Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SNORA12.1-201ENST00000390873 148 ntBASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 RNU6-1148P-201ENST00000410992 104 ntBASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 ZNF885P-201ENST00000420174 1098 ntBASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 AC008134.1-201ENST00000420943 193 ntBASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 SNX2P2-201ENST00000424553 323 ntBASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 DAP3P1-201ENST00000441522 278 ntBASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 TRBVA-201ENST00000498804 316 ntBASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 ACA59.1-201ENST00000515966 143 ntBASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 AC024995.1-201ENST00000523014 93 ntBASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 AC104984.5-201ENST00000586878 94 ntBASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 AC124303.1-201ENST00000605703 360 ntBASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 AL359075.3-201ENST00000613288 217 ntBASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 RNU6-1059P-201ENST00000363752 98 ntBASIC1.13□□□□□ -2.23
CCDC50Q8IVM0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.13□□□□□ -2.23
CCDC50Q8IVM0 Y_RNA.554-201ENST00000384672 102 ntBASIC1.13□□□□□ -2.23
CCDC50Q8IVM0 RNU6-541P-201ENST00000384709 110 ntBASIC1.13□□□□□ -2.23
CCDC50Q8IVM0 RNU6-1031P-201ENST00000384773 107 ntBASIC1.13□□□□□ -2.23
CCDC50Q8IVM0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC50Q8IVM0 RPL23AP36-201ENST00000413895 458 ntBASIC1.13□□□□□ -2.23
CCDC50Q8IVM0 MTATP6P13-201ENST00000438531 667 ntBASIC1.13□□□□□ -2.23
CCDC50Q8IVM0 AC027419.1-201ENST00000522976 328 ntBASIC1.13□□□□□ -2.23
CCDC50Q8IVM0 AL390123.1-201ENST00000603216 237 ntBASIC1.13□□□□□ -2.23
CCDC50Q8IVM0 AP000942.3-201ENST00000603702 160 ntBASIC1.13□□□□□ -2.23
CCDC50Q8IVM0 MIR6078-201ENST00000611069 100 ntBASIC1.13□□□□□ -2.23
CCDC50Q8IVM0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.13□□□□□ -2.23
CCDC50Q8IVM0 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC50Q8IVM0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
CCDC50Q8IVM0 AL391987.6-201ENST00000305671 199 ntBASIC1.12□□□□□ -2.23
CCDC50Q8IVM0 RNU4-24P-201ENST00000364565 139 ntBASIC1.12□□□□□ -2.23
CCDC50Q8IVM0 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.12□□□□□ -2.23
CCDC50Q8IVM0 RNU6-17P-201ENST00000384245 107 ntBASIC1.12□□□□□ -2.23
CCDC50Q8IVM0 RNU6-18P-201ENST00000384527 107 ntBASIC1.12□□□□□ -2.23
CCDC50Q8IVM0 RNU6-159P-201ENST00000391080 106 ntBASIC1.12□□□□□ -2.23
CCDC50Q8IVM0 Z83846.1-201ENST00000446798 265 ntBASIC1.12□□□□□ -2.23
CCDC50Q8IVM0 AP000870.1-201ENST00000472927 406 ntBASIC1.12□□□□□ -2.23
CCDC50Q8IVM0 RNU6-1088P-201ENST00000516850 104 ntBASIC1.12□□□□□ -2.23
CCDC50Q8IVM0 MIR5696-201ENST00000578474 85 ntBASIC1.12□□□□□ -2.23
CCDC50Q8IVM0 MIR3664-201ENST00000579074 99 ntBASIC1.12□□□□□ -2.23
CCDC50Q8IVM0 MIR8054-201ENST00000620877 86 ntBASIC1.12□□□□□ -2.23
CCDC50Q8IVM0 Y_RNA.48-201ENST00000362710 103 ntBASIC1.11□□□□□ -2.23
CCDC50Q8IVM0 U3.8-201ENST00000363675 217 ntBASIC1.11□□□□□ -2.23
CCDC50Q8IVM0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CCDC50Q8IVM0 RNU6-440P-201ENST00000390882 105 ntBASIC1.11□□□□□ -2.23
CCDC50Q8IVM0 AC243428.1-201ENST00000421099 264 ntBASIC1.11□□□□□ -2.23
CCDC50Q8IVM0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.11□□□□□ -2.23
CCDC50Q8IVM0 RN7SKP88-201ENST00000516847 250 ntBASIC1.11□□□□□ -2.23
CCDC50Q8IVM0 AL355802.3-201ENST00000607571 545 ntBASIC1.11□□□□□ -2.23
CCDC50Q8IVM0 7SK.8-201ENST00000612110 250 ntBASIC1.11□□□□□ -2.23
CCDC50Q8IVM0 7SK.11-201ENST00000615477 250 ntBASIC1.11□□□□□ -2.23
CCDC50Q8IVM0 U6.73-201ENST00000619194 103 ntBASIC1.11□□□□□ -2.23
CCDC50Q8IVM0 7SK.13-201ENST00000622040 250 ntBASIC1.11□□□□□ -2.23
CCDC50Q8IVM0 AC068647.2-201ENST00000637380 353 ntBASIC1.11□□□□□ -2.23
CCDC50Q8IVM0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CCDC50Q8IVM0 RNU6-1123P-201ENST00000362347 106 ntBASIC1.1□□□□□ -2.23
CCDC50Q8IVM0 Y_RNA.436-201ENST00000384097 102 ntBASIC1.1□□□□□ -2.23
CCDC50Q8IVM0 MIR10B-201ENST00000385011 110 ntBASIC1.1□□□□□ -2.23
CCDC50Q8IVM0 RNU6-482P-201ENST00000391068 107 ntBASIC1.1□□□□□ -2.23
CCDC50Q8IVM0 FGF7P8-201ENST00000402994 292 ntBASIC1.1□□□□□ -2.23
CCDC50Q8IVM0 AC245047.3-201ENST00000429428 127 ntBASIC1.1□□□□□ -2.23
CCDC50Q8IVM0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC50Q8IVM0 RNU6-1198P-201ENST00000516904 67 ntBASIC1.1□□□□□ -2.23
CCDC50Q8IVM0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC50Q8IVM0 AC091144.1-201ENST00000519573 138 ntBASIC1.1□□□□□ -2.23
CCDC50Q8IVM0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC50Q8IVM0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC50Q8IVM0 MIR5695-201ENST00000579717 85 ntBASIC1.1□□□□□ -2.23
CCDC50Q8IVM0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
CCDC50Q8IVM0 Y_RNA.405-201ENST00000383979 100 ntBASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 Y_RNA.451-201ENST00000384200 100 ntBASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 RNU6-793P-201ENST00000384233 104 ntBASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 RNU6-831P-201ENST00000384548 107 ntBASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 Y_RNA.524-201ENST00000384564 100 ntBASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 Y_RNA.561-201ENST00000384694 100 ntBASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 RPL37P10-201ENST00000412884 288 ntBASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 DYNLT3P2-201ENST00000442517 295 ntBASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 MTND4P18-201ENST00000447010 465 ntBASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 RNU6-165P-201ENST00000517170 99 ntBASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 AC109635.3-201ENST00000529536 185 ntBASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 AC080078.3-201ENST00000605407 463 ntBASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 AL021879.1-201ENST00000611756 288 ntBASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 MIR8065-201ENST00000620577 100 ntBASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 AC106754.2-201ENST00000623006 233 ntBASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 AC100810.6-201ENST00000638068 285 ntBASIC1.09□□□□□ -2.23
CCDC50Q8IVM0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CCDC50Q8IVM0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CCDC50Q8IVM0 RNU6-222P-201ENST00000362438 107 ntBASIC1.08□□□□□ -2.24
CCDC50Q8IVM0 Y_RNA.179-201ENST00000363844 90 ntBASIC1.08□□□□□ -2.24
CCDC50Q8IVM0 Y_RNA.402-201ENST00000383972 102 ntBASIC1.08□□□□□ -2.24
CCDC50Q8IVM0 RN7SKP200-201ENST00000410564 320 ntBASIC1.08□□□□□ -2.24
CCDC50Q8IVM0 AL589823.1-201ENST00000429577 183 ntBASIC1.08□□□□□ -2.24
CCDC50Q8IVM0 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.08□□□□□ -2.24
CCDC50Q8IVM0 PGBD4P5-201ENST00000445958 426 ntBASIC1.08□□□□□ -2.24
CCDC50Q8IVM0 NDUFB4P10-201ENST00000452541 359 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms