Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 MIR320A-201ENST00000385302 82 ntBASIC1.59□□□□□ -2.15
CCDC89Q8N998 RNU6-440P-201ENST00000390882 105 ntBASIC1.59□□□□□ -2.15
CCDC89Q8N998 RNU1-139P-201ENST00000391307 165 ntBASIC1.59□□□□□ -2.15
CCDC89Q8N998 TOMM22P2-201ENST00000430735 237 ntBASIC1.59□□□□□ -2.15
CCDC89Q8N998 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC89Q8N998 RNU4-49P-201ENST00000516080 140 ntBASIC1.59□□□□□ -2.15
CCDC89Q8N998 Y_RNA.675-201ENST00000516389 149 ntBASIC1.59□□□□□ -2.15
CCDC89Q8N998 RNU6-107P-201ENST00000516643 102 ntBASIC1.59□□□□□ -2.15
CCDC89Q8N998 CYCSP23-201ENST00000519781 313 ntBASIC1.59□□□□□ -2.15
CCDC89Q8N998 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.59□□□□□ -2.15
CCDC89Q8N998 AL512310.8-201ENST00000550183 120 ntBASIC1.59□□□□□ -2.15
CCDC89Q8N998 CYP3A52P-201ENST00000563326 91 ntBASIC1.59□□□□□ -2.15
CCDC89Q8N998 MIR8065-201ENST00000620577 100 ntBASIC1.59□□□□□ -2.15
CCDC89Q8N998 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CCDC89Q8N998 RNU6-842P-201ENST00000384269 107 ntBASIC1.58□□□□□ -2.16
CCDC89Q8N998 AL034345.1-201ENST00000407768 123 ntBASIC1.58□□□□□ -2.16
CCDC89Q8N998 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC89Q8N998 RNU7-128P-201ENST00000517247 62 ntBASIC1.58□□□□□ -2.16
CCDC89Q8N998 SUMO2P16-201ENST00000519475 264 ntBASIC1.58□□□□□ -2.16
CCDC89Q8N998 AL160236.1-201ENST00000556317 195 ntBASIC1.58□□□□□ -2.16
CCDC89Q8N998 AC090617.3-201ENST00000573670 475 ntBASIC1.58□□□□□ -2.16
CCDC89Q8N998 AL162424.1-201ENST00000602325 221 ntBASIC1.58□□□□□ -2.16
CCDC89Q8N998 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC89Q8N998 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC89Q8N998 RNU11-5P-201ENST00000391216 129 ntBASIC1.57□□□□□ -2.16
CCDC89Q8N998 RNU6-510P-201ENST00000391239 108 ntBASIC1.57□□□□□ -2.16
CCDC89Q8N998 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
CCDC89Q8N998 MTND1P34-201ENST00000438556 671 ntBASIC1.57□□□□□ -2.16
CCDC89Q8N998 AC010095.1-201ENST00000443543 144 ntBASIC1.57□□□□□ -2.16
CCDC89Q8N998 SNORD65B-201ENST00000459126 73 ntBASIC1.57□□□□□ -2.16
CCDC89Q8N998 AC092989.1-201ENST00000481235 277 ntBASIC1.57□□□□□ -2.16
CCDC89Q8N998 AC010598.1-201ENST00000510378 103 ntBASIC1.57□□□□□ -2.16
CCDC89Q8N998 AC091144.1-201ENST00000519573 138 ntBASIC1.57□□□□□ -2.16
CCDC89Q8N998 MIR4438-201ENST00000585271 93 ntBASIC1.57□□□□□ -2.16
CCDC89Q8N998 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC89Q8N998 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CCDC89Q8N998 Y_RNA.106-201ENST00000363189 100 ntBASIC1.56□□□□□ -2.16
CCDC89Q8N998 RPL23AP94-201ENST00000512518 302 ntBASIC1.56□□□□□ -2.16
CCDC89Q8N998 AC093023.1-201ENST00000547375 507 ntBASIC1.56□□□□□ -2.16
CCDC89Q8N998 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC89Q8N998 AC019288.1-201ENST00000557918 224 ntBASIC1.56□□□□□ -2.16
CCDC89Q8N998 MIR3664-201ENST00000579074 99 ntBASIC1.56□□□□□ -2.16
CCDC89Q8N998 AC018638.8-201ENST00000588755 281 ntBASIC1.56□□□□□ -2.16
CCDC89Q8N998 AL390123.1-201ENST00000603216 237 ntBASIC1.56□□□□□ -2.16
CCDC89Q8N998 Y_RNA.48-201ENST00000362710 103 ntBASIC1.55□□□□□ -2.16
CCDC89Q8N998 SNORA25.8-201ENST00000364831 128 ntBASIC1.55□□□□□ -2.16
CCDC89Q8N998 MIR517C-201ENST00000385103 95 ntBASIC1.55□□□□□ -2.16
CCDC89Q8N998 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CCDC89Q8N998 RPS27P22-201ENST00000478056 241 ntBASIC1.55□□□□□ -2.16
CCDC89Q8N998 MTND5P5-201ENST00000503764 376 ntBASIC1.55□□□□□ -2.16
CCDC89Q8N998 Y_RNA.682-201ENST00000516457 100 ntBASIC1.55□□□□□ -2.16
CCDC89Q8N998 AP003033.1-201ENST00000527244 415 ntBASIC1.55□□□□□ -2.16
CCDC89Q8N998 CBX3P8-201ENST00000532412 525 ntBASIC1.55□□□□□ -2.16
CCDC89Q8N998 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC89Q8N998 MIR3684-201ENST00000579779 74 ntBASIC1.55□□□□□ -2.16
CCDC89Q8N998 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CCDC89Q8N998 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC89Q8N998 Y_RNA.6-201ENST00000362350 114 ntBASIC1.54□□□□□ -2.16
CCDC89Q8N998 RNU1-42P-201ENST00000364033 160 ntBASIC1.54□□□□□ -2.16
CCDC89Q8N998 SNORA26.9-201ENST00000391322 122 ntBASIC1.54□□□□□ -2.16
CCDC89Q8N998 Y_RNA.595-201ENST00000410403 105 ntBASIC1.54□□□□□ -2.16
CCDC89Q8N998 MRPS10P1-201ENST00000448483 130 ntBASIC1.54□□□□□ -2.16
CCDC89Q8N998 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC89Q8N998 RNU6-329P-201ENST00000459618 107 ntBASIC1.54□□□□□ -2.16
CCDC89Q8N998 AC010469.2-201ENST00000496412 480 ntBASIC1.54□□□□□ -2.16
CCDC89Q8N998 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.54□□□□□ -2.16
CCDC89Q8N998 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC89Q8N998 AC046134.1-201ENST00000514454 666 ntBASIC1.54□□□□□ -2.16
CCDC89Q8N998 RN7SKP88-201ENST00000516847 250 ntBASIC1.54□□□□□ -2.16
CCDC89Q8N998 SNORD53B-201ENST00000577887 78 ntBASIC1.54□□□□□ -2.16
CCDC89Q8N998 AC018462.2-201ENST00000605375 395 ntBASIC1.54□□□□□ -2.16
CCDC89Q8N998 AL021879.1-201ENST00000611756 288 ntBASIC1.54□□□□□ -2.16
CCDC89Q8N998 7SK.8-201ENST00000612110 250 ntBASIC1.54□□□□□ -2.16
CCDC89Q8N998 7SK.11-201ENST00000615477 250 ntBASIC1.54□□□□□ -2.16
CCDC89Q8N998 AL513423.1-201ENST00000621695 132 ntBASIC1.54□□□□□ -2.16
CCDC89Q8N998 7SK.13-201ENST00000622040 250 ntBASIC1.54□□□□□ -2.16
CCDC89Q8N998 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.16
CCDC89Q8N998 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC89Q8N998 MTND5P16-201ENST00000460269 1703 ntBASIC1.54□□□□□ -2.16
CCDC89Q8N998 RNU6-222P-201ENST00000362438 107 ntBASIC1.53□□□□□ -2.16
CCDC89Q8N998 RNU6-593P-201ENST00000364716 112 ntBASIC1.53□□□□□ -2.16
CCDC89Q8N998 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CCDC89Q8N998 RNU6-700P-201ENST00000391043 107 ntBASIC1.53□□□□□ -2.16
CCDC89Q8N998 MIR190B-201ENST00000401119 79 ntBASIC1.53□□□□□ -2.16
CCDC89Q8N998 MIR1277-201ENST00000408536 78 ntBASIC1.53□□□□□ -2.16
CCDC89Q8N998 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC89Q8N998 RPL39P38-201ENST00000467018 153 ntBASIC1.53□□□□□ -2.16
CCDC89Q8N998 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC89Q8N998 AC027419.1-201ENST00000522976 328 ntBASIC1.53□□□□□ -2.16
CCDC89Q8N998 AC018630.2-201ENST00000534866 2403 ntBASIC1.53□□□□□ -2.16
CCDC89Q8N998 MIR5701-3-201ENST00000578890 82 ntBASIC1.53□□□□□ -2.16
CCDC89Q8N998 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC89Q8N998 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC89Q8N998 MIR3683-201ENST00000580847 82 ntBASIC1.53□□□□□ -2.16
CCDC89Q8N998 MIR5701-1-201ENST00000585138 82 ntBASIC1.53□□□□□ -2.16
CCDC89Q8N998 MIR5701-2-201ENST00000615634 82 ntBASIC1.53□□□□□ -2.16
CCDC89Q8N998 AC073349.3-201ENST00000617616 186 ntBASIC1.53□□□□□ -2.16
CCDC89Q8N998 AC099654.5-201ENST00000636479 350 ntBASIC1.53□□□□□ -2.16
CCDC89Q8N998 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.53□□□□□ -2.16
CCDC89Q8N998 MIR150-201ENST00000385048 84 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms