Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 AL449363.1-201ENST00000617815 186 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 AL355596.1-201ENST00000565399 3996 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 Y_RNA.84-201ENST00000363011 104 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 RNU6-1264P-201ENST00000383891 107 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 RNU6-546P-201ENST00000383991 107 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 RNU6-472P-201ENST00000384299 107 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 Y_RNA.483-201ENST00000384380 101 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 MIR95-201ENST00000385072 81 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 MT-TW-201ENST00000387382 68 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 Y_RNA.581-201ENST00000391017 97 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 RNA5SP475-201ENST00000410568 110 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 RNU2-25P-201ENST00000411041 191 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 RAB28P5-201ENST00000427490 651 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 Z96811.1-201ENST00000445880 108 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 RNU7-14P-201ENST00000459331 62 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 AC107222.1-201ENST00000510899 637 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 RNU6-826P-201ENST00000516827 104 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 SNORA48.11-201ENST00000517015 89 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 MIR3671-201ENST00000580455 88 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 MIR4423-201ENST00000580922 80 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 AL355297.2-201ENST00000604792 129 ntBASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.04□□□□□ -1.92
SMC1BQ8NDV3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SMC1BQ8NDV3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.03□□□□□ -1.92
SMC1BQ8NDV3 RNU4-90P-201ENST00000362773 141 ntBASIC3.03□□□□□ -1.92
SMC1BQ8NDV3 SNORD81.1-201ENST00000363064 77 ntBASIC3.03□□□□□ -1.92
SMC1BQ8NDV3 Y_RNA.188-201ENST00000363952 111 ntBASIC3.03□□□□□ -1.92
SMC1BQ8NDV3 Y_RNA.570-201ENST00000384750 101 ntBASIC3.03□□□□□ -1.92
SMC1BQ8NDV3 MIR300-201ENST00000401138 83 ntBASIC3.03□□□□□ -1.92
SMC1BQ8NDV3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SMC1BQ8NDV3 RNU2-32P-201ENST00000411193 191 ntBASIC3.03□□□□□ -1.92
SMC1BQ8NDV3 ELOCP21-201ENST00000412558 336 ntBASIC3.03□□□□□ -1.92
SMC1BQ8NDV3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.03□□□□□ -1.92
SMC1BQ8NDV3 AC110588.1-201ENST00000559699 137 ntBASIC3.03□□□□□ -1.92
SMC1BQ8NDV3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.03□□□□□ -1.92
SMC1BQ8NDV3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.03□□□□□ -1.92
SMC1BQ8NDV3 MIR3674-201ENST00000636576 68 ntBASIC3.03□□□□□ -1.92
SMC1BQ8NDV3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
SMC1BQ8NDV3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.02□□□□□ -1.93
SMC1BQ8NDV3 AL356292.1-201ENST00000283110 373 ntBASIC3.02□□□□□ -1.93
SMC1BQ8NDV3 RNU6-1305P-201ENST00000364353 104 ntBASIC3.02□□□□□ -1.93
SMC1BQ8NDV3 RNU6-1175P-201ENST00000365200 107 ntBASIC3.02□□□□□ -1.93
SMC1BQ8NDV3 MIR489-201ENST00000384923 84 ntBASIC3.02□□□□□ -1.93
SMC1BQ8NDV3 RNU6-1203P-201ENST00000410703 110 ntBASIC3.02□□□□□ -1.93
SMC1BQ8NDV3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.02□□□□□ -1.93
SMC1BQ8NDV3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.02□□□□□ -1.93
SMC1BQ8NDV3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.02□□□□□ -1.93
SMC1BQ8NDV3 AL445687.1-201ENST00000439946 251 ntBASIC3.02□□□□□ -1.93
SMC1BQ8NDV3 AC074290.1-201ENST00000448883 135 ntBASIC3.02□□□□□ -1.93
SMC1BQ8NDV3 AC003982.1-202ENST00000469928 248 ntBASIC3.02□□□□□ -1.93
SMC1BQ8NDV3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.02□□□□□ -1.93
SMC1BQ8NDV3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.02□□□□□ -1.93
SMC1BQ8NDV3 AC022616.8-201ENST00000533569 253 ntBASIC3.02□□□□□ -1.93
SMC1BQ8NDV3 AC008873.1-201ENST00000625051 138 ntBASIC3.02□□□□□ -1.93
SMC1BQ8NDV3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.02□□□□□ -1.93
SMC1BQ8NDV3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 snoU2_19.2-201ENST00000363024 80 ntBASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 U3.8-201ENST00000363675 217 ntBASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 SNORD87-201ENST00000364849 89 ntBASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 SNORA64-201ENST00000384674 134 ntBASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 MIR215-201ENST00000384858 110 ntBASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 MIR586-201ENST00000385035 97 ntBASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 MT-TG-201ENST00000387429 68 ntBASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 AL359511.1-201ENST00000402970 211 ntBASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 NDUFB4P10-201ENST00000452541 359 ntBASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 SNORD127-201ENST00000458892 86 ntBASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 RNU6-1132P-201ENST00000459214 107 ntBASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 AC114982.1-201ENST00000469402 321 ntBASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 RNU6-496P-201ENST00000516145 99 ntBASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 RNA5SP281-201ENST00000516504 135 ntBASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 RNU6-965P-201ENST00000516721 96 ntBASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 MIR4753-201ENST00000585119 83 ntBASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 AC010615.1-201ENST00000594254 1764 ntBASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.01□□□□□ -1.93
SMC1BQ8NDV3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SMC1BQ8NDV3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3□□□□□ -1.93
SMC1BQ8NDV3 MIR410-201ENST00000362222 80 ntBASIC3□□□□□ -1.93
SMC1BQ8NDV3 RNU1-109P-201ENST00000383960 147 ntBASIC3□□□□□ -1.93
SMC1BQ8NDV3 MIR561-201ENST00000385216 97 ntBASIC3□□□□□ -1.93
SMC1BQ8NDV3 MIR181B1-201ENST00000385240 110 ntBASIC3□□□□□ -1.93
SMC1BQ8NDV3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3□□□□□ -1.93
SMC1BQ8NDV3 RNA5SP504-201ENST00000410676 117 ntBASIC3□□□□□ -1.93
SMC1BQ8NDV3 TOMM22P2-201ENST00000430735 237 ntBASIC3□□□□□ -1.93
SMC1BQ8NDV3 RNU6-1271P-201ENST00000517049 105 ntBASIC3□□□□□ -1.93
SMC1BQ8NDV3 MIR4635-201ENST00000583759 79 ntBASIC3□□□□□ -1.93
SMC1BQ8NDV3 AC004467.1-201ENST00000615678 330 ntBASIC3□□□□□ -1.93
SMC1BQ8NDV3 AC006001.4-201ENST00000622243 395 ntBASIC3□□□□□ -1.93
SMC1BQ8NDV3 MIR6873-201ENST00000622788 63 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms