Protein–RNA interactions for Protein: Q8NEL0

CCDC54, Coiled-coil domain-containing protein 54, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54Q8NEL0 AC010095.1-201ENST00000443543 144 ntBASIC1.14□□□□□ -2.23
CCDC54Q8NEL0 AC245517.4-201ENST00000448601 281 ntBASIC1.14□□□□□ -2.23
CCDC54Q8NEL0 RPS26P45-201ENST00000471748 340 ntBASIC1.14□□□□□ -2.23
CCDC54Q8NEL0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC54Q8NEL0 RNU6-548P-201ENST00000517083 115 ntBASIC1.14□□□□□ -2.23
CCDC54Q8NEL0 RNU6-902P-201ENST00000517212 91 ntBASIC1.14□□□□□ -2.23
CCDC54Q8NEL0 AL590705.4-201ENST00000532209 134 ntBASIC1.14□□□□□ -2.23
CCDC54Q8NEL0 AP002001.1-203ENST00000534002 267 ntBASIC1.14□□□□□ -2.23
CCDC54Q8NEL0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.14□□□□□ -2.23
CCDC54Q8NEL0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC54Q8NEL0 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.14□□□□□ -2.23
CCDC54Q8NEL0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
CCDC54Q8NEL0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 AC091812.1-201ENST00000432235 1948 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 MTND5P16-201ENST00000460269 1703 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 RNU1-139P-201ENST00000391307 165 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 RNU6-1001P-201ENST00000411265 100 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 ELOCP21-201ENST00000412558 336 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 MTND3P8-201ENST00000412909 339 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 EIF1P1-201ENST00000421436 341 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 AC027119.1-201ENST00000440877 241 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 RNU1-123P-201ENST00000458950 160 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 snoU13.27-201ENST00000459278 104 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 AC114982.1-201ENST00000469402 321 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 RPL7P42-201ENST00000481005 679 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 AC093303.1-201ENST00000514549 295 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 RN7SKP179-201ENST00000516126 217 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 RNU1-92P-201ENST00000517017 135 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 AL161670.1-201ENST00000554348 137 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 MIR5695-201ENST00000579717 85 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 MIR4273-201ENST00000582824 84 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 AL929325.1-201ENST00000603096 117 ntBASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.13□□□□□ -2.23
CCDC54Q8NEL0 RNA5SP361-201ENST00000362686 118 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 U3.8-201ENST00000363675 217 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 RNU6-414P-201ENST00000363705 104 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 RNU6-1240P-201ENST00000365155 104 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 RNU6-793P-201ENST00000384233 104 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 MIR329-1-201ENST00000385028 80 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 Y_RNA.599-201ENST00000410489 109 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 RNU2-7P-201ENST00000410794 178 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 AC009161.1-201ENST00000417306 376 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 PDCL2P1-201ENST00000419302 352 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 OOSP1P1-201ENST00000423265 274 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 EIF1P2-201ENST00000428233 350 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 RPS3AP52-201ENST00000435639 297 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 MTND4P18-201ENST00000447010 465 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 NDUFB4P10-201ENST00000452541 359 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 AC103851.1-201ENST00000506833 274 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 RNU6-120P-201ENST00000516077 103 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 RNU6-1213P-201ENST00000517075 94 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 AC134698.4-201ENST00000523451 826 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 AL645939.4-201ENST00000604495 135 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 BNIP3P10-201ENST00000605360 577 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 ICE2P2-201ENST00000483823 2787 ntBASIC1.12□□□□□ -2.23
CCDC54Q8NEL0 Y_RNA.88-201ENST00000363029 99 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 RNU6-192P-201ENST00000391253 100 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 RNU6-1050P-201ENST00000410388 107 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 FCF1P9-201ENST00000412546 282 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 MTND3P10-201ENST00000450967 341 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 SNORD65B-201ENST00000459126 73 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 MTND4P17-201ENST00000470444 350 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 HMGN1P12-201ENST00000499125 195 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 HMGN1P13-201ENST00000505795 138 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 RNU7-175P-201ENST00000515915 61 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 RNU6-1016P-201ENST00000516689 94 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 RNA5SP481-201ENST00000516814 122 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 RNU1-54P-201ENST00000517181 120 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 AC019176.1-201ENST00000518519 225 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 AC105029.1-201ENST00000520250 669 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 AC019288.1-201ENST00000557918 224 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 AC068338.1-201ENST00000565567 176 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 AC080078.2-201ENST00000603766 501 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 AC021506.2-201ENST00000612354 169 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 U6.73-201ENST00000619194 103 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 MIR8063-201ENST00000621930 81 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 MTND5P35-201ENST00000557537 1720 ntBASIC1.11□□□□□ -2.23
CCDC54Q8NEL0 Y_RNA.179-201ENST00000363844 90 ntBASIC1.1□□□□□ -2.23
CCDC54Q8NEL0 RNU6-1013P-201ENST00000384180 107 ntBASIC1.1□□□□□ -2.23
CCDC54Q8NEL0 RNU6-318P-201ENST00000384283 103 ntBASIC1.1□□□□□ -2.23
CCDC54Q8NEL0 RNU6-541P-201ENST00000384709 110 ntBASIC1.1□□□□□ -2.23
CCDC54Q8NEL0 AL355796.1-201ENST00000406706 323 ntBASIC1.1□□□□□ -2.23
CCDC54Q8NEL0 MIR1289-2-201ENST00000408360 111 ntBASIC1.1□□□□□ -2.23
CCDC54Q8NEL0 AC004965.1-201ENST00000413033 213 ntBASIC1.1□□□□□ -2.23
CCDC54Q8NEL0 TOMM22P2-201ENST00000430735 237 ntBASIC1.1□□□□□ -2.23
CCDC54Q8NEL0 AL353997.1-201ENST00000432936 108 ntBASIC1.1□□□□□ -2.23
CCDC54Q8NEL0 MTND1P34-201ENST00000438556 671 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms