986 SNORA70.12-201ENST00000516084 153 ntBASIC2.55□□□□□ -2
VRK1Q99986 RNU6-191P-201ENST00000516295 94 ntBASIC2.55□□□□□ -2
VRK1Q99986 Y_RNA.673-201ENST00000516306 88 ntBASIC2.55□□□□□ -2
VRK1Q99986 SNORA31.15-201ENST00000516771 132 ntBASIC2.55□□□□□ -2
VRK1Q99986 RNU6-794P-201ENST00000517261 64 ntBASIC2.55□□□□□ -2
VRK1Q99986 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.55□□□□□ -2
VRK1Q99986 AC026271.5-201ENST00000577873 130 ntBASIC2.55□□□□□ -2
VRK1Q99986 DEFB117-201ENST00000602356 141 ntBASIC2.55□□□□□ -2
VRK1Q99986 Y_RNA.60-201ENST00000362831 98 ntBASIC2.54□□□□□ -2
VRK1Q99986 SNORA20B-201ENST00000384220 132 ntBASIC2.54□□□□□ -2
VRK1Q99986 Y_RNA.477-201ENST00000384352 108 ntBASIC2.54□□□□□ -2
VRK1Q99986 RNU1-148P-201ENST00000384472 162 ntBASIC2.54□□□□□ -2
VRK1Q99986 AL355796.1-201ENST00000406706 323 ntBASIC2.54□□□□□ -2
VRK1Q99986 MIR1262-201ENST00000408276 93 ntBASIC2.54□□□□□ -2
VRK1Q99986 RNU2-61P-201ENST00000411069 191 ntBASIC2.54□□□□□ -2
VRK1Q99986 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.54□□□□□ -2
VRK1Q99986 AC107016.2-201ENST00000547968 190 ntBASIC2.54□□□□□ -2
VRK1Q99986 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
VRK1Q99986 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.53□□□□□ -2
VRK1Q99986 RNU4-80P-201ENST00000363200 141 ntBASIC2.53□□□□□ -2
VRK1Q99986 RNU6-271P-201ENST00000363858 105 ntBASIC2.53□□□□□ -2
VRK1Q99986 MIR873-201ENST00000401120 77 ntBASIC2.53□□□□□ -2
VRK1Q99986 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.53□□□□□ -2
VRK1Q99986 AC016909.1-201ENST00000415916 166 ntBASIC2.53□□□□□ -2
VRK1Q99986 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
VRK1Q99986 AC107083.1-201ENST00000439643 279 ntBASIC2.53□□□□□ -2
VRK1Q99986 RN7SL20P-201ENST00000488827 297 ntBASIC2.53□□□□□ -2
VRK1Q99986 AC091959.1-201ENST00000495857 238 ntBASIC2.53□□□□□ -2
VRK1Q99986 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.53□□□□□ -2
VRK1Q99986 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.53□□□□□ -2
VRK1Q99986 AC005357.1-201ENST00000588399 301 ntBASIC2.53□□□□□ -2
VRK1Q99986 AL512605.2-201ENST00000592972 256 ntBASIC2.53□□□□□ -2
VRK1Q99986 AC010900.2-201ENST00000604508 210 ntBASIC2.53□□□□□ -2
VRK1Q99986 AC141273.2-201ENST00000618989 130 ntBASIC2.53□□□□□ -2
VRK1Q99986 MIR6852-201ENST00000621699 66 ntBASIC2.53□□□□□ -2
VRK1Q99986 AC010297.1-201ENST00000623948 149 ntBASIC2.53□□□□□ -2
VRK1Q99986 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
VRK1Q99986 SNORA27.1-201ENST00000362604 124 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 Y_RNA.275-201ENST00000364726 110 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 Y_RNA.539-201ENST00000384635 107 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 Y_RNA.552-201ENST00000384665 112 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
VRK1Q99986 SUMO1P4-201ENST00000429430 302 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.52□□□□□ -2.01
VRK1Q99986 AC108059.2-201ENST00000434626 151 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 AL121890.1-201ENST00000435457 205 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms