Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MIR449A-201ENST00000362113 91 ntBASIC2.48□□□□□ -2.01
VPS50Q96JG6 Y_RNA.16-201ENST00000362421 102 ntBASIC2.48□□□□□ -2.01
VPS50Q96JG6 RNU1-112P-201ENST00000364401 164 ntBASIC2.48□□□□□ -2.01
VPS50Q96JG6 RNU6-702P-201ENST00000364982 107 ntBASIC2.48□□□□□ -2.01
VPS50Q96JG6 RNU6-1175P-201ENST00000365200 107 ntBASIC2.48□□□□□ -2.01
VPS50Q96JG6 RNA5SP240-201ENST00000365355 128 ntBASIC2.48□□□□□ -2.01
VPS50Q96JG6 SNORD63-201ENST00000384262 68 ntBASIC2.48□□□□□ -2.01
VPS50Q96JG6 Y_RNA.541-201ENST00000384640 113 ntBASIC2.48□□□□□ -2.01
VPS50Q96JG6 Y_RNA.570-201ENST00000384750 101 ntBASIC2.48□□□□□ -2.01
VPS50Q96JG6 MIR1302-6-201ENST00000408466 90 ntBASIC2.48□□□□□ -2.01
VPS50Q96JG6 HMGN2P9-201ENST00000476875 229 ntBASIC2.48□□□□□ -2.01
VPS50Q96JG6 Y_RNA.668-201ENST00000516233 93 ntBASIC2.48□□□□□ -2.01
VPS50Q96JG6 CYCSP23-201ENST00000519781 313 ntBASIC2.48□□□□□ -2.01
VPS50Q96JG6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS50Q96JG6 AC005176.2-201ENST00000596933 147 ntBASIC2.48□□□□□ -2.01
VPS50Q96JG6 RPL17P51-201ENST00000605218 238 ntBASIC2.48□□□□□ -2.01
VPS50Q96JG6 MIR6895-201ENST00000613497 78 ntBASIC2.48□□□□□ -2.01
VPS50Q96JG6 AC008873.1-201ENST00000625051 138 ntBASIC2.48□□□□□ -2.01
VPS50Q96JG6 AC080100.1-201ENST00000624239 5356 ntBASIC2.48□□□□□ -2.01
VPS50Q96JG6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
VPS50Q96JG6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
VPS50Q96JG6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS50Q96JG6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
VPS50Q96JG6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VPS50Q96JG6 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VPS50Q96JG6 RNA5SP68-201ENST00000363885 119 ntBASIC2.47□□□□□ -2.01
VPS50Q96JG6 RNU6-454P-201ENST00000364292 107 ntBASIC2.47□□□□□ -2.01
VPS50Q96JG6 Y_RNA.462-201ENST00000384268 102 ntBASIC2.47□□□□□ -2.01
VPS50Q96JG6 RNU6-1203P-201ENST00000410703 110 ntBASIC2.47□□□□□ -2.01
VPS50Q96JG6 AL513328.1-201ENST00000446460 224 ntBASIC2.47□□□□□ -2.01
VPS50Q96JG6 HSPE1P25-201ENST00000455484 251 ntBASIC2.47□□□□□ -2.01
VPS50Q96JG6 RNU6-496P-201ENST00000516145 99 ntBASIC2.47□□□□□ -2.01
VPS50Q96JG6 RNU7-110P-201ENST00000516891 62 ntBASIC2.47□□□□□ -2.01
VPS50Q96JG6 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS50Q96JG6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS50Q96JG6 AC004817.2-201ENST00000561794 651 ntBASIC2.47□□□□□ -2.01
VPS50Q96JG6 MIR6817-201ENST00000615588 66 ntBASIC2.47□□□□□ -2.01
VPS50Q96JG6 AP001282.2-201ENST00000616149 309 ntBASIC2.47□□□□□ -2.01
VPS50Q96JG6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.47□□□□□ -2.01
VPS50Q96JG6 MIR3674-201ENST00000636576 68 ntBASIC2.47□□□□□ -2.01
VPS50Q96JG6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
VPS50Q96JG6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS50Q96JG6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS50Q96JG6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS50Q96JG6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
VPS50Q96JG6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.46□□□□□ -2.02
VPS50Q96JG6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS50Q96JG6 RNU6-1026P-201ENST00000384465 108 ntBASIC2.46□□□□□ -2.02
VPS50Q96JG6 MIR586-201ENST00000385035 97 ntBASIC2.46□□□□□ -2.02
VPS50Q96JG6 Y_RNA.581-201ENST00000391017 97 ntBASIC2.46□□□□□ -2.02
VPS50Q96JG6 MIR1283-1-201ENST00000408494 87 ntBASIC2.46□□□□□ -2.02
VPS50Q96JG6 RNU6-1199P-201ENST00000411249 104 ntBASIC2.46□□□□□ -2.02
VPS50Q96JG6 AC016717.1-201ENST00000448918 286 ntBASIC2.46□□□□□ -2.02
VPS50Q96JG6 TRBVB-201ENST00000477100 408 ntBASIC2.46□□□□□ -2.02
VPS50Q96JG6 HMGB3P17-201ENST00000504195 649 ntBASIC2.46□□□□□ -2.02
VPS50Q96JG6 RNU6-991P-201ENST00000516168 107 ntBASIC2.46□□□□□ -2.02
VPS50Q96JG6 RNA5SP24-201ENST00000516478 95 ntBASIC2.46□□□□□ -2.02
VPS50Q96JG6 RNA5SP490-201ENST00000517141 136 ntBASIC2.46□□□□□ -2.02
VPS50Q96JG6 RNU6-667P-201ENST00000517186 102 ntBASIC2.46□□□□□ -2.02
VPS50Q96JG6 AC025754.2-201ENST00000606491 432 ntBASIC2.46□□□□□ -2.02
VPS50Q96JG6 SNORD14A-201ENST00000606526 91 ntBASIC2.46□□□□□ -2.02
VPS50Q96JG6 AC011373.1-201ENST00000607270 237 ntBASIC2.46□□□□□ -2.02
VPS50Q96JG6 U4.3-201ENST00000621047 82 ntBASIC2.46□□□□□ -2.02
VPS50Q96JG6 CTSLP2-204ENST00000629029 392 ntBASIC2.46□□□□□ -2.02
VPS50Q96JG6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
VPS50Q96JG6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.46□□□□□ -2.02
VPS50Q96JG6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS50Q96JG6 SNORD81.1-201ENST00000363064 77 ntBASIC2.45□□□□□ -2.02
VPS50Q96JG6 SNORD31B-201ENST00000364977 69 ntBASIC2.45□□□□□ -2.02
VPS50Q96JG6 SNORA25B-201ENST00000365507 128 ntBASIC2.45□□□□□ -2.02
VPS50Q96JG6 MIR561-201ENST00000385216 97 ntBASIC2.45□□□□□ -2.02
VPS50Q96JG6 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
VPS50Q96JG6 RNU2-38P-201ENST00000410856 79 ntBASIC2.45□□□□□ -2.02
VPS50Q96JG6 RNU5A-5P-201ENST00000411054 116 ntBASIC2.45□□□□□ -2.02
VPS50Q96JG6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
VPS50Q96JG6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS50Q96JG6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS50Q96JG6 AC023157.2-201ENST00000540596 141 ntBASIC2.45□□□□□ -2.02
VPS50Q96JG6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS50Q96JG6 AC131280.1-202ENST00000624067 4211 ntBASIC2.45□□□□□ -2.02
VPS50Q96JG6 AC010615.1-201ENST00000594254 1764 ntBASIC2.44□□□□□ -2.02
VPS50Q96JG6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS50Q96JG6 RNU4-82P-201ENST00000362443 140 ntBASIC2.44□□□□□ -2.02
VPS50Q96JG6 U3.8-201ENST00000363675 217 ntBASIC2.44□□□□□ -2.02
VPS50Q96JG6 Y_RNA.230-201ENST00000364348 109 ntBASIC2.44□□□□□ -2.02
VPS50Q96JG6 SNORA72.2-201ENST00000365028 127 ntBASIC2.44□□□□□ -2.02
VPS50Q96JG6 RNU6-1264P-201ENST00000383891 107 ntBASIC2.44□□□□□ -2.02
VPS50Q96JG6 SNORA6-201ENST00000384033 151 ntBASIC2.44□□□□□ -2.02
VPS50Q96JG6 RNU6-418P-201ENST00000384035 107 ntBASIC2.44□□□□□ -2.02
VPS50Q96JG6 SNORD14D-201ENST00000384390 87 ntBASIC2.44□□□□□ -2.02
VPS50Q96JG6 MIR27B-201ENST00000385129 97 ntBASIC2.44□□□□□ -2.02
VPS50Q96JG6 RNA5SP475-201ENST00000410568 110 ntBASIC2.44□□□□□ -2.02
VPS50Q96JG6 AC108938.1-201ENST00000451204 136 ntBASIC2.44□□□□□ -2.02
VPS50Q96JG6 SNORD127-201ENST00000458892 86 ntBASIC2.44□□□□□ -2.02
VPS50Q96JG6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.44□□□□□ -2.02
VPS50Q96JG6 DEFB108E-201ENST00000524692 240 ntBASIC2.44□□□□□ -2.02
VPS50Q96JG6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS50Q96JG6 MIR5694-201ENST00000581190 76 ntBASIC2.44□□□□□ -2.02
VPS50Q96JG6 MIR5092-201ENST00000583139 88 ntBASIC2.44□□□□□ -2.02
VPS50Q96JG6 AC022441.3-201ENST00000605737 136 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 191.6 ms