Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RNU6-306P-201ENST00000384617 107 ntBASIC1.08□□□□□ -2.24
NUDCD3Q8IVD9 RNU6-541P-201ENST00000384709 110 ntBASIC1.08□□□□□ -2.24
NUDCD3Q8IVD9 RNU6-1031P-201ENST00000384773 107 ntBASIC1.08□□□□□ -2.24
NUDCD3Q8IVD9 RNU6-1186P-201ENST00000410429 97 ntBASIC1.08□□□□□ -2.24
NUDCD3Q8IVD9 Z83846.1-201ENST00000446798 265 ntBASIC1.08□□□□□ -2.24
NUDCD3Q8IVD9 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.08□□□□□ -2.24
NUDCD3Q8IVD9 AC093852.1-201ENST00000503587 266 ntBASIC1.08□□□□□ -2.24
NUDCD3Q8IVD9 RNU7-128P-201ENST00000517247 62 ntBASIC1.08□□□□□ -2.24
NUDCD3Q8IVD9 FRG2DP-202ENST00000566967 323 ntBASIC1.08□□□□□ -2.24
NUDCD3Q8IVD9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.08□□□□□ -2.24
NUDCD3Q8IVD9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.08□□□□□ -2.24
NUDCD3Q8IVD9 MIR3942-201ENST00000585264 109 ntBASIC1.08□□□□□ -2.24
NUDCD3Q8IVD9 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.08□□□□□ -2.24
NUDCD3Q8IVD9 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.08□□□□□ -2.24
NUDCD3Q8IVD9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 Y_RNA.100-201ENST00000363141 102 ntBASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 RNU6-17P-201ENST00000384245 107 ntBASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 RNU6-18P-201ENST00000384527 107 ntBASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 RNU6-950P-201ENST00000384651 107 ntBASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 RNU6-159P-201ENST00000391080 106 ntBASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 AP1B1P2-201ENST00000416196 106 ntBASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 DLGAP5P1-201ENST00000430307 464 ntBASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 MTATP6P13-201ENST00000438531 667 ntBASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 NDUFB4P10-201ENST00000452541 359 ntBASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 AL390123.1-201ENST00000603216 237 ntBASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 AL355802.3-201ENST00000607571 545 ntBASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 MIR8054-201ENST00000620877 86 ntBASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 AC090617.10-201ENST00000624308 134 ntBASIC1.07□□□□□ -2.24
NUDCD3Q8IVD9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 RNU6-137P-201ENST00000363680 108 ntBASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 RNU4-24P-201ENST00000364565 139 ntBASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 FGF7P8-201ENST00000402994 292 ntBASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 RPL37P10-201ENST00000412884 288 ntBASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 AC245047.3-201ENST00000429428 127 ntBASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 DYNLT3P2-201ENST00000442517 295 ntBASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 RN7SKP88-201ENST00000516847 250 ntBASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 AC109635.3-201ENST00000529536 185 ntBASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 MIR5696-201ENST00000578474 85 ntBASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 MIR3664-201ENST00000579074 99 ntBASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 AC022432.1-201ENST00000595739 310 ntBASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 7SK.8-201ENST00000612110 250 ntBASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 7SK.11-201ENST00000615477 250 ntBASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 MIR8065-201ENST00000620577 100 ntBASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 7SK.13-201ENST00000622040 250 ntBASIC1.06□□□□□ -2.24
NUDCD3Q8IVD9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.05□□□□□ -2.24
NUDCD3Q8IVD9 AL391987.6-201ENST00000305671 199 ntBASIC1.05□□□□□ -2.24
NUDCD3Q8IVD9 SNORA70.7-201ENST00000384159 133 ntBASIC1.05□□□□□ -2.24
NUDCD3Q8IVD9 RNU6-793P-201ENST00000384233 104 ntBASIC1.05□□□□□ -2.24
NUDCD3Q8IVD9 Y_RNA.533-201ENST00000384596 114 ntBASIC1.05□□□□□ -2.24
NUDCD3Q8IVD9 RN7SKP200-201ENST00000410564 320 ntBASIC1.05□□□□□ -2.24
NUDCD3Q8IVD9 AC243428.1-201ENST00000421099 264 ntBASIC1.05□□□□□ -2.24
NUDCD3Q8IVD9 MTND3P21-201ENST00000433774 331 ntBASIC1.05□□□□□ -2.24
NUDCD3Q8IVD9 AP000870.1-201ENST00000472927 406 ntBASIC1.05□□□□□ -2.24
NUDCD3Q8IVD9 RNU6-273P-201ENST00000516937 96 ntBASIC1.05□□□□□ -2.24
NUDCD3Q8IVD9 RNA5SP404-201ENST00000517118 132 ntBASIC1.05□□□□□ -2.24
NUDCD3Q8IVD9 AL137100.2-201ENST00000555786 315 ntBASIC1.05□□□□□ -2.24
NUDCD3Q8IVD9 MIR6078-201ENST00000611069 100 ntBASIC1.05□□□□□ -2.24
NUDCD3Q8IVD9 U6.73-201ENST00000619194 103 ntBASIC1.05□□□□□ -2.24
NUDCD3Q8IVD9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
NUDCD3Q8IVD9 RNU6-1266P-201ENST00000362794 105 ntBASIC1.04□□□□□ -2.24
NUDCD3Q8IVD9 RNU6-280P-201ENST00000364145 104 ntBASIC1.04□□□□□ -2.24
NUDCD3Q8IVD9 SNORA12.1-201ENST00000390873 148 ntBASIC1.04□□□□□ -2.24
NUDCD3Q8IVD9 RNU6-440P-201ENST00000390882 105 ntBASIC1.04□□□□□ -2.24
NUDCD3Q8IVD9 AL163540.1-201ENST00000485382 386 ntBASIC1.04□□□□□ -2.24
NUDCD3Q8IVD9 AC093534.1-201ENST00000504977 132 ntBASIC1.04□□□□□ -2.24
NUDCD3Q8IVD9 RNU7-40P-201ENST00000516397 64 ntBASIC1.04□□□□□ -2.24
NUDCD3Q8IVD9 AC134698.4-201ENST00000523451 826 ntBASIC1.04□□□□□ -2.24
NUDCD3Q8IVD9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.04□□□□□ -2.24
NUDCD3Q8IVD9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
NUDCD3Q8IVD9 Y_RNA.179-201ENST00000363844 90 ntBASIC1.03□□□□□ -2.24
NUDCD3Q8IVD9 Y_RNA.402-201ENST00000383972 102 ntBASIC1.03□□□□□ -2.24
NUDCD3Q8IVD9 MIR10B-201ENST00000385011 110 ntBASIC1.03□□□□□ -2.24
NUDCD3Q8IVD9 MRPL42P3-201ENST00000401492 326 ntBASIC1.03□□□□□ -2.24
NUDCD3Q8IVD9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.03□□□□□ -2.24
NUDCD3Q8IVD9 PGBD4P5-201ENST00000445958 426 ntBASIC1.03□□□□□ -2.24
NUDCD3Q8IVD9 MTND4P18-201ENST00000447010 465 ntBASIC1.03□□□□□ -2.24
NUDCD3Q8IVD9 RNU7-99P-201ENST00000516271 62 ntBASIC1.03□□□□□ -2.24
NUDCD3Q8IVD9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.03□□□□□ -2.24
NUDCD3Q8IVD9 AC004584.2-201ENST00000570407 410 ntBASIC1.03□□□□□ -2.24
NUDCD3Q8IVD9 MIR5695-201ENST00000579717 85 ntBASIC1.03□□□□□ -2.24
NUDCD3Q8IVD9 MIR4273-201ENST00000582824 84 ntBASIC1.03□□□□□ -2.24
NUDCD3Q8IVD9 7SK.7-201ENST00000603504 247 ntBASIC1.03□□□□□ -2.24
NUDCD3Q8IVD9 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
NUDCD3Q8IVD9 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
NUDCD3Q8IVD9 AC015540.1-201ENST00000615828 501 ntBASIC1.03□□□□□ -2.24
NUDCD3Q8IVD9 AC068647.2-201ENST00000637380 353 ntBASIC1.03□□□□□ -2.24
NUDCD3Q8IVD9 Y_RNA.405-201ENST00000383979 100 ntBASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 Y_RNA.451-201ENST00000384200 100 ntBASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 Y_RNA.524-201ENST00000384564 100 ntBASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 Y_RNA.561-201ENST00000384694 100 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms