Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.81□□□□□ -2.12
NUP54Q7Z3B4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.81□□□□□ -2.12
NUP54Q7Z3B4 RNU6-490P-201ENST00000362985 107 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 RNU4-73P-201ENST00000363164 141 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 Y_RNA.187-201ENST00000363918 113 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 SNORD87-201ENST00000364849 89 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 RNA5SP138-201ENST00000365098 114 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 RNU6-1040P-201ENST00000383974 107 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 MIR559-201ENST00000385188 96 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 MIR548B-201ENST00000385247 97 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 SNORA69.1-201ENST00000390904 137 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 Y_RNA.595-201ENST00000410403 105 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 AC060773.1-201ENST00000421698 310 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 snoU13.15-201ENST00000459407 104 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 RNU6-221P-201ENST00000459541 99 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 AC011406.1-201ENST00000512440 370 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 RNA5SP182-201ENST00000516064 82 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 RNVU1-2-201ENST00000516326 135 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 RNA5SP364-201ENST00000516938 78 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 AK6P2-201ENST00000549020 471 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 MIR3935-201ENST00000583472 104 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 AC087588.2-201ENST00000617667 426 ntBASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.8□□□□□ -2.12
NUP54Q7Z3B4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 RNU6-1145P-201ENST00000384246 107 ntBASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 SUMO2P12-201ENST00000405924 140 ntBASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 RNU6-57P-201ENST00000411348 103 ntBASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 AC114482.1-201ENST00000418010 247 ntBASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 AC008134.1-201ENST00000420943 193 ntBASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 AC099799.1-201ENST00000439809 192 ntBASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 U8.22-201ENST00000459141 133 ntBASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 UBL5P3-201ENST00000475112 231 ntBASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 RN7SKP49-201ENST00000516675 260 ntBASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 AC091144.1-201ENST00000519573 138 ntBASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 AC144568.1-201ENST00000520139 137 ntBASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 RAB11AP2-201ENST00000545905 639 ntBASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 MIR4285-201ENST00000581001 85 ntBASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 MIR4795-201ENST00000584182 89 ntBASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 AL117336.2-201ENST00000602435 335 ntBASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 AC073544.1-201ENST00000600110 1595 ntBASIC1.79□□□□□ -2.12
NUP54Q7Z3B4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.78□□□□□ -2.12
NUP54Q7Z3B4 RNU6-879P-201ENST00000364328 108 ntBASIC1.78□□□□□ -2.12
NUP54Q7Z3B4 MIR1261-201ENST00000408659 82 ntBASIC1.78□□□□□ -2.12
NUP54Q7Z3B4 MIR1185-2-201ENST00000408687 86 ntBASIC1.78□□□□□ -2.12
NUP54Q7Z3B4 Y_RNA.592-201ENST00000410274 109 ntBASIC1.78□□□□□ -2.12
NUP54Q7Z3B4 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.78□□□□□ -2.12
NUP54Q7Z3B4 AC025465.3-201ENST00000510570 311 ntBASIC1.78□□□□□ -2.12
NUP54Q7Z3B4 AC107393.1-201ENST00000512403 346 ntBASIC1.78□□□□□ -2.12
NUP54Q7Z3B4 RNU6-1041P-201ENST00000516254 102 ntBASIC1.78□□□□□ -2.12
NUP54Q7Z3B4 AC022868.1-201ENST00000517767 391 ntBASIC1.78□□□□□ -2.12
NUP54Q7Z3B4 AC025647.1-201ENST00000517879 253 ntBASIC1.78□□□□□ -2.12
NUP54Q7Z3B4 SUB1P4-201ENST00000566062 339 ntBASIC1.78□□□□□ -2.12
NUP54Q7Z3B4 MIR8074-201ENST00000615081 81 ntBASIC1.78□□□□□ -2.12
NUP54Q7Z3B4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.78□□□□□ -2.12
NUP54Q7Z3B4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
NUP54Q7Z3B4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
NUP54Q7Z3B4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.78□□□□□ -2.13
NUP54Q7Z3B4 RNU4-79P-201ENST00000362764 141 ntBASIC1.77□□□□□ -2.13
NUP54Q7Z3B4 Y_RNA.146-201ENST00000363549 102 ntBASIC1.77□□□□□ -2.13
NUP54Q7Z3B4 RNU6-867P-201ENST00000364956 107 ntBASIC1.77□□□□□ -2.13
NUP54Q7Z3B4 AL117342.1-201ENST00000404861 406 ntBASIC1.77□□□□□ -2.13
NUP54Q7Z3B4 RNA5SP338-201ENST00000410495 85 ntBASIC1.77□□□□□ -2.13
NUP54Q7Z3B4 AC022028.1-201ENST00000412054 408 ntBASIC1.77□□□□□ -2.13
NUP54Q7Z3B4 AF228730.4-201ENST00000421457 183 ntBASIC1.77□□□□□ -2.13
NUP54Q7Z3B4 MTND4P28-201ENST00000426217 387 ntBASIC1.77□□□□□ -2.13
NUP54Q7Z3B4 AL121890.1-201ENST00000435457 205 ntBASIC1.77□□□□□ -2.13
NUP54Q7Z3B4 AC099677.2-201ENST00000436385 175 ntBASIC1.77□□□□□ -2.13
NUP54Q7Z3B4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.77□□□□□ -2.13
NUP54Q7Z3B4 HMGN2P23-201ENST00000456759 269 ntBASIC1.77□□□□□ -2.13
NUP54Q7Z3B4 snoU13.26-201ENST00000459452 105 ntBASIC1.77□□□□□ -2.13
NUP54Q7Z3B4 AC105758.1-201ENST00000506038 399 ntBASIC1.77□□□□□ -2.13
NUP54Q7Z3B4 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.77□□□□□ -2.13
NUP54Q7Z3B4 AC074133.1-201ENST00000515696 183 ntBASIC1.77□□□□□ -2.13
NUP54Q7Z3B4 RNU6-1146P-201ENST00000516282 102 ntBASIC1.77□□□□□ -2.13
NUP54Q7Z3B4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.77□□□□□ -2.13
NUP54Q7Z3B4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 RNA5SP361-201ENST00000362686 118 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 RNU6-862P-201ENST00000362804 105 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 snoU2-30.2-201ENST00000362805 70 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 Y_RNA.58-201ENST00000362807 102 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 Y_RNA.154-201ENST00000363624 102 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 RNU4-42P-201ENST00000364738 142 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 RNU5E-4P-201ENST00000364931 120 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 RNY3P1-201ENST00000365085 102 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 RNY3-201ENST00000365484 102 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 Y_RNA.463-201ENST00000384271 102 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 RNU6-318P-201ENST00000384283 103 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 EBAG9P1-201ENST00000418955 543 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 MRPS18CP6-201ENST00000423587 223 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 CST2P1-201ENST00000425770 87 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 TOMM22P2-201ENST00000430735 237 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 UQCRBP2-201ENST00000447827 297 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms