Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.64□□□□□ -1.99
HPS3Q969F9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.64□□□□□ -1.99
HPS3Q969F9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.64□□□□□ -1.99
HPS3Q969F9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.64□□□□□ -1.99
HPS3Q969F9 RNU6-635P-201ENST00000516651 102 ntBASIC2.64□□□□□ -1.99
HPS3Q969F9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.64□□□□□ -1.99
HPS3Q969F9 AL117187.1-201ENST00000555482 181 ntBASIC2.64□□□□□ -1.99
HPS3Q969F9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.64□□□□□ -1.99
HPS3Q969F9 MYL12BP1-201ENST00000569826 507 ntBASIC2.64□□□□□ -1.99
HPS3Q969F9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.64□□□□□ -1.99
HPS3Q969F9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.64□□□□□ -1.99
HPS3Q969F9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HPS3Q969F9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HPS3Q969F9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.64□□□□□ -1.99
HPS3Q969F9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
HPS3Q969F9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HPS3Q969F9 RNA5SP289-201ENST00000362332 137 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 RNA5SP432-201ENST00000362480 116 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 Y_RNA.176-201ENST00000363815 109 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 RNU1-52P-201ENST00000384190 164 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 SNORD63-201ENST00000384262 68 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 MIR29C-201ENST00000385231 88 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 RNU6-57P-201ENST00000411348 103 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.63□□□□□ -1.99
HPS3Q969F9 AC005002.2-201ENST00000438228 269 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 AC016717.1-201ENST00000448918 286 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 AC010531.2-201ENST00000465012 153 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 MTATP8P1-201ENST00000467115 207 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 RNU6-1046P-201ENST00000516538 107 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 RNA5SP137-201ENST00000516833 135 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 IGLV3-17-201ENST00000519099 244 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 AC008269.2-201ENST00000561915 1105 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 AL031274.2-201ENST00000599419 203 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 AL109918.3-201ENST00000603072 338 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 AC067747.1-201ENST00000608026 250 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 AC004467.1-201ENST00000615678 330 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 MIR376A1-201ENST00000616574 68 ntBASIC2.63□□□□□ -1.99
HPS3Q969F9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.63□□□□□ -1.99
HPS3Q969F9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
HPS3Q969F9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
HPS3Q969F9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
HPS3Q969F9 Y_RNA.19-201ENST00000362462 99 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 RNU6-1266P-201ENST00000362794 105 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 Y_RNA.214-201ENST00000364201 112 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 SNORD114-30-201ENST00000364448 72 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 SNORA40.19-201ENST00000390846 128 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 RNU6-1109P-201ENST00000391187 107 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 MIR1262-201ENST00000408276 93 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.62□□□□□ -1.99
HPS3Q969F9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.62□□□□□ -1.99
HPS3Q969F9 AC008134.1-201ENST00000420943 193 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 ELOCP20-201ENST00000422460 345 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 MTCO1P44-201ENST00000441935 243 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 AL731563.1-201ENST00000442202 214 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 RNU6-221P-201ENST00000459541 99 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 AC008413.1-201ENST00000511864 177 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 RNA5SP24-201ENST00000516478 95 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 AC087441.2-201ENST00000529141 262 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 MIR3684-201ENST00000579779 74 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 AC006380.1-201ENST00000603598 186 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 AL162730.1-201ENST00000605734 292 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 AC103810.6-201ENST00000606708 136 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 AC011373.1-201ENST00000607270 237 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 MIR1291-201ENST00000627649 87 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 AC131280.1-202ENST00000624067 4211 ntBASIC2.62□□□□□ -1.99
HPS3Q969F9 RNU6-1309P-201ENST00000363305 108 ntBASIC2.61□□□□□ -1.99
HPS3Q969F9 Y_RNA.149-201ENST00000363558 117 ntBASIC2.61□□□□□ -1.99
HPS3Q969F9 RNU6-937P-201ENST00000384325 106 ntBASIC2.61□□□□□ -1.99
HPS3Q969F9 RNU6-713P-201ENST00000384761 107 ntBASIC2.61□□□□□ -1.99
HPS3Q969F9 RPL21P1-201ENST00000399532 476 ntBASIC2.61□□□□□ -1.99
HPS3Q969F9 AL358176.2-201ENST00000425769 204 ntBASIC2.61□□□□□ -1.99
HPS3Q969F9 RPS15AP28-201ENST00000435088 386 ntBASIC2.61□□□□□ -1.99
HPS3Q969F9 AL139109.1-201ENST00000455491 297 ntBASIC2.61□□□□□ -1.99
HPS3Q969F9 AC234781.5-201ENST00000508429 271 ntBASIC2.61□□□□□ -1.99
HPS3Q969F9 SNORA31.11-201ENST00000516528 139 ntBASIC2.61□□□□□ -1.99
HPS3Q969F9 AC021269.2-201ENST00000532318 330 ntBASIC2.61□□□□□ -1.99
HPS3Q969F9 AC064859.1-201ENST00000624741 174 ntBASIC2.61□□□□□ -1.99
HPS3Q969F9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.6□□□□□ -1.99
HPS3Q969F9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HPS3Q969F9 AC080100.1-201ENST00000624239 5356 ntBASIC2.6□□□□□ -1.99
HPS3Q969F9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HPS3Q969F9 SNORD115-3-201ENST00000363100 82 ntBASIC2.6□□□□□ -1.99
HPS3Q969F9 RNU6-1175P-201ENST00000365200 107 ntBASIC2.6□□□□□ -1.99
HPS3Q969F9 RNU6-21P-201ENST00000384710 107 ntBASIC2.6□□□□□ -1.99
HPS3Q969F9 RNU6-1105P-201ENST00000384774 107 ntBASIC2.6□□□□□ -1.99
HPS3Q969F9 MIR548F4-201ENST00000408515 105 ntBASIC2.6□□□□□ -1.99
HPS3Q969F9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.6□□□□□ -1.99
HPS3Q969F9 RPL23AP36-201ENST00000413895 458 ntBASIC2.6□□□□□ -1.99
HPS3Q969F9 CR769767.1-201ENST00000436337 346 ntBASIC2.6□□□□□ -1.99
HPS3Q969F9 AC018634.1-201ENST00000437554 401 ntBASIC2.6□□□□□ -1.99
HPS3Q969F9 IPO7P1-201ENST00000442031 636 ntBASIC2.6□□□□□ -1.99
HPS3Q969F9 RN7SL636P-201ENST00000497504 294 ntBASIC2.6□□□□□ -1.99
HPS3Q969F9 RNU7-110P-201ENST00000516891 62 ntBASIC2.6□□□□□ -1.99
HPS3Q969F9 AC091932.3-201ENST00000624223 323 ntBASIC2.6□□□□□ -1.99
HPS3Q969F9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HPS3Q969F9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.6□□□□□ -1.99
HPS3Q969F9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HPS3Q969F9 RNU6-238P-201ENST00000363313 106 ntBASIC2.59□□□□□ -1.99
HPS3Q969F9 SNORA67.4-201ENST00000384688 142 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms