Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.19□□□□□ -2.06
NPIPB3Q92617 AC010615.1-201ENST00000594254 1764 ntBASIC2.19□□□□□ -2.06
NPIPB3Q92617 snoU2-30.2-201ENST00000362805 70 ntBASIC2.19□□□□□ -2.06
NPIPB3Q92617 SNORA3A-201ENST00000364113 130 ntBASIC2.19□□□□□ -2.06
NPIPB3Q92617 RNU6-326P-201ENST00000365480 107 ntBASIC2.19□□□□□ -2.06
NPIPB3Q92617 Y_RNA.518-201ENST00000384552 113 ntBASIC2.19□□□□□ -2.06
NPIPB3Q92617 MIR518A2-201ENST00000384966 87 ntBASIC2.19□□□□□ -2.06
NPIPB3Q92617 RNA5SP465-201ENST00000391195 109 ntBASIC2.19□□□□□ -2.06
NPIPB3Q92617 BX510359.4-201ENST00000423750 193 ntBASIC2.19□□□□□ -2.06
NPIPB3Q92617 HMGN2P34-201ENST00000437647 269 ntBASIC2.19□□□□□ -2.06
NPIPB3Q92617 RN7SL297P-201ENST00000483161 293 ntBASIC2.19□□□□□ -2.06
NPIPB3Q92617 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.19□□□□□ -2.06
NPIPB3Q92617 RNU6-1041P-201ENST00000516254 102 ntBASIC2.19□□□□□ -2.06
NPIPB3Q92617 RNU6-1338P-201ENST00000516328 91 ntBASIC2.19□□□□□ -2.06
NPIPB3Q92617 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.19□□□□□ -2.06
NPIPB3Q92617 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.19□□□□□ -2.06
NPIPB3Q92617 AC245884.12-201ENST00000615364 59 ntBASIC2.19□□□□□ -2.06
NPIPB3Q92617 AP001282.2-201ENST00000616149 309 ntBASIC2.19□□□□□ -2.06
NPIPB3Q92617 AC084757.4-201ENST00000616350 526 ntBASIC2.19□□□□□ -2.06
NPIPB3Q92617 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NPIPB3Q92617 MTND5P6-201ENST00000422338 1798 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.18□□□□□ -2.06
NPIPB3Q92617 AL391987.6-201ENST00000305671 199 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
NPIPB3Q92617 MIR335-201ENST00000362173 94 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 MIR422A-201ENST00000362286 90 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 SNORA27.1-201ENST00000362604 124 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 Y_RNA.136-201ENST00000363444 102 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 Y_RNA.329-201ENST00000365209 107 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 MIR524-201ENST00000385242 87 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 RNU6-1248P-201ENST00000391096 64 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 RNU6-710P-201ENST00000410424 105 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.18□□□□□ -2.06
NPIPB3Q92617 AL121890.1-201ENST00000435457 205 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 CR769767.1-201ENST00000436337 346 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.18□□□□□ -2.06
NPIPB3Q92617 Y_RNA.668-201ENST00000516233 93 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 DEFB108E-201ENST00000524692 240 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 AL137100.2-201ENST00000555786 315 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.18□□□□□ -2.06
NPIPB3Q92617 MIR5194-201ENST00000582634 120 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.18□□□□□ -2.06
NPIPB3Q92617 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.18□□□□□ -2.06
NPIPB3Q92617 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.18□□□□□ -2.06
NPIPB3Q92617 CENPCP1-201ENST00000533085 2578 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 AC096644.4-201ENST00000563417 2912 ntBASIC2.18□□□□□ -2.06
NPIPB3Q92617 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.17□□□□□ -2.06
NPIPB3Q92617 SNORA25.1-201ENST00000362326 128 ntBASIC2.17□□□□□ -2.06
NPIPB3Q92617 Y_RNA.16-201ENST00000362421 102 ntBASIC2.17□□□□□ -2.06
NPIPB3Q92617 SNORA71.3-201ENST00000362582 128 ntBASIC2.17□□□□□ -2.06
NPIPB3Q92617 RNA5SP374-201ENST00000362939 125 ntBASIC2.17□□□□□ -2.06
NPIPB3Q92617 RNU6-407P-201ENST00000365280 104 ntBASIC2.17□□□□□ -2.06
NPIPB3Q92617 RNU6-514P-201ENST00000384208 107 ntBASIC2.17□□□□□ -2.06
NPIPB3Q92617 MIR670-201ENST00000390142 98 ntBASIC2.17□□□□□ -2.06
NPIPB3Q92617 AC010154.1-201ENST00000425857 269 ntBASIC2.17□□□□□ -2.06
NPIPB3Q92617 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.17□□□□□ -2.06
NPIPB3Q92617 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.17□□□□□ -2.06
NPIPB3Q92617 MRPS10P1-201ENST00000448483 130 ntBASIC2.17□□□□□ -2.06
NPIPB3Q92617 RPL23AP7-203ENST00000449021 469 ntBASIC2.17□□□□□ -2.06
NPIPB3Q92617 AL049873.1-201ENST00000480540 376 ntBASIC2.17□□□□□ -2.06
NPIPB3Q92617 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.17□□□□□ -2.06
NPIPB3Q92617 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.17□□□□□ -2.06
NPIPB3Q92617 SCARNA13-201ENST00000516672 275 ntBASIC2.17□□□□□ -2.06
NPIPB3Q92617 RNU6-826P-201ENST00000516827 104 ntBASIC2.17□□□□□ -2.06
NPIPB3Q92617 AC027419.1-201ENST00000522976 328 ntBASIC2.17□□□□□ -2.06
NPIPB3Q92617 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.17□□□□□ -2.06
NPIPB3Q92617 AC005786.1-201ENST00000588553 154 ntBASIC2.17□□□□□ -2.06
NPIPB3Q92617 DEFB117-201ENST00000602356 141 ntBASIC2.17□□□□□ -2.06
NPIPB3Q92617 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.17□□□□□ -2.06
NPIPB3Q92617 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NPIPB3Q92617 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
NPIPB3Q92617 Y_RNA.237-201ENST00000364439 102 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 SNORA67.1-201ENST00000364749 141 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 Y_RNA.401-201ENST00000383965 117 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 Y_RNA.418-201ENST00000384029 102 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 MIR34B-201ENST00000385076 84 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 MIR1283-2-201ENST00000408621 87 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 HMGN2P35-201ENST00000412164 270 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.16□□□□□ -2.06
NPIPB3Q92617 BX510359.1-201ENST00000456973 237 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 RPS26P55-201ENST00000471178 356 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 RPS27P22-201ENST00000478056 241 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 YWHAEP4-201ENST00000505390 198 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 SERF1AP1-201ENST00000514575 187 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 RNA5SP20-201ENST00000515976 84 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 RNU7-193P-201ENST00000516723 65 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 AP005660.1-201ENST00000522972 293 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 MIR4529-201ENST00000578110 78 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 AC062037.2-201ENST00000610137 73 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 MIR3651-201ENST00000630427 90 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 MIR338-201ENST00000636369 67 ntBASIC2.16□□□□□ -2.06
NPIPB3Q92617 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
NPIPB3Q92617 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
NPIPB3Q92617 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
NPIPB3Q92617 RNU6-505P-201ENST00000384427 107 ntBASIC2.15□□□□□ -2.07
NPIPB3Q92617 RNU6-417P-201ENST00000384712 107 ntBASIC2.15□□□□□ -2.07
NPIPB3Q92617 MIR515-2-201ENST00000384883 83 ntBASIC2.15□□□□□ -2.07
NPIPB3Q92617 MIR515-1-201ENST00000384884 83 ntBASIC2.15□□□□□ -2.07
NPIPB3Q92617 RNU11-3P-201ENST00000391111 133 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms