Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 Y_RNA.521-201ENST00000384560 114 ntBASIC3.62□□□□□ -1.83
SYNGAP1Q96PV0 AC074290.1-201ENST00000448883 135 ntBASIC3.62□□□□□ -1.83
SYNGAP1Q96PV0 RPS3P1-201ENST00000456781 192 ntBASIC3.62□□□□□ -1.83
SYNGAP1Q96PV0 AC112693.2-201ENST00000556538 232 ntBASIC3.62□□□□□ -1.83
SYNGAP1Q96PV0 MIR3186-201ENST00000577404 85 ntBASIC3.62□□□□□ -1.83
SYNGAP1Q96PV0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.62□□□□□ -1.83
SYNGAP1Q96PV0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.62□□□□□ -1.83
SYNGAP1Q96PV0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.62□□□□□ -1.83
SYNGAP1Q96PV0 AL391516.1-201ENST00000554380 2449 ntBASIC3.62□□□□□ -1.83
SYNGAP1Q96PV0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 RNA5SP205-201ENST00000364653 136 ntBASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 RNU6-407P-201ENST00000365280 104 ntBASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 Y_RNA.368-201ENST00000365547 113 ntBASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 Y_RNA.456-201ENST00000384232 111 ntBASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 RNU1-57P-201ENST00000384491 166 ntBASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 Y_RNA.542-201ENST00000384641 111 ntBASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 MIR548B-201ENST00000385247 97 ntBASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 MIR616-201ENST00000385293 97 ntBASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 AL714022.1-201ENST00000439897 151 ntBASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 RNA5SP445-201ENST00000515889 115 ntBASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 SNORA70.12-201ENST00000516084 153 ntBASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 MIR4724-201ENST00000579485 89 ntBASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 UBL5P2-201ENST00000583788 219 ntBASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.61□□□□□ -1.83
SYNGAP1Q96PV0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 Y_RNA.127-201ENST00000363386 109 ntBASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 U3.8-201ENST00000363675 217 ntBASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 Y_RNA.218-201ENST00000364218 104 ntBASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 Y_RNA.353-201ENST00000365440 108 ntBASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 MIR15B-201ENST00000385045 98 ntBASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 AL355497.1-201ENST00000406262 551 ntBASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 EEF1B2P7-201ENST00000451177 676 ntBASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 snoU13.14-201ENST00000459372 104 ntBASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 AC114982.1-201ENST00000469402 321 ntBASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 RN7SL330P-201ENST00000469709 307 ntBASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 RN7SL442P-201ENST00000473804 320 ntBASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 uc_338.25-201ENST00000613756 156 ntBASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 AC110774.1-201ENST00000623567 2018 ntBASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 AC090517.3-201ENST00000625170 141 ntBASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.6□□□□□ -1.83
SYNGAP1Q96PV0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
SYNGAP1Q96PV0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SYNGAP1Q96PV0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SYNGAP1Q96PV0 RNU6-805P-201ENST00000365643 106 ntBASIC3.59□□□□□ -1.83
SYNGAP1Q96PV0 MIR539-201ENST00000365690 78 ntBASIC3.59□□□□□ -1.83
SYNGAP1Q96PV0 RNU6-44P-201ENST00000384045 107 ntBASIC3.59□□□□□ -1.83
SYNGAP1Q96PV0 AL606845.1-201ENST00000404881 255 ntBASIC3.59□□□□□ -1.83
SYNGAP1Q96PV0 RNU7-23P-201ENST00000459465 62 ntBASIC3.59□□□□□ -1.83
SYNGAP1Q96PV0 AC117454.1-201ENST00000491120 168 ntBASIC3.59□□□□□ -1.83
SYNGAP1Q96PV0 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.59□□□□□ -1.83
SYNGAP1Q96PV0 RNU5F-4P-201ENST00000516581 114 ntBASIC3.59□□□□□ -1.83
SYNGAP1Q96PV0 AC025754.2-201ENST00000606491 432 ntBASIC3.59□□□□□ -1.83
SYNGAP1Q96PV0 AC068647.2-201ENST00000637380 353 ntBASIC3.59□□□□□ -1.83
SYNGAP1Q96PV0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SYNGAP1Q96PV0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.59□□□□□ -1.84
SYNGAP1Q96PV0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
SYNGAP1Q96PV0 AC026241.1-201ENST00000517873 2142 ntBASIC3.59□□□□□ -1.84
SYNGAP1Q96PV0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 AC007256.1-201ENST00000392253 2765 ntBASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 RNA5SP295-201ENST00000362655 121 ntBASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 Y_RNA.310-201ENST00000365063 113 ntBASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 RNU6-80P-201ENST00000384195 107 ntBASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 RNU6-750P-201ENST00000390946 107 ntBASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 RN7SKP220-201ENST00000410611 288 ntBASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 RNU6-383P-201ENST00000410864 94 ntBASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 snoU13.15-201ENST00000459407 104 ntBASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 Y_RNA.686-201ENST00000516548 134 ntBASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 MIR5047-201ENST00000579212 100 ntBASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 MIR6844-201ENST00000637122 62 ntBASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SYNGAP1Q96PV0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 RNA5SP383-201ENST00000362934 120 ntBASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 Y_RNA.229-201ENST00000364347 113 ntBASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 RNU6-728P-201ENST00000365375 104 ntBASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 MIR518C-201ENST00000384822 101 ntBASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 AL035461.1-201ENST00000421490 332 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms