Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC108059.2-201ENST00000434626 151 ntBASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 RNU6-794P-201ENST00000517261 64 ntBASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 AC005357.1-201ENST00000588399 301 ntBASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 AC090425.1-201ENST00000610007 140 ntBASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 AC135776.4-201ENST00000624300 1904 ntBASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 AC009487.4-201ENST00000624969 3585 ntBASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 Y_RNA.54-201ENST00000362766 105 ntBASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 RNU6-324P-201ENST00000363957 106 ntBASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 RNA5SP125-201ENST00000364843 120 ntBASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 RNU6-1318P-201ENST00000365389 103 ntBASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 RNU6-975P-201ENST00000384296 105 ntBASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 RNU6-1248P-201ENST00000391096 64 ntBASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 AC104389.3-201ENST00000445629 235 ntBASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 AC096725.1-201ENST00000514266 313 ntBASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 Y_RNA.673-201ENST00000516306 88 ntBASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 RNU6-388P-201ENST00000517012 105 ntBASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 RNU6-389P-201ENST00000517048 105 ntBASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 AP002001.1-203ENST00000534002 267 ntBASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 BX284668.6-201ENST00000606899 438 ntBASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CTHRC1Q96CG8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CTHRC1Q96CG8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CTHRC1Q96CG8 RNU6-454P-201ENST00000364292 107 ntBASIC2.42□□□□□ -2.02
CTHRC1Q96CG8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.42□□□□□ -2.02
CTHRC1Q96CG8 AL137159.1-201ENST00000452808 512 ntBASIC2.42□□□□□ -2.02
CTHRC1Q96CG8 RPL23AP3-201ENST00000453844 468 ntBASIC2.42□□□□□ -2.02
CTHRC1Q96CG8 AC016925.1-201ENST00000458303 298 ntBASIC2.42□□□□□ -2.02
CTHRC1Q96CG8 RPS27AP9-201ENST00000477681 438 ntBASIC2.42□□□□□ -2.02
CTHRC1Q96CG8 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.42□□□□□ -2.02
CTHRC1Q96CG8 RNU2-12P-201ENST00000517216 168 ntBASIC2.42□□□□□ -2.02
CTHRC1Q96CG8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.42□□□□□ -2.02
CTHRC1Q96CG8 AL512605.2-201ENST00000592972 256 ntBASIC2.42□□□□□ -2.02
CTHRC1Q96CG8 U4atac.1-201ENST00000618345 95 ntBASIC2.42□□□□□ -2.02
CTHRC1Q96CG8 snoZ196.1-201ENST00000625269 89 ntBASIC2.42□□□□□ -2.02
CTHRC1Q96CG8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.42□□□□□ -2.02
CTHRC1Q96CG8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 Y_RNA.20-201ENST00000362479 113 ntBASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 Y_RNA.44-201ENST00000362676 108 ntBASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 RNU6-1266P-201ENST00000362794 105 ntBASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 Y_RNA.136-201ENST00000363444 102 ntBASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 SNORD27-201ENST00000363981 72 ntBASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 AL603910.2-201ENST00000407268 136 ntBASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 U3.40-201ENST00000408706 208 ntBASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 RNU6-1199P-201ENST00000411249 104 ntBASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 AC009238.1-201ENST00000442165 424 ntBASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 AC009237.6-201ENST00000446969 424 ntBASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 SUMO1P2-201ENST00000452524 304 ntBASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 Y_RNA.680-201ENST00000516441 93 ntBASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 MIR4513-201ENST00000581077 86 ntBASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 AL161431.1-201ENST00000618966 4205 ntBASIC2.41□□□□□ -2.02
CTHRC1Q96CG8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
CTHRC1Q96CG8 Y_RNA.60-201ENST00000362831 98 ntBASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 SNORA25B-201ENST00000365507 128 ntBASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 Y_RNA.515-201ENST00000384535 112 ntBASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 RNU6-57P-201ENST00000411348 103 ntBASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 AC123900.1-201ENST00000420390 96 ntBASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 MRPS10P1-201ENST00000448483 130 ntBASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 AC093259.1-201ENST00000509755 300 ntBASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 MTND1P19-201ENST00000511780 315 ntBASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 RNU2-34P-201ENST00000516534 121 ntBASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 RNU6-667P-201ENST00000517186 102 ntBASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 MIR3668-201ENST00000582138 75 ntBASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 MIR5092-201ENST00000583139 88 ntBASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 AC025754.2-201ENST00000606491 432 ntBASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 U2.14-201ENST00000615943 113 ntBASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 AC141273.2-201ENST00000618989 130 ntBASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.4□□□□□ -2.03
CTHRC1Q96CG8 Y_RNA.243-201ENST00000364481 109 ntBASIC2.39□□□□□ -2.03
CTHRC1Q96CG8 Y_RNA.257-201ENST00000364596 102 ntBASIC2.39□□□□□ -2.03
CTHRC1Q96CG8 RNU6-418P-201ENST00000384035 107 ntBASIC2.39□□□□□ -2.03
CTHRC1Q96CG8 RNU6-1235P-201ENST00000384559 107 ntBASIC2.39□□□□□ -2.03
CTHRC1Q96CG8 RNA5SP210-201ENST00000391034 120 ntBASIC2.39□□□□□ -2.03
CTHRC1Q96CG8 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.39□□□□□ -2.03
CTHRC1Q96CG8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.39□□□□□ -2.03
CTHRC1Q96CG8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.39□□□□□ -2.03
CTHRC1Q96CG8 RNU6-498P-201ENST00000459468 107 ntBASIC2.39□□□□□ -2.03
CTHRC1Q96CG8 RNU6-221P-201ENST00000459541 99 ntBASIC2.39□□□□□ -2.03
CTHRC1Q96CG8 SNORA4.4-201ENST00000515921 135 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 248 ms