Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 MIR3171-201ENST00000584270 74 ntBASIC2.25□□□□□ -2.05
SIN3AQ96ST3 SNORD14A-201ENST00000606526 91 ntBASIC2.25□□□□□ -2.05
SIN3AQ96ST3 SNORD58B-201ENST00000607313 66 ntBASIC2.25□□□□□ -2.05
SIN3AQ96ST3 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.25□□□□□ -2.05
SIN3AQ96ST3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SIN3AQ96ST3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SIN3AQ96ST3 RNU6-1301P-201ENST00000362724 104 ntBASIC2.24□□□□□ -2.05
SIN3AQ96ST3 RNU1-42P-201ENST00000364033 160 ntBASIC2.24□□□□□ -2.05
SIN3AQ96ST3 MIR329-1-201ENST00000385028 80 ntBASIC2.24□□□□□ -2.05
SIN3AQ96ST3 AL357139.1-201ENST00000407792 426 ntBASIC2.24□□□□□ -2.05
SIN3AQ96ST3 MIR320B2-201ENST00000408479 138 ntBASIC2.24□□□□□ -2.05
SIN3AQ96ST3 Y_RNA.605-201ENST00000410577 105 ntBASIC2.24□□□□□ -2.05
SIN3AQ96ST3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.24□□□□□ -2.05
SIN3AQ96ST3 AC093259.1-201ENST00000509755 300 ntBASIC2.24□□□□□ -2.05
SIN3AQ96ST3 RNU6-344P-201ENST00000516635 111 ntBASIC2.24□□□□□ -2.05
SIN3AQ96ST3 RNA5SP490-201ENST00000517141 136 ntBASIC2.24□□□□□ -2.05
SIN3AQ96ST3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.24□□□□□ -2.05
SIN3AQ96ST3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.24□□□□□ -2.05
SIN3AQ96ST3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.24□□□□□ -2.05
SIN3AQ96ST3 AC006157.1-201ENST00000611750 366 ntBASIC2.24□□□□□ -2.05
SIN3AQ96ST3 AL353997.5-201ENST00000618886 171 ntBASIC2.24□□□□□ -2.05
SIN3AQ96ST3 U2.1-201ENST00000618978 145 ntBASIC2.24□□□□□ -2.05
SIN3AQ96ST3 AC012640.5-201ENST00000623897 319 ntBASIC2.24□□□□□ -2.05
SIN3AQ96ST3 AL606534.2-204ENST00000635008 178 ntBASIC2.24□□□□□ -2.05
SIN3AQ96ST3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SIN3AQ96ST3 Y_RNA.28-201ENST00000362554 111 ntBASIC2.23□□□□□ -2.05
SIN3AQ96ST3 RNU1-62P-201ENST00000362599 164 ntBASIC2.23□□□□□ -2.05
SIN3AQ96ST3 RNU6-545P-201ENST00000362681 104 ntBASIC2.23□□□□□ -2.05
SIN3AQ96ST3 Y_RNA.80-201ENST00000362996 102 ntBASIC2.23□□□□□ -2.05
SIN3AQ96ST3 RNU6-60P-201ENST00000364792 103 ntBASIC2.23□□□□□ -2.05
SIN3AQ96ST3 SNORA22B-201ENST00000383876 138 ntBASIC2.23□□□□□ -2.05
SIN3AQ96ST3 Y_RNA.485-201ENST00000384395 102 ntBASIC2.23□□□□□ -2.05
SIN3AQ96ST3 MIR1262-201ENST00000408276 93 ntBASIC2.23□□□□□ -2.05
SIN3AQ96ST3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.23□□□□□ -2.05
SIN3AQ96ST3 MIR2355-201ENST00000517199 87 ntBASIC2.23□□□□□ -2.05
SIN3AQ96ST3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SIN3AQ96ST3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.23□□□□□ -2.05
SIN3AQ96ST3 MZT1P2-201ENST00000604387 248 ntBASIC2.23□□□□□ -2.05
SIN3AQ96ST3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.23□□□□□ -2.05
SIN3AQ96ST3 AC010999.1-201ENST00000611856 324 ntBASIC2.23□□□□□ -2.05
SIN3AQ96ST3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
SIN3AQ96ST3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SIN3AQ96ST3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SIN3AQ96ST3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
SIN3AQ96ST3 MIR340-201ENST00000362125 95 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 RNU6-661P-201ENST00000362409 107 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 Y_RNA.39-201ENST00000362620 98 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 RNU6-879P-201ENST00000364328 108 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 SNORD31B-201ENST00000364977 69 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 Y_RNA.332-201ENST00000365271 113 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 RNU6-708P-201ENST00000384217 107 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 RNU6-793P-201ENST00000384233 104 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 RNU6-1145P-201ENST00000384246 107 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 MIR1302-11-201ENST00000408051 138 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 MIR1302-9-201ENST00000408365 138 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 MIR1302-10-201ENST00000408734 138 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 RNU4-62P-201ENST00000410125 130 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.22□□□□□ -2.05
SIN3AQ96ST3 SRIP3-201ENST00000413200 219 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 EDDM3CP-201ENST00000415977 425 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.22□□□□□ -2.05
SIN3AQ96ST3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.22□□□□□ -2.05
SIN3AQ96ST3 AC016925.1-201ENST00000458303 298 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 AL163540.1-201ENST00000485382 386 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 RNU6-911P-201ENST00000516523 104 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 AK6P2-201ENST00000549020 471 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 RRN3P3-201ENST00000549207 578 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 AC015720.1-201ENST00000565251 277 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 AC006600.1-201ENST00000572529 153 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 MIR5188-201ENST00000583467 113 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 MIR4769-201ENST00000584126 77 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.22□□□□□ -2.05
SIN3AQ96ST3 VN1R91P-201ENST00000594377 169 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 AL356055.1-201ENST00000602528 446 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 MIR1302-2-201ENST00000607096 138 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 SNORD11B-201ENST00000607707 90 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 AL357075.2-201ENST00000614906 189 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 AC008873.1-201ENST00000625051 138 ntBASIC2.22□□□□□ -2.05
SIN3AQ96ST3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
SIN3AQ96ST3 RNU6-727P-201ENST00000363592 107 ntBASIC2.21□□□□□ -2.06
SIN3AQ96ST3 Y_RNA.179-201ENST00000363844 90 ntBASIC2.21□□□□□ -2.06
SIN3AQ96ST3 AC108667.1-201ENST00000428618 249 ntBASIC2.21□□□□□ -2.06
SIN3AQ96ST3 AC005534.2-201ENST00000431047 433 ntBASIC2.21□□□□□ -2.06
SIN3AQ96ST3 AC007395.1-201ENST00000451333 677 ntBASIC2.21□□□□□ -2.06
SIN3AQ96ST3 AL137159.1-201ENST00000452808 512 ntBASIC2.21□□□□□ -2.06
SIN3AQ96ST3 HMGN2P9-201ENST00000476875 229 ntBASIC2.21□□□□□ -2.06
SIN3AQ96ST3 AL442163.3-201ENST00000554110 156 ntBASIC2.21□□□□□ -2.06
SIN3AQ96ST3 MTND5P35-201ENST00000557537 1720 ntBASIC2.21□□□□□ -2.06
SIN3AQ96ST3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
SIN3AQ96ST3 RNU5F-3P-201ENST00000363767 117 ntBASIC2.2□□□□□ -2.06
SIN3AQ96ST3 SNORA3A-201ENST00000364113 130 ntBASIC2.2□□□□□ -2.06
SIN3AQ96ST3 SNORD87-201ENST00000364849 89 ntBASIC2.2□□□□□ -2.06
SIN3AQ96ST3 Y_RNA.415-201ENST00000384012 112 ntBASIC2.2□□□□□ -2.06
SIN3AQ96ST3 RNY3P4-201ENST00000384428 101 ntBASIC2.2□□□□□ -2.06
SIN3AQ96ST3 RNU6-1026P-201ENST00000384465 108 ntBASIC2.2□□□□□ -2.06
SIN3AQ96ST3 AL033519.2-201ENST00000403958 392 ntBASIC2.2□□□□□ -2.06
SIN3AQ96ST3 MIR1283-1-201ENST00000408494 87 ntBASIC2.2□□□□□ -2.06
SIN3AQ96ST3 AL160004.2-201ENST00000432935 350 ntBASIC2.2□□□□□ -2.06
SIN3AQ96ST3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.2□□□□□ -2.06
SIN3AQ96ST3 AC112492.4-201ENST00000456549 352 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms