Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-1.33□□□□□ -2.62
VPS13CQ709C8 AC138749.4-201ENST00000563970 127 ntBASIC-1.33□□□□□ -2.62
VPS13CQ709C8 AL162424.1-201ENST00000602325 221 ntBASIC-1.33□□□□□ -2.62
VPS13CQ709C8 MTATP6P27-201ENST00000416987 621 ntBASIC-1.34□□□□□ -2.62
VPS13CQ709C8 RPS24P1-201ENST00000438550 371 ntBASIC-1.34□□□□□ -2.62
VPS13CQ709C8 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.34□□□□□ -2.62
VPS13CQ709C8 AC034229.4-201ENST00000607861 441 ntBASIC-1.34□□□□□ -2.62
VPS13CQ709C8 SNORA22B-201ENST00000383876 138 ntBASIC-1.34□□□□□ -2.62
VPS13CQ709C8 AL121978.1-201ENST00000402778 359 ntBASIC-1.34□□□□□ -2.62
VPS13CQ709C8 SNORD38.3-201ENST00000516599 73 ntBASIC-1.34□□□□□ -2.62
VPS13CQ709C8 RNU6-678P-201ENST00000516832 109 ntBASIC-1.34□□□□□ -2.62
VPS13CQ709C8 RNU6-1183P-201ENST00000517054 60 ntBASIC-1.34□□□□□ -2.62
VPS13CQ709C8 MIR6851-201ENST00000617060 67 ntBASIC-1.34□□□□□ -2.62
VPS13CQ709C8 snoU2_19.1-201ENST00000362361 80 ntBASIC-1.34□□□□□ -2.62
VPS13CQ709C8 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.34□□□□□ -2.62
VPS13CQ709C8 AC015818.7-201ENST00000428754 109 ntBASIC-1.34□□□□□ -2.62
VPS13CQ709C8 AC087499.7-201ENST00000441958 109 ntBASIC-1.34□□□□□ -2.62
VPS13CQ709C8 OR6C5P-201ENST00000452388 923 ntBASIC-1.34□□□□□ -2.62
VPS13CQ709C8 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-1.34□□□□□ -2.62
VPS13CQ709C8 RNA5SP290-201ENST00000517133 127 ntBASIC-1.34□□□□□ -2.62
VPS13CQ709C8 RNU6-1210P-201ENST00000363775 107 ntBASIC-1.35□□□□□ -2.63
VPS13CQ709C8 SNORD41-201ENST00000386967 70 ntBASIC-1.35□□□□□ -2.63
VPS13CQ709C8 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.35□□□□□ -2.63
VPS13CQ709C8 AC105417.1-201ENST00000514691 285 ntBASIC-1.35□□□□□ -2.63
VPS13CQ709C8 MIR4742-201ENST00000581069 85 ntBASIC-1.35□□□□□ -2.63
VPS13CQ709C8 AC012213.4-201ENST00000606457 354 ntBASIC-1.35□□□□□ -2.63
VPS13CQ709C8 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.35□□□□□ -2.63
VPS13CQ709C8 SKA2P1-201ENST00000425592 390 ntBASIC-1.35□□□□□ -2.63
VPS13CQ709C8 RNU6-479P-201ENST00000516348 105 ntBASIC-1.35□□□□□ -2.63
VPS13CQ709C8 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-1.35□□□□□ -2.63
VPS13CQ709C8 U6.48-201ENST00000618523 106 ntBASIC-1.35□□□□□ -2.63
VPS13CQ709C8 DLEU2_6.3-201ENST00000340052 136 ntBASIC-1.35□□□□□ -2.63
VPS13CQ709C8 MIR518B-201ENST00000385127 83 ntBASIC-1.35□□□□□ -2.63
VPS13CQ709C8 RPL36P19-201ENST00000430744 301 ntBASIC-1.35□□□□□ -2.63
VPS13CQ709C8 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-1.35□□□□□ -2.63
VPS13CQ709C8 RNU6-319P-201ENST00000516025 108 ntBASIC-1.35□□□□□ -2.63
VPS13CQ709C8 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-1.35□□□□□ -2.63
VPS13CQ709C8 RPL21P9-201ENST00000556149 474 ntBASIC-1.35□□□□□ -2.63
VPS13CQ709C8 AC021851.1-201ENST00000608537 1082 ntBASIC-1.35□□□□□ -2.63
VPS13CQ709C8 AC004067.1-201ENST00000608733 700 ntBASIC-1.35□□□□□ -2.63
VPS13CQ709C8 DLEU2_6.2-201ENST00000620994 136 ntBASIC-1.35□□□□□ -2.63
VPS13CQ709C8 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 AL109755.1-201ENST00000401791 649 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 SNORA81-201ENST00000408493 178 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC-1.36□□□□□ -2.63
VPS13CQ709C8 AP000533.3-201ENST00000447704 118 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 RNU7-102P-201ENST00000458948 62 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-1.36□□□□□ -2.63
VPS13CQ709C8 AL096861.1-201ENST00000610899 123 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 RNU6-819P-201ENST00000364116 107 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 RNU6-1031P-201ENST00000384773 107 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 AC113420.1-201ENST00000507903 571 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 MRPS36P5-201ENST00000551909 298 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 ZNF299P-201ENST00000406845 1804 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 Y_RNA.597-201ENST00000410463 100 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 RPL23AP75-201ENST00000491601 451 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 RNU6-475P-201ENST00000516073 104 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 SNORD111.1-201ENST00000516421 86 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-1.36□□□□□ -2.63
VPS13CQ709C8 ZNF971P-201ENST00000562068 1249 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 AC144521.1-201ENST00000607148 956 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 AC063943.3-201ENST00000615562 356 ntBASIC-1.36□□□□□ -2.63
VPS13CQ709C8 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.37□□□□□ -2.63
VPS13CQ709C8 RNU6-726P-201ENST00000364680 107 ntBASIC-1.37□□□□□ -2.63
VPS13CQ709C8 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.37□□□□□ -2.63
VPS13CQ709C8 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC-1.37□□□□□ -2.63
VPS13CQ709C8 MTND2P7-201ENST00000521337 640 ntBASIC-1.37□□□□□ -2.63
VPS13CQ709C8 AC010525.2-201ENST00000590920 195 ntBASIC-1.37□□□□□ -2.63
VPS13CQ709C8 AL929325.1-201ENST00000603096 117 ntBASIC-1.37□□□□□ -2.63
VPS13CQ709C8 AC079416.3-201ENST00000624479 549 ntBASIC-1.37□□□□□ -2.63
VPS13CQ709C8 MIR664B-201ENST00000626756 61 ntBASIC-1.37□□□□□ -2.63
VPS13CQ709C8 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.37□□□□□ -2.63
VPS13CQ709C8 AC111193.1-201ENST00000504097 155 ntBASIC-1.37□□□□□ -2.63
VPS13CQ709C8 AL355598.1-201ENST00000604169 202 ntBASIC-1.37□□□□□ -2.63
VPS13CQ709C8 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-1.37□□□□□ -2.63
VPS13CQ709C8 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.37□□□□□ -2.63
VPS13CQ709C8 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-1.37□□□□□ -2.63
VPS13CQ709C8 AKIRIN2P1-201ENST00000505898 352 ntBASIC-1.37□□□□□ -2.63
VPS13CQ709C8 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.37□□□□□ -2.63
VPS13CQ709C8 MIR4771-2-201ENST00000577758 74 ntBASIC-1.37□□□□□ -2.63
VPS13CQ709C8 MIR4771-1-201ENST00000582617 74 ntBASIC-1.37□□□□□ -2.63
VPS13CQ709C8 AL450472.1-202ENST00000637286 180 ntBASIC-1.37□□□□□ -2.63
VPS13CQ709C8 RNU6-343P-201ENST00000364709 104 ntBASIC-1.38□□□□□ -2.63
VPS13CQ709C8 UBE2D3P3-201ENST00000426992 425 ntBASIC-1.38□□□□□ -2.63
VPS13CQ709C8 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-1.38□□□□□ -2.63
VPS13CQ709C8 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-1.38□□□□□ -2.63
VPS13CQ709C8 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-1.38□□□□□ -2.63
VPS13CQ709C8 POLR2KP1-201ENST00000553226 168 ntBASIC-1.38□□□□□ -2.63
VPS13CQ709C8 AC122133.1-201ENST00000613964 233 ntBASIC-1.38□□□□□ -2.63
VPS13CQ709C8 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-1.38□□□□□ -2.63
VPS13CQ709C8 RNU6-655P-201ENST00000362858 107 ntBASIC-1.38□□□□□ -2.63
VPS13CQ709C8 RNA5SP48-201ENST00000363969 126 ntBASIC-1.38□□□□□ -2.63
VPS13CQ709C8 MIR215-201ENST00000384858 110 ntBASIC-1.38□□□□□ -2.63
VPS13CQ709C8 MTCO3P41-201ENST00000414801 328 ntBASIC-1.38□□□□□ -2.63
VPS13CQ709C8 RNU6-1041P-201ENST00000516254 102 ntBASIC-1.38□□□□□ -2.63
VPS13CQ709C8 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC-1.38□□□□□ -2.63
VPS13CQ709C8 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-1.38□□□□□ -2.63
VPS13CQ709C8 RNU6-364P-201ENST00000384387 107 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms