Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 AC006461.1-201ENST00000412637 326 ntBASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 AL161651.1-201ENST00000440882 223 ntBASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 RNU5F-2P-201ENST00000516066 82 ntBASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 RNU6-1007P-201ENST00000516586 107 ntBASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 RNU6-107P-201ENST00000516643 102 ntBASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 SNRPGP20-201ENST00000604477 205 ntBASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 AC110079.1-202ENST00000635213 138 ntBASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 ZNF702P-202ENST00000434269 1966 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 AC073325.2-201ENST00000339545 159 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 RNU6-969P-201ENST00000383900 105 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 Y_RNA.525-201ENST00000384570 113 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 Y_RNA.563-201ENST00000384707 108 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 MIR616-201ENST00000385293 97 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 MT-TT-201ENST00000387460 66 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 RNU6-750P-201ENST00000390946 107 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 AL355497.1-201ENST00000406262 551 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 RNA5SP504-201ENST00000410676 117 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 AC108938.1-201ENST00000451204 136 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 AL109933.2-201ENST00000452651 260 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 AC091179.1-201ENST00000461606 579 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 AIG1P1-201ENST00000503376 148 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 YWHAEP4-201ENST00000505390 198 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 PDCD5P2-201ENST00000507570 312 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 RAC1P5-201ENST00000512182 576 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 RNU6-561P-201ENST00000516222 102 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 SNORD19.2-201ENST00000516978 73 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 AC093331.1-201ENST00000521474 169 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 AC107294.3-201ENST00000609211 526 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 Y_RNA.802-201ENST00000614892 130 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 TUG1_4.1-201ENST00000619464 181 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 AC009487.2-201ENST00000420969 6821 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 AC010889.1-201ENST00000566193 2666 ntBASIC3.25□□□□□ -1.89
CNKSR3Q6P9H4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 MIR30E-201ENST00000362104 92 ntBASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 RNU4-82P-201ENST00000362443 140 ntBASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 RNU6-407P-201ENST00000365280 104 ntBASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 AC063976.3-201ENST00000426849 329 ntBASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 AC012308.1-201ENST00000451232 178 ntBASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 AC245047.8-201ENST00000456455 284 ntBASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 RPL23AP70-201ENST00000483361 460 ntBASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 AC115990.1-201ENST00000526957 301 ntBASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 AC011603.4-201ENST00000611325 277 ntBASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 AC012640.5-201ENST00000623897 319 ntBASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CNKSR3Q6P9H4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 Y_RNA.243-201ENST00000364481 109 ntBASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 RNU6-19P-201ENST00000384718 107 ntBASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 RNY4P18-201ENST00000391107 89 ntBASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 RNA5SP201-201ENST00000410316 124 ntBASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 CYCSP48-201ENST00000417124 323 ntBASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 AC087499.2-201ENST00000432861 149 ntBASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 RNU7-107P-201ENST00000459121 61 ntBASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 RPS29P12-201ENST00000460178 152 ntBASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 AC006483.1-201ENST00000487308 313 ntBASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 MIR3923-201ENST00000579521 83 ntBASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 MIR3136-201ENST00000583498 78 ntBASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 AC104984.5-201ENST00000586878 94 ntBASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 UCA1.1-201ENST00000620952 75 ntBASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 AC002543.1-201ENST00000299783 1954 ntBASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CNKSR3Q6P9H4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 Y_RNA.310-201ENST00000365063 113 ntBASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 Y_RNA.368-201ENST00000365547 113 ntBASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 RNU6-1056P-201ENST00000383996 107 ntBASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 RNU6-768P-201ENST00000384683 107 ntBASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 MIR526A2-201ENST00000390198 65 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms