Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 MIR876-201ENST00000401147 81 ntBASIC-1.28□□□□□ -2.61
CFAP54Q96N23 SKA2P1-201ENST00000425592 390 ntBASIC-1.28□□□□□ -2.61
CFAP54Q96N23 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.28□□□□□ -2.61
CFAP54Q96N23 SUMO1P3-201ENST00000439961 304 ntBASIC-1.28□□□□□ -2.61
CFAP54Q96N23 PCNPP5-201ENST00000452246 481 ntBASIC-1.28□□□□□ -2.61
CFAP54Q96N23 MIR4752-201ENST00000579672 72 ntBASIC-1.28□□□□□ -2.61
CFAP54Q96N23 U6.48-201ENST00000618523 106 ntBASIC-1.28□□□□□ -2.61
CFAP54Q96N23 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-1.28□□□□□ -2.61
CFAP54Q96N23 RNY3P11-201ENST00000364153 102 ntBASIC-1.28□□□□□ -2.61
CFAP54Q96N23 SNORD115-44-201ENST00000365391 82 ntBASIC-1.28□□□□□ -2.61
CFAP54Q96N23 MIR186-201ENST00000384988 86 ntBASIC-1.28□□□□□ -2.61
CFAP54Q96N23 SNORD41-201ENST00000386967 70 ntBASIC-1.28□□□□□ -2.61
CFAP54Q96N23 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC-1.28□□□□□ -2.61
CFAP54Q96N23 AP000533.3-201ENST00000447704 118 ntBASIC-1.28□□□□□ -2.61
CFAP54Q96N23 AC116655.1-201ENST00000508324 901 ntBASIC-1.28□□□□□ -2.61
CFAP54Q96N23 SNORD22.1-201ENST00000516331 125 ntBASIC-1.28□□□□□ -2.61
CFAP54Q96N23 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-1.28□□□□□ -2.61
CFAP54Q96N23 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.28□□□□□ -2.61
CFAP54Q96N23 SNORD115-28-201ENST00000363931 81 ntBASIC-1.29□□□□□ -2.62
CFAP54Q96N23 RNU6-431P-201ENST00000383874 107 ntBASIC-1.29□□□□□ -2.62
CFAP54Q96N23 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-1.29□□□□□ -2.62
CFAP54Q96N23 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.29□□□□□ -2.62
CFAP54Q96N23 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC-1.29□□□□□ -2.62
CFAP54Q96N23 AC007684.1-201ENST00000609671 477 ntBASIC-1.29□□□□□ -2.62
CFAP54Q96N23 MTND5P18-201ENST00000445624 1801 ntBASIC-1.29□□□□□ -2.62
CFAP54Q96N23 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.29□□□□□ -2.62
CFAP54Q96N23 MIR527-201ENST00000385244 85 ntBASIC-1.29□□□□□ -2.62
CFAP54Q96N23 RNU2-15P-201ENST00000410692 191 ntBASIC-1.29□□□□□ -2.62
CFAP54Q96N23 AL445193.1-201ENST00000441183 141 ntBASIC-1.29□□□□□ -2.62
CFAP54Q96N23 AL139824.2-201ENST00000458731 1095 ntBASIC-1.29□□□□□ -2.62
CFAP54Q96N23 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC-1.29□□□□□ -2.62
CFAP54Q96N23 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.29□□□□□ -2.62
CFAP54Q96N23 AL357078.3-201ENST00000607528 618 ntBASIC-1.29□□□□□ -2.62
CFAP54Q96N23 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.29□□□□□ -2.62
CFAP54Q96N23 Y_RNA.370-201ENST00000365589 108 ntBASIC-1.29□□□□□ -2.62
CFAP54Q96N23 SNORD51-201ENST00000384320 80 ntBASIC-1.29□□□□□ -2.62
CFAP54Q96N23 AC022028.1-201ENST00000412054 408 ntBASIC-1.29□□□□□ -2.62
CFAP54Q96N23 AC016907.1-201ENST00000419483 435 ntBASIC-1.29□□□□□ -2.62
CFAP54Q96N23 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.29□□□□□ -2.62
CFAP54Q96N23 RNU6-534P-201ENST00000364877 106 ntBASIC-1.3□□□□□ -2.62
CFAP54Q96N23 MIR802-201ENST00000390235 94 ntBASIC-1.3□□□□□ -2.62
CFAP54Q96N23 RNU6-576P-201ENST00000390854 102 ntBASIC-1.3□□□□□ -2.62
CFAP54Q96N23 TAF13P2-201ENST00000416876 286 ntBASIC-1.3□□□□□ -2.62
CFAP54Q96N23 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.3□□□□□ -2.62
CFAP54Q96N23 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-1.3□□□□□ -2.62
CFAP54Q96N23 MIR3192-201ENST00000584920 77 ntBASIC-1.3□□□□□ -2.62
CFAP54Q96N23 AL162424.1-201ENST00000602325 221 ntBASIC-1.3□□□□□ -2.62
CFAP54Q96N23 AL096861.1-201ENST00000610899 123 ntBASIC-1.3□□□□□ -2.62
CFAP54Q96N23 RNA5SP117-201ENST00000365294 118 ntBASIC-1.3□□□□□ -2.62
CFAP54Q96N23 SNORA81-201ENST00000408493 178 ntBASIC-1.3□□□□□ -2.62
CFAP54Q96N23 BTBD7P2-201ENST00000441962 620 ntBASIC-1.3□□□□□ -2.62
CFAP54Q96N23 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-1.3□□□□□ -2.62
CFAP54Q96N23 MIR4639-201ENST00000584938 69 ntBASIC-1.3□□□□□ -2.62
CFAP54Q96N23 AL358072.1-201ENST00000604156 575 ntBASIC-1.3□□□□□ -2.62
CFAP54Q96N23 DLEU2_6.3-201ENST00000340052 136 ntBASIC-1.31□□□□□ -2.62
CFAP54Q96N23 RNU6-726P-201ENST00000364680 107 ntBASIC-1.31□□□□□ -2.62
CFAP54Q96N23 AL117339.3-201ENST00000418733 162 ntBASIC-1.31□□□□□ -2.62
CFAP54Q96N23 BX276092.1-201ENST00000427368 251 ntBASIC-1.31□□□□□ -2.62
CFAP54Q96N23 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-1.31□□□□□ -2.62
CFAP54Q96N23 AL360271.2-201ENST00000447710 161 ntBASIC-1.31□□□□□ -2.62
CFAP54Q96N23 MTND2P24-201ENST00000453434 806 ntBASIC-1.31□□□□□ -2.62
CFAP54Q96N23 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-1.31□□□□□ -2.62
CFAP54Q96N23 RNU6-390P-201ENST00000516259 103 ntBASIC-1.31□□□□□ -2.62
CFAP54Q96N23 RNU6-135P-201ENST00000516769 101 ntBASIC-1.31□□□□□ -2.62
CFAP54Q96N23 AP003733.2-201ENST00000529409 171 ntBASIC-1.31□□□□□ -2.62
CFAP54Q96N23 DLEU2_6.2-201ENST00000620994 136 ntBASIC-1.31□□□□□ -2.62
CFAP54Q96N23 AC079416.3-201ENST00000624479 549 ntBASIC-1.31□□□□□ -2.62
CFAP54Q96N23 VN1R83P-201ENST00000595685 445 ntBASIC-1.31□□□□□ -2.62
CFAP54Q96N23 AC010205.1-201ENST00000616668 449 ntBASIC-1.31□□□□□ -2.62
CFAP54Q96N23 RNA5SP48-201ENST00000363969 126 ntBASIC-1.31□□□□□ -2.62
CFAP54Q96N23 MIR889-201ENST00000401280 79 ntBASIC-1.31□□□□□ -2.62
CFAP54Q96N23 AL109755.1-201ENST00000401791 649 ntBASIC-1.31□□□□□ -2.62
CFAP54Q96N23 RNU1-29P-201ENST00000606574 126 ntBASIC-1.31□□□□□ -2.62
CFAP54Q96N23 RNU6-702P-201ENST00000364982 107 ntBASIC-1.32□□□□□ -2.62
CFAP54Q96N23 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.32□□□□□ -2.62
CFAP54Q96N23 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.32□□□□□ -2.62
CFAP54Q96N23 AL354692.1-201ENST00000423044 315 ntBASIC-1.32□□□□□ -2.62
CFAP54Q96N23 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC-1.32□□□□□ -2.62
CFAP54Q96N23 MTND1P4-201ENST00000435196 415 ntBASIC-1.32□□□□□ -2.62
CFAP54Q96N23 RNA5SP484-201ENST00000458857 111 ntBASIC-1.32□□□□□ -2.62
CFAP54Q96N23 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-1.32□□□□□ -2.62
CFAP54Q96N23 RPL23AP75-201ENST00000491601 451 ntBASIC-1.32□□□□□ -2.62
CFAP54Q96N23 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.32□□□□□ -2.62
CFAP54Q96N23 snoZ40.1-201ENST00000364540 72 ntBASIC-1.32□□□□□ -2.62
CFAP54Q96N23 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.32□□□□□ -2.62
CFAP54Q96N23 RNA5SP475-201ENST00000410568 110 ntBASIC-1.32□□□□□ -2.62
CFAP54Q96N23 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.32□□□□□ -2.62
CFAP54Q96N23 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.32□□□□□ -2.62
CFAP54Q96N23 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.32□□□□□ -2.62
CFAP54Q96N23 AGGF1P4-201ENST00000568249 801 ntBASIC-1.32□□□□□ -2.62
CFAP54Q96N23 MIR4280-201ENST00000582178 76 ntBASIC-1.32□□□□□ -2.62
CFAP54Q96N23 RNU6-86P-201ENST00000606534 107 ntBASIC-1.32□□□□□ -2.62
CFAP54Q96N23 MIR8054-201ENST00000620877 86 ntBASIC-1.32□□□□□ -2.62
CFAP54Q96N23 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.33□□□□□ -2.62
CFAP54Q96N23 RNU6-364P-201ENST00000384387 107 ntBASIC-1.33□□□□□ -2.62
CFAP54Q96N23 RNA5SP467-201ENST00000391274 118 ntBASIC-1.33□□□□□ -2.62
CFAP54Q96N23 POLR2KP2-201ENST00000438155 177 ntBASIC-1.33□□□□□ -2.62
CFAP54Q96N23 AC046134.1-201ENST00000514454 666 ntBASIC-1.33□□□□□ -2.62
CFAP54Q96N23 RNU6-479P-201ENST00000516348 105 ntBASIC-1.33□□□□□ -2.62
CFAP54Q96N23 AL139022.2-201ENST00000606934 443 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms